Every reference with a DOI in the deposited reference list resolved to a known
work in Crossref or DataCite at the dated check, and none carried a retraction,
withdrawal, or removal notice.
The 159 checked references that resolve
resolves10.1073/pnas.1507245112Oligoribonuclease is the primary degradative enzyme for pGpG in
<i>Pseudomonas aeruginosa</i>
that is required for cyclic-di-GMP turnover
resolves10.1073/pnas.1421450112Oligoribonuclease is a central feature of cyclic diguanylate signaling in
<i>Pseudomonas aeruginosa</i>
resolves10.1074/jbc.M116.747709New Insights into the Cyclic Di-adenosine Monophosphate (c-di-AMP) Degradation Pathway and the Requirement of the Cyclic Dinucleotide for Acid Stress Resistance in Staphylococcus aureus
resolves10.1128/JB.00168-10<i>In V</i>
<i>itro</i>
and
<i>In V</i>
<i>ivo</i>
Characterization of the
<i>Pseudomonas aeruginosa</i>
Cyclic AMP (cAMP) Phosphodiesterase CpdA, Required for cAMP Homeostasis and Virulence Factor Regulation
resolves10.1128/JB.00049-16Vfr Directly Activates
<i>exsA</i>
Transcription To Regulate Expression of the Pseudomonas aeruginosa Type III Secretion System
resolves10.1128/IAI.72.3.1677-1684.2004An Adenylate Cyclase-Controlled Signaling Network Regulates
<i>Pseudomonas aeruginosa</i>
Virulence in a Mouse Model of Acute Pneumonia
resolves10.1086/591861Antimicrobial-Resistant Pathogens Associated With Healthcare-Associated Infections: Annual Summary of Data Reported to the National Healthcare Safety Network at the Centers for Disease Control and Prevention, 2006–2007
resolves10.1074/jbc.R115.711507Biofilms and Cyclic di-GMP (c-di-GMP) Signaling: Lessons from Pseudomonas aeruginosa and Other Bacteria
resolves10.1073/pnas.0511090103Analysis of
<i>Pseudomonas aeruginosa</i>
diguanylate cyclases and phosphodiesterases reveals a role for bis-(3′-5′)-cyclic-GMP in virulence
resolves10.1111/j.1365-2958.2007.05817.xThe second messenger bis‐(3′‐5′)‐cyclic‐GMP and its PilZ domain‐containing receptor Alg44 are required for alginate biosynthesis in <i>Pseudomonas aeruginosa</i>
resolves10.1128/JB.00539-15FleQ DNA Binding Consensus Sequence Revealed by Studies of FleQ-Dependent Regulation of Biofilm Gene Expression in Pseudomonas aeruginosa
resolves10.1073/pnas.1523148113Mechanistic insights into c-di-GMP–dependent control of the biofilm regulator FleQ from
<i>Pseudomonas aeruginosa</i>
resolves10.1073/pnas.1318972110Cyclic diguanosine monophosphate represses bacterial flagella synthesis by interacting with the Walker A motif of the enhancer-binding protein FleQ
resolves10.1074/jbc.M112.378273Structures of the PelD Cyclic Diguanylate Effector Involved in Pellicle Formation in Pseudomonas aeruginosa PAO1
resolves10.1074/jbc.M112.375378Structure of the Cytoplasmic Region of PelD, a Degenerate Diguanylate Cyclase Receptor That Regulates Exopolysaccharide Production in Pseudomonas aeruginosa
resolves10.1074/jbc.M116.730887A Cyclic di-GMP-binding Adaptor Protein Interacts with Histidine Kinase to Regulate Two-component Signaling
resolves10.1038/nmicrobiol.2017.27Cyclic-di-GMP regulates lipopolysaccharide modification and contributes to Pseudomonas aeruginosa immune evasion
resolves10.1111/mmi.12562<scp>BrlR</scp> from <scp><i>P</i></scp><i>seudomonas aeruginosa</i> is a c‐di‐<scp>GMP</scp>‐responsive transcription factor
