Reference health
The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts
12 of 139 checkable references need attention · checked 2026-08-07
At the dated check, the references listed below either did not resolve in Crossref or DataCite, or carried a retraction notice. Each one is shown with the registry record that put it there.
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References needing attention
does not resolve to a known work10.2307/3759160
does not resolve to a known work10.2307/3759283
does not resolve to a known work10.2307/3760397
does not resolve to a known work10.2307/3761867
does not resolve to a known work10.2307/3760327
does not resolve to a known work10.2307/3761606
does not resolve to a known work10.2307/3761452
does not resolve to a known work10.3852/mycologia.98.6.1041
does not resolve to a known work10.2307/3760675
does not resolve to a known work10.2307/3761193
does not resolve to a known work10.2307/3761657
does not resolve to a known work10.3852/mycologia.98.6.1076
The 127 checked references that resolve
resolves10.1111/j.1469-8137.2009.03160.x
The UNITE database for molecular identification of fungi – recent updates and future perspectives
resolves10.1007/s13225-014-0315-4
Epitypification and neotypification: guidelines with appropriate and inappropriate examples
resolves10.1016/B978-012373654-3.50010-9
Wine Waste Management: Treatment Methods and Potential Uses of Treated Waste
resolves10.7872/crym.v36.iss1.2015.3
<i>Polyporus umbellatus</i>, an Edible-Medicinal Cultivated Mushroom with Multiple Developed Health-Care Products as Food, Medicine and Cosmetics: A Review
resolves10.1371/journal.pone.0128183
Entorrhizomycota: A New Fungal Phylum Reveals New Perspectives on the Evolution of Fungi
resolves10.1111/2041-210X.12073
Improved software detection and extraction of ITS1 and
<scp>ITS</scp>
2 from ribosomal
<scp>ITS</scp>
sequences of fungi and other eukaryotes for analysis of environmental sequencing data
resolves10.3852/09-288
Amylocorticiales ord. nov. and Jaapiales ord. nov.: Early diverging clades of Agaricomycetidae dominated by corticioid forms
resolves10.1016/j.ympev.2004.12.019
Eccrinales (Trichomycetes) are not fungi, but a clade of protists at the early divergence of animals and fungi
resolves10.1007/S10267-003-0107-2
Diaporthe angelicae comb. nov., a modern description and placement of Diaporthopsis in Diaporthe
resolves10.1017/S0953756204221554
An Online Database of Names and Descriptions as an Alternative to Registration
resolves10.1111/bij.12553
Tales from the crypt: genome mining from fungarium specimens improves resolution of the mushroom tree of life
resolves10.1111/j.0014-3820.2003.tb01514.x
A MULTILOCUS GENEALOGICAL APPROACH TO PHYLOGENETIC SPECIES RECOGNITION IN THE MODEL EUKARYOTE NEUROSPORA
resolves10.1111/j.1365-294X.2012.05642.x
Multi‐locus species delimitation in closely related animals and fungi: one marker is not enough
resolves10.1007/s13225-015-0321-1
Dismantling Melaspileaceae: a first phylogenetic study of Buelliella, Hemigrapha, Karschia, Labrocarpon and Melaspilea
resolves10.1007/s13225-013-0250-9
Molecular data resolve a new order of Arthoniomycetes sister to the primarily lichenized Arthoniales and composed of black yeasts, lichenicolous and rock-inhabiting species
resolves10.1094/PDIS-92-10-1407
Canker and Twig Dieback of Blueberry Caused by <i>Pestalotiopsis</i> spp. and a <i>Truncatella</i> sp. in Chile
resolves10.2980/19-4-3513
Fruiting body and molecular rDNA sampling of fungi in woody debris from logged and unlogged boreal forests in northeastern Ontario
resolves10.1073/pnas.0907303106
Evidence that chytrids dominate fungal communities in high-elevation soils
resolves10.3897/mycokeys.1.2062
A new dawn for the naming of fungi: impacts of decisions made in Melbourne in July 2011 on the future publication and regulation of fungal names
resolves10.1073/pnas.94.22.12002
Evolution of gilled mushrooms and puffballs inferred from ribosomal DNA sequences
resolves10.1016/j.fbr.2011.01.001
Progress in molecular and morphological taxon discovery in Fungi and options for formal classification of environmental sequences
resolves10.1139/a2012-011
Climate change, fisheries, and aquaculture: trends and consequences for Canadian marine biodiversity<sup>1</sup>This manuscript is a companion paper to Vander Zwaag et al. (doi:10.1139/a2012-013) and Hutchings et al. (doi:10.1139/er-2012-0049) also appearing in this issue. These three papers comprise an edited version of a February 2012 Royal Society of Canada Expert Panel Report.
