Reference health
High Throughput Sequencing: An Overview of Sequencing Chemistry
40/40 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
6 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 40 checked references that resolve
resolves10.1186/1471-2164-13-341
A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers
resolves10.1016/j.copbio.2011.11.013
Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
resolves10.1007/s10482-012-9821-0
Barcoded pyrosequencing analysis of the microbial community in a simulator of the human gastrointestinal tract showed a colon region-specific microbiota modulation for two plant-derived polysaccharide blends
resolves10.1371/journal.pone.0030619
NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data
resolves10.1038/ismej.2011.159
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
resolves10.1007/978-1-61779-089-8_17
Preparation of Next-Generation Sequencing Libraries Using Nextera™ Technology: Simultaneous DNA Fragmentation and Adaptor Tagging by In Vitro Transposition
resolves10.1371/journal.pone.0028240
Systematic Comparison of Three Methods for Fragmentation of Long-Range PCR Products for Next Generation Sequencing
resolves10.1101/gr.124016.111
Preparation of high-quality next-generation sequencing libraries from picogram quantities of target DNA
resolves10.1038/ismej.2013.59
Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes
resolves10.1038/ismej.2010.189
Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean
resolves10.1038/ismej.2012.63
The metatranscriptome of a deep-sea hydrothermal plume is dominated by water column methanotrophs and lithotrophs
resolves10.1371/journal.pone.0024910
Emulsion PCR: A High Efficient Way of PCR Amplification of Random DNA Libraries in Aptamer Selection
resolves10.1186/2041-2223-2-23
Next-generation sequencing technologies and applications for human genetic history and forensics
resolves10.1089/ten.tec.2011.0304
Validation of a PicoGreen-Based DNA Quantification Integrated in an RNA Extraction Method for Two-Dimensional and Three-Dimensional Cell Cultures
resolves10.1371/journal.pone.0076925
Application of Genotyping-by-Sequencing on Semiconductor Sequencing Platforms: A Comparison of Genetic and Reference-Based Marker Ordering in Barley
resolves10.4172/jpb.1000342
Efficiency of Corynebacterium pseudotuberculosis Cp31 Genome Assembly with the Hi-Q Enzyme on an Ion Torrent PGM Sequencing Platform
resolves10.1039/c2cs35286a
Single molecule sensing with solid-state nanopores: novel materials, methods, and applications
resolves10.1016/j.bdq.2015.02.001
Assessing the performance of the Oxford Nanopore Technologies MinION
resolves10.1371/journal.pone.0066621
Coverage Bias and Sensitivity of Variant Calling for Four Whole-genome Sequencing Technologies
resolves10.1155/2016/4169587
Transcriptome Profile of the Asian Giant Hornet (<i>Vespa mandarinia</i>) Using Illumina HiSeq 4000 Sequencing:<i>De Novo</i>Assembly, Functional Annotation, and Discovery of SSR Markers
The 6 references without a DOI — listed, not checked
no DOI — not checkedKawashima Eric H, Laurent Farinelli; Pascal Mayer (2005-05-12). ”Patent: Method of nucleic acid amplification”. Retrieved 2012-12-22
no DOI — not checkedFakruddin M, Chowdhury A, Hossain M, Mannan KSB, Mazumdar RM (2012) Pyrosequencing-principles and applications. Life 50:65
no DOI — not checkedhttp://www.illumina.com/technology/next-generation-sequencing/paired-end-sequencing_assay.html
no DOI — not checkedMeldrum C, Doyle MR, Tothill RW (2011) Next-Generation Sequencing for Cancer Diagnostics: a Practical Perspective. Clin Biochem Rev 32:177–195. PMCID: PMC3219767
no DOI — not checkedhttp://nextgenseek.com/2012/07/complete-genomics-new-technology-to-produce-accurate-sequencing-with-small-amount-of-dna/
no DOI — not checkedBasu A, Macosko E, Shalek A, McCarroll S, Regev A, and Weitz D (2014) Single-cell genomics using droplet-based microfuidics. Bull Am Phys Soc: APS March Meeting 2014 59:3–7, Denver, Colorado
What this badge says. CiteStamped means the CHECKABLE references of this
work were clean at the dated check: each resolved to a known work in a public registry, and none
carried a retraction notice at that time. It says nothing about the quality, findings,
or importance of the work itself, and nothing about references deposited without a DOI.
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