resolves10.1126/scisignal.aaf7584A cyclic di-GMP–binding adaptor protein interacts with a chemotaxis methyltransferase to control flagellar motor switching
resolves10.1128/JB.00196-16PilZ Domain Protein FlgZ Mediates Cyclic Di-GMP-Dependent Swarming Motility Control in Pseudomonas aeruginosa
resolves10.1128/JB.00119-09<i>Pseudomonas aeruginosa</i>
Rugose Small-Colony Variants Have Adaptations That Likely Promote Persistence in the Cystic Fibrosis Lung
resolves10.1038/nm1028Increased airway epithelial Na+ absorption produces cystic fibrosis-like lung disease in mice
resolves10.1371/journal.ppat.1002760The YfiBNR Signal Transduction Mechanism Reveals Novel Targets for the Evolution of Persistent Pseudomonas aeruginosa in Cystic Fibrosis Airways
resolves10.1128/IAI.00332-13Clearance of Pseudomonas aeruginosa Foreign-Body Biofilm Infections through Reduction of the Cyclic Di-GMP Level in the Bacteria
resolves10.1128/JB.00410-15Cyclic Di-GMP Signaling Contributes to Pseudomonas aeruginosa-Mediated Catheter-Associated Urinary Tract Infection
resolves10.1128/AEM.00299-14Deletion Mutant Library for Investigation of Functional Outputs of Cyclic Diguanylate Metabolism in Pseudomonas aeruginosa PA14
resolves10.1128/IAI.00057-11Direct Evaluation of Pseudomonas aeruginosa Biofilm Mediators in a Chronic Infection Model
resolves10.1046/j.1462-2920.2003.00542.x<i>In vivo</i>
functional genomics of
<i>Pseudomonas aeruginosa</i>
for high‐throughput screening of new virulence factors and antibacterial targets
resolves10.1128/mBio.00864-17Psl Produced by Mucoid
<i>Pseudomonas aeruginosa</i>
Contributes to the Establishment of Biofilms and Immune Evasion
resolves10.1128/JB.00619-08The Pangenome Structure of<i>Escherichia coli</i>: Comparative Genomic Analysis of<i>E. coli</i>Commensal and Pathogenic Isolates
resolves10.1128/JB.00520-15Genome-Based Comparison of Cyclic Di-GMP Signaling in Pathogenic and Commensal Escherichia coli Strains
resolves10.1038/325279a0Regulation of cellulose synthesis in Acetobacter xylinum by cyclic diguanylic acid
resolves10.1111/mmi.12672<scp>GIL</scp>, a new c‐di‐<scp>GMP</scp>‐binding protein domain involved in regulation of cellulose synthesis in enterobacteria
resolves10.1016/j.molcel.2010.03.001The c-di-GMP Binding Protein YcgR Controls Flagellar Motor Direction and Speed to Affect Chemotaxis by a “Backstop Brake” Mechanism
resolves10.1038/nsmb.2803Mechanism of activation of bacterial cellulose synthase by cyclic di-GMP
resolves10.1038/emboj.2012.315Allosteric activation of exopolysaccharide synthesis through cyclic di‐GMP‐stimulated protein–protein interaction
resolves10.1101/gad.475808Inverse regulatory coordination of motility and curli-mediated adhesion in <i>Escherichia coli</i>
resolves10.1128/IAI.01396-12Genetic Analysis of the Role of
<i>yfiR</i>
in the Ability of Escherichia coli CFT073 To Control Cellular Cyclic Dimeric GMP Levels and To Persist in the Urinary Tract
resolves10.1128/mBio.00307-12Enzymatically Active and Inactive Phosphodiesterases and Diguanylate Cyclases Are Involved in Regulation of Motility or Sessility in Escherichia coli CFT073
resolves10.1128/IAI.00919-12Transcriptional Modulation of Enterotoxigenic Escherichia coli Virulence Genes in Response to Epithelial Cell Interactions
resolves10.15252/emmm.201404309Cyclic‐di‐GMP signalling and biofilm‐related properties of the Shiga toxin‐producing 2011 German outbreak Escherichia coli O104:H4