resolves10.5943/cream/3/1/1
Incorporating molecular data in fungal systematics: a guide for aspiring researchers
resolves10.1016/S1055-7903(02)00422-0
Phylogenetic relationships of Pestalotiopsis and allied genera inferred from ribosomal DNA sequences and morphological characters
resolves10.1006/fgbi.1998.1063
Relationships of the Insect-Pathogenic Order Entomophthorales (Zygomycota, Fungi) Based on Phylogenetic Analyses of Nuclear Small Subunit Ribosomal DNA Sequences (SSU rDNA)
resolves10.1016/S0924-2244(98)00051-X
Technology aspects related to microorganisms in functional foods
resolves10.5598/imafungus.2013.04.02.11
Research and teaching with the AFTOL SBD: an informatics resource for fungal subcellular and biochemical data
resolves10.1046/j.1365-2672.2002.01731.x
Antifungal activities of two<i>Lactobacillus plantarum</i>strains against<i>Fusarium</i>moulds<i>in vitro</i>and in malting of barley
resolves10.1016/j.fbr.2010.12.002
The importance of fungi for a more sustainable future on our planet
resolves10.5598/imafungus.2014.05.02.10
The importance of fungi and mycology for addressing major global challenges
resolves10.5598/imafungus.2012.03.01.09
The importance of fungi and of mycology for a global development of the bioeconomy
resolves10.1111/j.1095-8312.2012.01978.x
Miocene divergence, phenotypically cryptic lineages, and contrasting distribution patterns in common lichen-forming fungi (Ascomycota: Parmeliaceae)
resolves10.1016/j.ympev.2012.09.013
Multilocus phylogeny of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota): Insights on diversity, distributions, and a comparison of species tree and concatenated topologies
resolves10.1007/978-81-322-2235-4_2
The Dynamic Discipline of Species Delimitation: Progress Toward Effectively Recognizing Species Boundaries in Natural Populations
resolves10.1006/mpev.2000.0801
Phylogenetic Significance of the Pseudoparaphyses in Loculoascomycete Taxonomy
resolves10.1111/nph.12243
Fungal community analysis by high‐throughput sequencing of amplified markers – a user's guide
resolves10.1186/1471-2148-6-74
resolves10.3158/1557.1
Myconet Volume 14. Part One. Outline of Ascomycota—2009. Part Two. Notes on Ascomycete Systematics. Nos. 4751–5113
resolves10.3732/ajb.91.10.1446
Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits
resolves10.1007/s13225-012-0198-1
A multi-locus backbone tree for Pestalotiopsis, with a polyphasic characterization of 14 new species
resolves10.1590/S1982-56762013005000002
A destructive new disease of Syzygium samarangense in Thailand caused by the new species Pestalotiopsis samarangensis
resolves10.1007/s13225-015-0331-z
Towards a natural classification and backbone tree for Sordariomycetes
resolves10.1007/s13225-013-0256-3
Endophytic Colletotrichum from tropical grasses with a new species C. endophytica
resolves10.3732/ajb.89.4.688
Using RPB1 sequences to improve phylogenetic inference among mushrooms (<i>Inocybe</i>, Agaricales)
resolves10.1016/j.ympev.2006.08.024
Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi)
resolves10.1002/tax.601033
Synopsis of Proposals on Botanical Nomenclature – Melbourne 2011: A review of the proposals concerning the
<i>International Code of Botanical Nomenclature</i>
submitted to the XVIII International Botanical Congress
resolves10.1016/j.mycres.2007.12.001
