Reference health
The Genome of Caenorhabditis bovis
77/77 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
17 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 77 checked references that resolve
resolves10.1017/S003118200400647X
The use of<i>Caenorhabditis elegans</i>in parasitic nematode research
resolves10.1186/1471-2148-11-339
A phylogeny and molecular barcodes for Caenorhabditis, with numerous new species from rotting fruits
resolves10.1371/journal.pone.0094723
A Streamlined System for Species Diagnosis in Caenorhabditis (Nematoda: Rhabditidae) with Name Designations for 15 Distinct Biological Species
resolves10.1186/s12898-017-0150-z
Ephemeral-habitat colonization and neotropical species richness of Caenorhabditis nematodes
resolves10.1111/j.1439-0469.1996.tb00827.x
Phylogeny of Rhabditis subgenus Caenorhabditis (Rhabditidae, Nematoda)*
resolves10.1016/j.molbiopara.2016.11.005
WormBase ParaSite − a comprehensive resource for helminth genomics
resolves10.1101/gr.081851.108
Detecting heterozygosity in shotgun genome assemblies: Lessons from obligately outcrossing nematodes
resolves10.1371/journal.pbio.0050167
Comparison of C. elegans and C. briggsae Genome Sequences Reveals Extensive Conservation of Chromosome Organization and Synteny
resolves10.1126/science.282.5396.2012
Genome Sequence of the Nematode
<i>C. elegans</i>
: A Platform for Investigating Biology
resolves10.1126/science.aao0827
Rapid genome shrinkage in a self-fertile nematode reveals sperm competition proteins
resolves10.1371/journal.pbio.0000045
The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics
resolves10.1186/s40850-017-0013-2
Caenorhabditis monodelphis sp. n.: defining the stem morphology and genomics of the genus Caenorhabditis
resolves10.1038/s41467-018-05712-5
Biology and genome of a newly discovered sibling species of Caenorhabditis elegans
resolves10.1186/s12864-017-3860-x
Genome analysis of Diploscapter coronatus: insights into molecular peculiarities of a nematode with parthenogenetic reproduction
resolves10.1016/j.cub.2017.08.038
Genome Architecture and Evolution of a Unichromosomal Asexual Nematode
resolves10.1101/gr.8.5.449
Two Large Families of Chemoreceptor Genes in the Nematodes<i>Caenorhabditis elegans</i> and <i>Caenorhabditis briggsae</i> Reveal Extensive Gene Duplication, Diversification, Movement, and Intron Loss
resolves10.1371/journal.pgen.1000419
Recombinational Landscape and Population Genomics of Caenorhabditis elegans
resolves10.1073/pnas.0403094101
<i>Caenorhabditis</i>
phylogeny predicts convergence of hermaphroditism and extensive intron loss
resolves10.1186/gb-2004-5-3-r15
The ABC transporter gene family of Caenorhabditis elegans has implications for the evolutionary dynamics of multidrug resistance in eukaryotes
resolves10.1016/S0166-6851(97)00215-6
Ivermectin resistance in nematodes may be caused by alteration of P-glycoprotein homolog1Note: Nucleotide sequence data reported in this paper have been submitted to the GenBank data base with the accession number AF 003908.1
resolves10.1016/j.molbiopara.2007.11.017
P-glycoprotein-like protein, a possible genetic marker for ivermectin resistance selection in Onchocerca volvulus
resolves10.1017/S0031182009990345
P-glycoprotein interfering agents potentiate ivermectin susceptibility in ivermectin sensitive and resistant isolates of<i>Teladorsagia circumcincta</i>and<i>Haemonchus contortus</i>
resolves10.1016/j.exppara.2013.03.005
Caenorhabditis elegans: Modest increase of susceptibility to ivermectin in individual P-glycoprotein loss-of-function strains
resolves10.1371/journal.pone.0061635
Genetic Variants and Increased Expression of Parascaris equorum P-glycoprotein-11 in Populations with Decreased Ivermectin Susceptibility
resolves10.1016/S1471-4922(01)02036-0
River blindness: a role for parasite retinoid-binding proteins in the generation of pathology?
