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Sequence analysis of the emerging SARS‐CoV‐2 variant Omicron in South Africa

https://doi.org/10.1002/jmv.27516
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14/14 checkable references clean · checked 2026-07-23

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

7 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

The 14 checked references that resolve
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From SARS to MERS, Thrusting Coronaviruses into the Spotlight
resolves10.1038/s41579-018-0118-9
Origin and evolution of pathogenic coronaviruses
resolves10.1016/j.chom.2020.02.001
Genome Composition and Divergence of the Novel Coronavirus (2019-nCoV) Originating in China
resolves10.1016/j.meegid.2018.03.028
Predicting the receptor-binding domain usage of the coronavirus based on kmer frequency on spike protein
resolves10.1146/annurev-virology-110615-042301
Structure, Function, and Evolution of Coronavirus Spike Proteins
resolves10.1002/gch2.1018
Data, disease and diplomacy: GISAID's innovative contribution to global health
resolves10.1093/bioinformatics/bty407
Nextstrain: real-time tracking of pathogen evolution
resolves10.1016/j.chom.2021.02.017
One year of SARS-CoV-2 evolution
resolves10.1038/s41598-018-34171-7
Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis
resolves10.1016/j.cell.2020.07.012
The Impact of Mutations in SARS-CoV-2 Spike on Viral Infectivity and Antigenicity
resolves10.1016/j.celrep.2021.108915
Linear epitope landscape of the SARS-CoV-2 Spike protein constructed from 1,051 COVID-19 patients
resolves10.1039/D1SC01203G
Prediction and mitigation of mutation threats to COVID-19 vaccines and antibody therapies
resolves10.1038/s41579-021-00573-0
SARS-CoV-2 variants, spike mutations and immune escape
resolves10.1016/j.chom.2020.11.007
Complete Mapping of Mutations to the SARS-CoV-2 Spike Receptor-Binding Domain that Escape Antibody Recognition
The 7 references without a DOI — listed, not checked
no DOI — not checkedWHO Coronavirus (COVID‐19)Dashboard. World Health Organization.https://covid19.who.int/
no DOI — not checkedCDC. Omicron Variant: What You Need to Know.https://www.cdc.gov/coronavirus/2019-ncov/variants/omicron-variant.html
no DOI — not checkedHodcroftEB.2021. CoVariants: SARS‐CoV‐2 mutations and variants of interest.https://covariants.org/
no DOI — not checkedSARS‐CoV‐2 501Y.V2 escapes neutralization by South African COVID‐19 donor plasma
no DOI — not checkedDeep mutational scanning of SARS‐CoV‐2 receptor binding domain reveals constraints on folding and ACE2 binding
no DOI — not checkedComprehensive mapping of mutations to the SARS‐CoV‐2 receptor‐binding domain that affect recognition by polyclonal human serum antibodies
no DOI — not checkedIncreased resistance of SARS‐CoV‐2 variants B.1.351 and B.1.1.7 to antibody neutralization
What this badge says. CiteStamped means the CHECKABLE references of this work were clean at the dated check: each resolved to a known work in a public registry, and none carried a retraction notice at that time. It says nothing about the quality, findings, or importance of the work itself, and nothing about references deposited without a DOI.

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