resolves10.1186/1471-2180-12-139Comparative analysis of diguanylate cyclase and phosphodiesterase genes in Klebsiella pneumoniae
resolves10.1128/IAI.01523-08Genetic Requirements for
<i>Klebsiella pneumoniae</i>
-Induced Liver Abscess in an Oral Infection Model
resolves10.1128/jb.171.3.1262-1270.1989Identification and characterization of the genes encoding the type 3 and type 1 fimbrial adhesins of Klebsiella pneumoniae
resolves10.1128/IAI.69.9.5805-5812.2001Type 3 Fimbrial Shaft (MrkA) of
<i>Klebsiella pneumoniae</i>
, but Not the Fimbrial Adhesin (MrkD), Facilitates Biofilm Formation
resolves10.1371/journal.ppat.1002204MrkH, a Novel c-di-GMP-Dependent Transcriptional Activator, Controls Klebsiella pneumoniae Biofilm Formation by Regulating Type 3 Fimbriae Expression
resolves10.1128/JB.00286-11Type 3 Fimbriae and Biofilm Formation Are Regulated by the Transcriptional Regulators MrkHI in Klebsiella pneumoniae
resolves10.1371/journal.pone.0079038Transcriptional Activation of the mrkA Promoter of the Klebsiella pneumoniae Type 3 Fimbrial Operon by the c-di-GMP-Dependent MrkH Protein
resolves10.1128/JB.00304-10Role of MrkJ, a Phosphodiesterase, in Type 3 Fimbrial Expression and Biofilm Formation in
<i>Klebsiella pneumoniae</i>
resolves10.1371/journal.pone.0066740YjcC, a c-di-GMP Phosphodiesterase Protein, Regulates the Oxidative Stress Response and Virulence of Klebsiella pneumoniae CG43
resolves10.1128/IAI.71.7.4151-4158.2003Production of Cellulose and Curli Fimbriae by Members of the Family
<i>Enterobacteriaceae</i>
Isolated from the Human Gastrointestinal Tract
resolves10.1083/jcb.200207120Unfolded cholera toxin is transferred to the ER membrane and released from protein disulfide isomerase upon oxidation by Ero1
resolves10.1073/pnas.75.7.3050ADP-ribosylation of membrane proteins catalyzed by cholera toxin: basis of the activation of adenylate cyclase.
resolves10.1073/pnas.75.6.2669Mechanism of cholera toxin action: Covalent modification of the guanyl nucleotide-binding protein of the adenylate cyclase system
resolves10.1126/science.7524148Cystic Fibrosis Heterozygote Resistance to Cholera Toxin in the Cystic Fibrosis Mouse Model
resolves10.1046/j.1365-2958.2003.03423.xInteractions of the quorum sensing regulator QscR: interaction with itself and the other regulators of <i>Pseudomonas aeruginosa</i> LasR and RhlR
resolves10.1126/science.1181185<i>Vibrio cholerae</i>
VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP
resolves10.1128/JB.05167-11Integration of Cyclic di-GMP and Quorum Sensing in the Control of
<i>vpsT</i>
and
<i>aphA</i>
in Vibrio cholerae
resolves10.1111/mmi.12432Cyclic di‐<scp>GMP</scp> inhibits <i><scp>V</scp>ibrio cholerae</i> motility by repressing induction of transcription and inducing extracellular polysaccharide production
resolves10.1371/journal.ppat.1005232Systematic Identification of Cyclic-di-GMP Binding Proteins in Vibrio cholerae Reveals a Novel Class of Cyclic-di-GMP-Binding ATPases Associated with Type II Secretion Systems
resolves10.1371/journal.ppat.1005068C-di-GMP Regulates Motile to Sessile Transition by Modulating MshA Pili Biogenesis and Near-Surface Motility Behavior in Vibrio cholerae
resolves10.1128/AEM.69.9.5711-5715.2003Role for Mannose-Sensitive Hemagglutinin in Promoting Interactions between
