Reference health
Genome assembly, sex-biased gene expression and dosage compensation in the damselfly Ischnura elegans
113/113 checkable references clean · checked 2026-07-23
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
9 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 113 checked references that resolve
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SOME INCONVENIENT TRUTHS ABOUT SEX CHROMOSOME DOSAGE COMPENSATION AND THE POTENTIAL ROLE OF SEXUAL CONFLICT
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Mechanisms and Evolutionary Patterns of Mammalian and Avian Dosage Compensation
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Evolution of Sex Chromosome Dosage Compensation in Animals: A Beautiful Theory, Undermined by Facts and Bedeviled by Details
resolves10.1038/207785a0
Synthesis of Ribonucleic Acid by the X-Chromosomes of Drosophila melanogaster and the Problem of Dosage Compensation
resolves10.1038/nrg3124
Dosage compensation in Drosophila melanogaster: epigenetic fine-tuning of chromosome-wide transcription
resolves10.1007/BF01570786
Mammalian X chromosome inactivation: Testing the hypothesis of transcriptional control
resolves10.1038/hdy.2008.116
All dosage compensation is local: Gene-by-gene regulation of sex-biased expression on the chicken Z chromosome
resolves10.1038/349038a0
A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome
resolves10.1038/nrg3687
X chromosome regulation: diverse patterns in development, tissues and disease
resolves10.1038/nature03479
X-inactivation profile reveals extensive variability in X-linked gene expression in females
resolves10.1093/gbe/evv215
The X Chromosome of Hemipteran Insects: Conservation, Dosage Compensation and Sex-Biased Expression
resolves10.1093/gbe/evq024
Hyperexpression of the X Chromosome in Both Sexes Results in Extensive Female Bias of X-Linked Genes in the Flour Beetle
resolves10.1093/gbe/evr036
Getting a Full Dose? Reconsidering Sex Chromosome Dosage Compensation in the Silkworm, Bombyx mori
resolves10.1093/gbe/evv156
Sex Chromosome Dosage Compensation in
<i>Heliconius</i>
Butterflies: Global yet Still Incomplete?
resolves10.1093/molbev/mss010
Sex Chromosomes Evolved from Independent Ancestral Linkage Groups in Winged Insects
resolves10.1186/s12983-016-0176-7
Odonata (dragonflies and damselflies) as a bridge between ecology and evolutionary genomics
resolves10.1111/j.1095-8312.1997.tb01492.x
Conflict resolution in the Odonata: implications for understanding female mating patterns and female choice
resolves10.1006/anbe.2001.1948
Evolution of female colour polymorphism in damselflies: testing the hypotheses
resolves10.1111/j.1420-9101.2008.01567.x
Sexual selection, sexual size dimorphism and Rensch’s rule in Odonata
resolves10.1086/680982
Evolutionary Time-Series Analysis Reveals the Signature of Frequency-Dependent Selection on a Female Mating Polymorphism
resolves10.1111/evo.13221
Male‐mimicking females increase male‐male interactions, and decrease male survival and condition in a female‐polymorphic damselfly
resolves10.1111/j.1420-9101.2010.02222.x
A comparative analysis of senescence in adult damselflies and dragonflies (Odonata)
resolves10.1111/evo.13302
Body size evolution in an old insect order: No evidence for Cope's Rule in spite of fitness benefits of large size
resolves10.1111/mec.14709
Signatures of local adaptation along environmental gradients in a range‐expanding damselfly (<i>Ischnura elegans</i>)
resolves10.1007/BF01787346
Sex chromosomes and sex determining mechanisms in Odonata, with a review of the cytological conditions in the familyGomphidae, and references to the karyotypic evolution in the order
resolves10.1111/j.1095-8312.2005.00506.x
Hybridization and the inheritance of female colour polymorphism in two ischnurid damselflies (Odonata: Coenagrionidae)
resolves10.1111/mec.13548
Gene expression under thermal stress varies across a geographical range expansion front
resolves10.1073/pnas.1017351108
High-quality draft assemblies of mammalian genomes from massively parallel sequence data
resolves10.1016/j.actatropica.2016.03.026
Wolbachia infections in mosquitoes and their predators inhabiting rice field communities in Thailand and China
resolves10.1016/j.cell.2013.05.040
Horizontal Gene Transfer from Diverse Bacteria to an Insect Genome Enables a Tripartite Nested Mealybug Symbiosis
resolves10.1093/molbev/msu004