Molecular evidence for long distance dispersal across the Southern Hemisphere in the Ganoderma applanatum-australe species complex (Basidiomycota)
resolves10.1093/sysbio/49.2.278
Phylogenetic Relationships of Agaric Fungi Based on Nuclear Large Subunit Ribosomal DNA Sequences
resolves10.1016/j.carbpol.2011.09.063
Current views on fungal chitin/chitosan, human chitinases, food preservation, glucans, pectins and inulin: A tribute to Henri Braconnot, precursor of the carbohydrate polymers science, on the chitin bicentennial
resolves10.1016/j.funeco.2015.06.006
FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
resolves10.1007/s13225-014-0291-8
Improving ITS sequence data for identification of plant pathogenic fungi
resolves10.1264/jsme2.ME14121
A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts
resolves10.1371/journal.pone.0052245
Using Phylogenetic and Coalescent Methods to Understand the Species Diversity in the Cladia aggregata Complex (Ascomycota, Lecanorales)
resolves10.1016/j.ympev.2007.10.002
Widespread occurrence and phylogenetic placement of a soil clone group adds a prominent new branch to the fungal tree of life
resolves10.1007/s00248-006-9117-x
A Phylogenetic Evaluation of Whether Endophytes Become Saprotrophs at Host Senescence
resolves10.1139/b94-204
Nuclear ribosomal internal transcribed spacer phylogeny and host diversity in the coelomycete <i>Phomopsis</i>
resolves10.1186/1471-2105-6-48
A Taxonomic Search Engine: Federating taxonomic databases using web services
resolves10.1371/journal.pone.0076737
Not as Ubiquitous as We Thought: Taxonomic Crypsis, Hidden Diversity and Cryptic Speciation in the Cosmopolitan Fungus Thelonectria discophora (Nectriaceae, Hypocreales, Ascomycota)
resolves10.3767/003158511X603719
Resolving the <i>Diaporthe</i> species occurring on soybean in Croatia
resolves10.1126/science.1086940
Seasonal Dynamics of Previously Unknown Fungal Lineages in Tundra Soils
resolves10.1128/AEM.57.2.553-556.1991
Use of Polymerase Chain Reaction To Detect the Take-All Fungus,
<i>Gaeumannomyces graminis</i>
, in Infected Wheat Plants
resolves10.1093/nar/gki199
Comparative mitochondrial genomics in zygomycetes: bacteria-like RNase P RNAs, mobile elements and a close source of the group I intron invasion in angiosperms
resolves10.1007/s13225-015-0340-y
Towards unraveling relationships in Xylariomycetidae (Sordariomycetes)
resolves10.1007/s13225-011-0113-1
From morphological to molecular: studies of myxomycetes since the publication of the Martin and Alexopoulos (1969) monograph
resolves10.1139/b95-332
Phylogenetic perspectives on basidiomycete systematics: evidence from the 18S rRNA gene
resolves10.1007/s13225-013-0242-9
Molecular phylogenetic analysis reveals six new species of Diaporthe from Australia
resolves10.1006/mpev.2000.0775
Molecular Phylogeny of Parasitic Zygomycota (Dimargaritales, Zoopagales) Based on Nuclear Small Subunit Ribosomal DNA Sequences
resolves10.1016/S1055-7903(03)00185-4
Molecular phylogeny of Zygomycota based on EF-1α and RPB1 sequences: limitations and utility of alternative markers to rDNA
resolves10.2323/jgam.51.267
Evolutionary relationships among basal fungi (Chytridiomycota and Zygomycota): Insights from molecular phylogenetics
resolves10.1186/s13742-015-0074-5
Standardizing metadata and taxonomic identification in metabarcoding studies