<i>Vibrio cholerae</i>
El Tor and Mussel Hemolymph
resolves10.1073/pnas.0913404107Quorum-regulated biofilms enhance the development of conditionally viable, environmental
<i>Vibrio cholerae</i>
resolves10.1073/pnas.0409559102Bile acids induce cholera toxin expression in
<i>Vibrio cholerae</i>
in a ToxT-independent manner
resolves10.1016/j.chom.2007.09.004Genes Induced Late in Infection Increase Fitness of Vibrio cholerae after Release into the Environment
resolves10.1111/1462-2920.12799Temperature affects c‐di‐
<scp>GMP</scp>
signalling and biofilm formation in
<scp>
<i>V</i>
</scp>
<i>ibrio cholerae</i>
resolves10.1128/CMR.00066-12Salmonella enterica Serovar Typhimurium Skills To Succeed in the Host: Virulence and Regulation
resolves10.1111/j.1365-2958.2006.05123.xHierarchical involvement of various GGDEF domain proteins in rdar morphotype development of <i>Salmonella enterica</i> serovar Typhimurium
resolves10.1371/journal.pone.0028351Complex c-di-GMP Signaling Networks Mediate Transition between Virulence Properties and Biofilm Formation in Salmonella enterica Serovar Typhimurium
resolves10.1128/JB.00290-09A Role for the EAL-Like Protein STM1344 in Regulation of CsgD Expression and Motility in<i>Salmonella enterica</i>Serovar Typhimurium
resolves10.1128/JB.01719-06Role of EAL-Containing Proteins in Multicellular Behavior of<i>Salmonella enterica</i>Serovar Typhimurium
resolves10.1111/1462-2920.12580Dissecting the cyclic di‐guanylate monophosphate signalling network regulating motility in
<i>
<scp>S</scp>
almonella enterica
</i>
serovar
<scp>T</scp>
yphimurium
resolves10.1111/mmi.12066The response threshold of <i><scp>S</scp>almonella</i><scp><scp>PilZ</scp></scp> domain proteins is determined by their binding affinities for c‐di‐<scp>GMP</scp>
resolves10.1186/s12934-016-0576-6BcsZ inhibits biofilm phenotypes and promotes virulence by blocking cellulose production in Salmonella enterica serovar Typhimurium
resolves10.1186/s12866-017-0934-5Detailed analysis of c-di-GMP mediated regulation of csgD expression in Salmonella typhimurium
resolves10.1111/j.1462-2920.2009.02032.xCyclic di‐GMP signalling controls virulence properties of
<i>Salmonella enterica</i>
serovar Typhimurium at the mucosal lining
resolves10.1111/j.1365-2958.2005.04632.xA glutamate‐alanine‐leucine (EAL) domain protein of
<i>Salmonella</i>
controls bacterial survival in mice, antioxidant defence and killing of macrophages: role of cyclic diGMP
resolves10.1128/IAI.00137-15Bistable Expression of CsgD in Salmonella enterica Serovar Typhimurium Connects Virulence to Persistence
resolves10.1128/IAI.00532-16Salmonella Extracellular Matrix Components Influence Biofilm Formation and Gallbladder Colonization
resolves10.1017/ice.2014.88Risk Factors for Recurrent <i>Clostridium difficile</i> Infection: A Systematic Review and Meta-Analysis
resolves10.1016/j.lfs.2012.11.017Clostridium difficile flagellin stimulates toll-like receptor 5, and toxin B promotes flagellin-induced chemokine production via TLR5
resolves10.1371/journal.pone.0081306Identification of a Novel Zinc Metalloprotease through a Global Analysis of Clostridium difficile Extracellular Proteins
resolves10.1074/mcp.M113.034728A Novel Secreted Metalloprotease (CD2830) from Clostridium difficile Cleaves Specific Proline Sequences in LPXTG Cell Surface Proteins