resolves10.1074/jbc.M002715200
A Broad Spectrum Kunitz Type Serine Protease Inhibitor Secreted by the Hookworm Ancylostoma ceylanicum
resolves10.1016/j.vetimm.2007.11.002
Characterization of a galectin-like activity from the parasitic nematode, Haemonchus contortus, which modulates ovine eosinophil migration in vitro
resolves10.1016/j.molbiopara.2010.06.014
Inhibition of dextran sulfate sodium (DSS)-induced intestinal inflammation via enhanced IL-10 and TGF-β production by galectin-9 homologues isolated from intestinal parasites
resolves10.1186/1756-3305-7-342
Galectin Hco-gal-m from Haemonchus contortus modulates goat monocytes and T cell function in different patterns
resolves10.1534/genetics.106.061879
High Nucleotide Polymorphism and Rapid Decay of Linkage Disequilibrium in Wild Populations of <i>Caenorhabditis remanei</i>
resolves10.1073/pnas.1303057110
Molecular hyperdiversity defines populations of the nematode
<i>Caenorhabditis brenneri</i>
resolves10.1186/1741-7007-10-59
Population dynamics and habitat sharing of natural populations of Caenorhabditis elegans and C. briggsae
resolves10.2307/3222192
Two New Species of Rhabditis (Rhabditis macrocerca and R. clavopapillata) Associated with Dogs and Monkeys in Experimental Strongyloides Studies
resolves10.1007/BF01928853
Ein Fall von mikroskopisch kleinen Rundwürmern —Rhabditis genitalis — im Urin einer Kranken
resolves10.1590/S0100-736X2009001100008
Inefficacy of albendazole sulphoxide and ivermectin for the treatment of bovine parasitic otitis caused by rhabditiform nematodes
resolves10.1016/j.vetpar.2019.108924
Combined use of ivermectin, dimethyl sulfoxide, mineral oil and nematophagous fungi to control Rhabditis spp.
resolves10.1139/o83-064
Alterations in the pattern of gene expression following heat shock in the nematode <i>Caenorhabditis elegans</i>
resolves10.1002/(SICI)1097-010X(19990701)284:2<147::AID-JEZ4>3.0.CO;2-Z
Feeding is inhibited by sublethal concentrations of toxicants and by heat stress in the nematodeCaenorhabditis elegans: Relationship to the cellular stress response
resolves10.1146/annurev.micro.51.1.47
<i>XENORHABDUS</i> AND <i>PHOTORHABDUS</i> SPP.: Bugs That Kill Bugs
resolves10.1128/AEM.68.8.3943-3947.2002
Endotoxin Activity of
<i>Moraxella osloensis</i>
against the Grey Garden Slug,
<i>Deroceras reticulatum</i>
resolves10.1371/journal.pone.0112963
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
resolves10.1093/bioinformatics/btv661
BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS
resolves10.1093/bioinformatics/btv351
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
resolves10.1093/bioinformatics/btr011
A fast, lock-free approach for efficient parallel counting of occurrences of
<i>k</i>
-mers
resolves10.1093/bioinformatics/btx153
GenomeScope: fast reference-free genome profiling from short reads
resolves10.1186/s13059-015-0721-2
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
resolves10.1093/molbev/msu300
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
resolves10.1093/molbev/mst010
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
resolves10.4137/EBO.S12813
PhyloTreePruner: A Phylogenetic Tree-Based Approach for selection of Orthologous sequences for phylogenomics
resolves10.1534/g3.117.300233
KinFin: Software for Taxon-Aware Analysis of Clustered Protein Sequences
resolves10.1186/1471-2105-9-18
LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons
resolves10.1093/nar/gkv1248
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
resolves10.1093/bioinformatics/btp348
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
resolves10.1093/nar/gkw290
Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
resolves10.1093/nar/gkp759
Fine-grained annotation and classification of de novo predicted LTR retrotransposons
The 17 references without a DOI — listed, not checked
no DOI — not checkedEin neuer Nematode aus dem äusseren Gehörgang von Zeburindern in Ostafrika, Rhabditis bovis n. sp.(Rhabditidoidea; Rhabditidae)
no DOI — not checkedEcology of Caenorhabditis species
no DOI — not checkedOtitis bovina por Rhabditis bovis en Córdoba, Colombia. Reporte de dos casos
no DOI — not checkedThe role of flies, manure and soil in the epidemiology of bovine parasitic otitis
no DOI — not checkedNematodes associated with earthworms and carrion beetles
no DOI — not checked10.1016/j.cub.2020.01.074_bib44
no DOI — not checkedCaenorhabditis avicola sp. n.(Rhabditidae) found in a bird from Taiwan
no DOI — not checkedAligning sequence reads, clone sequences and assembly contigs with BWA-MEM
no DOI — not checked10.1016/j.cub.2020.01.074_bib65
no DOI — not checked10.1016/j.cub.2020.01.074_bib66
no DOI — not checkedHaplotype-based variant detection from short-read sequencing
no DOI — not checked10.1016/j.cub.2020.01.074_bib73
no DOI — not checked10.1016/j.cub.2020.01.074_bib80
no DOI — not checkedGenomic classification of protein-coding gene families
no DOI — not checkedCreation of a comprehensive repeat library for a newly sequenced parasitic worm genome
no DOI — not checked10.1016/j.cub.2020.01.074_bib94
no DOI — not checked10.1016/j.cub.2020.01.074_bib95
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