resolves10.1073/pnas.0906810106
Systems analysis of plant cell wall degradation by the model filamentous fungus Neurospora crassa
resolves10.1007/s13225-011-0126-9
The genus Phomopsis: biology, applications, species concepts and names of common phytopathogens
resolves10.7872/crym.v33.iss3.2012.295
Multi-locus Phylogeny Reveals Three new Species of Diaporthe from Thailand
resolves10.1007/s13225-014-0297-2
Insights into the genus Diaporthe: phylogenetic species delimitation in the D. eres species complex
resolves10.1590/S1517-83822009000100001
Principles and applications of polymerase chain reaction in medical diagnostic fields: a review
resolves10.1038/23932
Mycorrhizal fungal diversity determines plant biodiversity, ecosystem variability and productivity
resolves10.1016/j.mycres.2006.06.006
Evolutionary implications of a rRNA-based phylogeny of Harpellales
resolves10.1007/s13225-014-0309-2
Naming and outline of Dothideomycetes–2014 including proposals for the protection or suppression of generic names
resolves10.1128/AEM.00748-09
Assessment of Microbial Communities by Graph Partitioning in a Study of Soil Fungi in Two Alpine Meadows
The 43 references without a DOI — listed, not checked
no DOI — not checkedAvise JC, Ball RM Jr (1990) Principles of genealogical concordance in species concepts and biological taxonomy. In: Futuyma D, Antonovics J (eds) Oxford surveys in evolutionary biology, vol 7. Oxford University Press, Oxford, pp 45–67
no DOI — not checkedBarr ME (1987) Prodromus to class Loculoascomycetes. Newell, Amherst
no DOI — not checkedBartlett JMS, Stirling D (2003) A short history of the polymerase chain reaction. PCR protocols. Methods Mol Biol 226(2):3–6
no DOI — not checkedBenson DA, Clark K, Karsch-Mizrachi I, Lipman DJ, Ostell J, Sayers EW (2015) GenBank. Oxf J 43(D1):30–35
no DOI — not checkedBraun U, Cook RTA (2012) Taxonomic manual of the Erysiphales (powdery mildews), vol 11, CBS biodiversity series. CBS, Utrecht
no DOI — not checkedCracraft J, Donoghue MJ (eds) (2004) Assembling the tree of life. Oxford University Press, New York
no DOI — not checkedCrous PW, Gams W, Stalpers JA, Robert V, Stegehuis G (2004b) MycoBank: an online initiative to launch mycology into the 21st century. Stud Mycol 50:19–22
no DOI — not checkedCummins GB, Hiratsuka Y (2003) Illustrated genera of rust fungi, 3rd edn. Am Phytopathol Soc, St. Paul
no DOI — not checkedDiba K, Kordbacheh P, Mirhendi SH, Rezaie S, Mahmoudi M (2007) Identification of Aspergillus species using morphological characteristics. Pak J Med Sci 23:867–872
no DOI — not checkedGregory TR, Nicol JA, Tamm H, Kullman B, Kullman K, Leitch IJ, Murray BG, Kapraun DF, Greilhuber J, Bennett MD (2007) Eukaryotic genome size databases. Oxf J 35:332–338
no DOI — not checkedGupta VK, Sreenivasaprasad S, Mach RL (2015) Fungal bio-molecules: sources, applications and recent developments. Science p 424
no DOI — not checkedHawksworth DL (2015) Naming fungi involved in spoilage of food, drink, and water. Food Mycol 5:23–28
no DOI — not checkedHennebert GL (1987) Pleoanamorphy and its nomenclatural problem. In: Sugiyama J (ed) Pleomorphic fungi: the diversity and its taxonomic implications. Kodansha, Tokyo, pp 263–290
no DOI — not checkedHennebert GL, Weresub LK (1977) Terms for states and forms of fungi, their names and types. Mycotaxon 6:207–211