resolves10.1074/jbc.M115.665091Cyclic diGMP Regulates Production of Sortase Substrates of Clostridium difficile and Their Surface Exposure through ZmpI Protease-mediated Cleavage
resolves10.1128/JB.00100-12Cyclic Diguanylate Inversely Regulates Motility and Aggregation in Clostridium difficile
resolves10.1128/JB.00501-13The Second Messenger Cyclic Di-GMP Regulates Clostridium difficile Toxin Production by Controlling Expression of
<i>sigD</i>
resolves10.1128/IAI.00224-12Modulation of Toxin Production by the Flagellar Regulon in Clostridium difficile
resolves10.1371/journal.pone.0083748Characterization of the SigD Regulon of C. difficile and Its Positive Control of Toxin Production through the Regulation of tcdR
resolves10.1128/JB.02340-14Cyclic Di-GMP Riboswitch-Regulated Type IV Pili Contribute to Aggregation of Clostridium difficile
resolves10.1128/JB.00034-17Cyclic Di-GMP Binding by an Assembly ATPase (PilB2) and Control of Type IV Pilin Polymerization in the Gram-Positive Pathogen Clostridium perfringens
resolves10.1126/science.273.5273.367Role of the
<b>
<i>Yersinia pestis</i>
</b>
Hemin Storage (
<b>
<i>hms</i>
</b>
) Locus in the Transmission of Plague by Fleas
resolves10.1111/j.1365-2958.2010.07470.xSystematic analysis of cyclic di‐GMP signalling enzymes and their role in biofilm formation and virulence in
<i>Yersinia pestis</i>
resolves10.1371/journal.pone.0019267Differential Control of Yersinia pestis Biofilm Formation In Vitro and in the Flea Vector by Two c-di-GMP Diguanylate Cyclases
resolves10.1111/j.1365-2958.2004.04253.xHmsP, a putative phosphodiesterase, and HmsT, a putative diguanylate cyclase, control Hms‐dependent biofilm formation in <i>Yersinia pestis</i>
resolves10.1016/j.femsle.2005.04.036The phosphodiesterase activity of the HmsP EAL domain is required for negative regulation of biofilm formation in<i>Yersinia pestis</i>
resolves10.3389/fcimb.2014.00056The cyclic-di-GMP signaling pathway in the Lyme disease spirochete, Borrelia burgdorferi
resolves10.1128/JB.187.5.1792-1798.2005Cyclic Diguanylate Is a Ubiquitous Signaling Molecule in Bacteria: Insights into Biochemistry of the GGDEF Protein Domain
resolves10.1111/j.1365-2958.2010.07191.xAnalysis of a <i>Borrelia burgdorferi</i> phosphodiesterase demonstrates a role for cyclic‐di‐guanosine monophosphate in motility and virulence
resolves10.1128/IAI.05153-11Analysis of the HD-GYP Domain Cyclic Dimeric GMP Phosphodiesterase Reveals a Role in Motility and the Enzootic Life Cycle of Borrelia burgdorferi
resolves10.1111/j.1574-695X.2009.00635.xIdentification and molecular characterization of a cyclic-di-GMP effector protein, PlzA (BB0733): additional evidence for the existence of a functional cyclic-di-GMP regulatory network in the Lyme disease spirochete,<i>Borrelia burgdorferi</i>
resolves10.1128/IAI.00075-11Analysis of the Borrelia burgdorferi Cyclic-di-GMP-Binding Protein PlzA Reveals a Role in Motility and Virulence
resolves10.1128/IAI.00315-15Cyclic di-GMP Modulates Gene Expression in Lyme Disease Spirochetes at the Tick-Mammal Interface To Promote Spirochete Survival during the Blood Meal and Tick-to-Mammal Transmission
resolves10.1128/IAI.05136-11The Hybrid Histidine Kinase Hk1 Is Part of a Two-Component System That Is Essential for Survival of Borrelia burgdorferi in Feeding Ixodes scapularis Ticks
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