no DOI — not checkedJames TY, Porter D, Leander CA, Vilgalys R, Longcore JE (2000) Molecular phylogenetics of the Chytridiomycota supports the utility of ultrastructural data in chytrid systematics. Can J Bot 78:336–350
no DOI — not checkedJones G, Aydin Z, Oxelman B (2014) DISSECT: an assignment-free Bayesian discovery method for species delimitation under the multispecies coalescent. Oxf J 31(7):991–998
no DOI — not checkedJudd WS, Campbell CS, Kellogg, Stevens PF, Donoghue MJ (2002) Plant systematics: a phylogenetic approach, vol 2. Sinauer Associates, Sunderland, pp 1–39
no DOI — not checkedKendrick B (ed) (1979) The whole fungus: the sexual-asexual synthesis, vol 1–2. National Museums of Canada, Ottawa
no DOI — not checkedKendrick B (1985) The fifth kingdom. Mycologue Publications, Canada p vii + p 363
no DOI — not checkedKirk PM, Cannon PF, David JC, Stalpers JA (2001) Ainsworth & Bisby’s dictionary of the fungi, 9th edn. CAB International, Wallingford
no DOI — not checkedMaharachchikumbura SSN, Guo LD, Chukeatirote E, Hyde KD (2013a) Improving the backbone tree for the genus Pestalotiopsis; addition of P. steyaertii and P. magna sp. nov. Mycol Prog. doi: 10.1007/s11557-013-0944-0
no DOI — not checkedMcLaughlin DJ, Frieders EM, Haisheng L (1995) A microscopist’s view of heterobasidiomycete phylogeny. Stud Mycol 38:91–109
no DOI — not checkedMcLaughlin, David, Spatafora, Joseph W (2015) Systematics and evolution (Eds.) The Mycota, Springer-Verlag Berlin Heidelberg 7B:1–311
no DOI — not checkedMcNeill J, Barrie FR, Buck WR, Demoulin V, Greuter W, Hawksworth DL, Herendeen PS, Knapp S, Marhold K, Prado J, van Reine WF P’h, Smith GE, Wiersema JH, Turland NJ (eds) (2012) International Code of Nomenclature for algae, fungi, and plants (Melbourne Code) adopted by the Eighteenth International Botanical Congress Melbourne, Australia, July 2011. [Regnum Vegetabile No. 154.]. Koeltz Scientific Books, Königsten
no DOI — not checkedNilsson RH, Kristiansson E, Ryberg M, Hallenberg N, Larsson KH (2008) Intraspecific ITS variability in the kingdom fungi as expressed in the international sequence databases and its implications for molecular species identification. Evol Bioinformatics Online 4:193–201
no DOI — not checkedO’Donnell K (1979) Zygomycetes in culture, vol 2, Palfrey contributions in botany. Department of Botany, University of Georgia, Athens, p 257
no DOI — not checkedOberwinkler F (1987) Heterobasidiomycetes with ontogenetic yeast-stages—systematic and phylogenetic aspects. Stud Mycol 30:61–74
no DOI — not checkedPetrini LE, Petrini O (2013) Identifying moulds a practical guide. J. Cramer: VII (191):37
no DOI — not checkedPhotita W, Taylor PWJ, Ford R, Hyde KD, Lumyong S (2005) Morphological and molecular characterization of Colletotrichum species from herbaceous plants in Thailand. Fungal Divers 18:117–133
no DOI — not checkedPrillinger H, Dörfler C, Laaser G, Hauska G (1990) A contribution to the systematics and evolution of higher fungi: yeast-types in the basidiomycetes. Part III: Ustilago-type. Z Mycol 56:251–278
no DOI — not checkedPrillinger H, Laaser G, Dörfler C, Ziegler K (1991) A contribution to the systematics and evolution of higher fungi: yeast-types in the basidiomycetes. Part IV: Dacrymyces-type, Tremella-type. Sydowia 43:170–218
no DOI — not checkedPromputtha I, Jeewon R, Lumyong S, McKenzie EHC, Hyde KD (2005) Ribosomal DNA fingerprinting in the identification of non-sporulating endophytes from Magnolia liliifera (Magnoliaceae). Fungal Divers 20:167–186
no DOI — not checkedReynolds DR, Taylor JW (eds) (1993) The fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematics. CAB International, Oxon
no DOI — not checkedSantos JM, Phillips AJL (2009) Resolving the complex of Diaporthe (Phomopsis) species occurring on Foeniculum vulgare in Portugal. Fungal Divers 34:111–125
no DOI — not checkedSchoch CL, Robbertse B, Robert V, Vu D, Cardinali G, Irinyi L, Meyer W, Nilsson RH, Hughes K, Miller AN, Kirk PM, Abarenkov K, Aime MC, Ariyawansa HA, Bidartondo M, Boekhout T, Buyck B, Cai Q, Chen J, Crespo A, Crous PW, Damm U, De Beer ZW, Dentinger BT, Divakar PK, Dueñas M, Feau N, Fliegerova K, García MA, Ge ZW, Griffith GW, Groenewald JZ, Groenewald M, Grube M, Gryzenhout M, Gueidan C, Guo L, Hambleton S, Hamelin R, Hansen K, Hofstetter V, Hong SB, Houbraken J, Hyde KD, Inderbitzin P, Johnston PR, Karunarathna SC, Kõljalg U, Kovács GM, Kraichak E, Krizsan K, Kurtzman CP, Larsson KH, Leavitt S, Letcher PM, Liimatainen K, Liu JK, Lodge DJ, Luangsa-ard JJ, Lumbsch HT, Maharachchikumbura SS, Manamgoda D, Martín MP, Minnis AM, Moncalvo JM, Mulè G, Nakasone KK, Niskanen T, Olariaga I, Papp T, Petkovits T, Pino-Bodas R, Powell MJ, Raja HA, Redecker D, Sarmiento-Ramirez JM, Seifert KA, Shrestha B, Stenroos S, Stielow B, Suh SO, Tanaka K, Tedersoo L, Telleria MT, Udayanga D, Untereiner WA, Diéguez Uribeondo J, Subbarao KV, Vágvölgyi C, Visagie C, Voigt K, Walker DM, Weir BS, Weiß M, Wijayawardene NN, Wingfield MJ, Xu JP, Yang ZL, Zhang N, Zhuang WY, Federhen S (2014) Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi. Database. doi: 10.1093/database/bau061
no DOI — not checkedSeifert KA, Gams W, Crous PW, Samuels GJ (2000) Molecules, morphology and classification: towards monophyletic genera in the Ascomycetes. Stud Mycol 45:1–231
no DOI — not checkedSeifert K, Morgan-Jones G, Gams W, Kendrick B (2011) The genera of Hyphomycetes. CBS-KNAW Fungal Biodiversity Centre, Utrecht
no DOI — not checkedShenoy BD, Jeewon R, Hyde KD (2007) Impact of DNA sequence-data on the taxonomy of anamorphic fungi. Fungal Divers 26:1–54
no DOI — not checkedSmil V (2003) The earth’s biosphere: evolution, dynamics, and change. Massachusetts Institute of Technology, 1st edn. MIT press, p 181
no DOI — not checkedSugiyama J (ed) (1987) Pleomorphic fungi: the diversity and its taxonomic implications. Kodansha, Tokyo, pp 1–325
no DOI — not checkedWeresub LK, Hennebert GL (1979) Anamorph and teleomorph: terms for organs of reproduction rather than karyological phases. Mycotaxon 8:181–186
no DOI — not checkedWhite MM (2002) Taxonomic and molecular systematic studies of the Harpellales (Trichomycetes) toward understanding the diversity, evolution and dispersal of gut fungi [Doctoral dissertation]. University of Kansas Press, p 172
no DOI — not checkedWhite MM, Cafaro MJ, Gottlieb AM (2001) Taxonomy and systematics of Trichomycetes-past, present and future. In: Misra JK, Horn BW (eds) Trichomycetes and other fungal groups. Science Publishers, Enfield, pp 27–37
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