Parallel Histories of Horizontal Gene Transfer Facilitated Extreme Reduction of Endosymbiont Genomes in Sap-Feeding Insects
resolves10.1093/gbe/evv170
Metabolic Coevolution in the Bacterial Symbiosis of Whiteflies and Related Plant Sap-Feeding Insects
resolves10.3390/genes8100247
Et tu, Brute? Not Even Intracellular Mutualistic Symbionts Escape Horizontal Gene Transfer
resolves10.1093/bioinformatics/btu531
AliView: a fast and lightweight alignment viewer and editor for large datasets
resolves10.1093/molbev/msy111
Evolution of Sex-Biased Gene Expression and Dosage Compensation in the Eye and Brain of Heliconius Butterflies
resolves10.1186/s13072-017-0137-1
Dosage compensation and sex-specific epigenetic landscape of the X chromosome in the pea aphid
resolves10.1126/science.282.5388.487
Phosphorylation and Activation of 13
<i>S</i>
Condensin by Cdc2 in Vitro
resolves10.1126/science.1244508
A Cascade of Histone Modifications Induces Chromatin Condensation in Mitosis
resolves10.1128/MCB.06546-11
<i>Caenorhabditis elegans</i>
Dosage Compensation Regulates Histone H4 Chromatin State on X Chromosomes
resolves10.1101/gad.566910
The death-associated protein DAXX is a novel histone chaperone involved in the replication-independent deposition of H3.3
resolves10.1128/MCB.00597-16
The
<i>Drosophila</i>
DAXX-Like Protein (DLP) Cooperates with ASF1 for H3.3 Deposition and Heterochromatin Formation
resolves10.1371/journal.pone.0066585
Identification of Novel Gene Targets and Functions of p21-Activated Kinase 1 during DNA Damage by Gene Expression Profiling
resolves10.1093/molbev/msx190
Global Dosage Compensation Is Ubiquitous in Lepidoptera, but Counteracted by the Masculinization of the Z Chromosome
resolves10.1093/gbe/evy108
The Effect of Hybridization on Dosage Compensation in Member Species of the Anopheles gambiae Species Complex
resolves10.1007/978-4-431-56609-0_13
Sex Determination Cascade in Insects: A Great Treasure House of Alternative Splicing
resolves10.1093/molbev/msj070
Functional Conservation of the fruitless Male Sex-Determination Gene Across 250 Myr of Insect Evolution
resolves10.1038/nature07052
Evidence for the evolutionary nascence of a novel sex determination pathway in honeybees
resolves10.1186/1471-2164-11-399
Alternative splicing is frequent during early embryonic development in mouse
resolves10.1371/journal.pgen.1007838
Evolution of maternal and zygotic mRNA complements in the early Drosophila embryo
resolves10.1007/s00427-015-0491-6
The comparative study of five sex-determining proteins across insects unveils high rates of evolution at basal components of the sex determination cascade
resolves10.1126/sciadv.aau3753
Genetic architecture and sex-specific selection govern modular, male-biased evolution of
<i>doublesex</i>
resolves10.1002/j.1460-2075.1995.tb07105.x
Three protein binding sites form an enhancer that regulates sex‐ and fat body‐specific transcription of Drosophila yolk protein genes.
resolves10.1016/0300-9629(96)00055-2
Relationship between vitellogenin and its related egg yolk proteins in Sakhalin taimen (Hucho perryi)
resolves10.1016/B978-0-12-800222-3.00003-6
An Epigenetic Switch of the Brain Sex as a Basis of Gendered Behavior in Drosophila
resolves10.1038/s41467-017-00087-5
Genetic and neuronal mechanisms governing the sex-specific interaction between sleep and sexual behaviors in Drosophila
resolves10.1186/s12859-015-0663-4
Sealer: a scalable gap-closing application for finishing draft genomes
resolves10.1186/1471-2164-15-808
De novo transcriptome of Ischnura elegans provides insights into sensory biology, colour and vision genes
resolves10.1186/s12864-016-3334-6
Transcriptome profiling in the damselfly Ischnura elegans identifies genes with sex-biased expression
resolves10.1073/pnas.1921046117
RepeatModeler2 for automated genomic discovery of transposable element families
resolves10.1186/1471-2105-12-491
MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects
resolves10.1093/nar/gku1220
OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software
resolves10.1093/bioinformatics/btm071
CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes
resolves10.1093/bioinformatics/bti610
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
resolves10.1093/bioinformatics/btu851
PANNZER: high-throughput functional annotation of uncharacterized proteins in an error-prone environment
resolves10.1093/bioinformatics/btv351
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
resolves10.1093/bioinformatics/btp324
Fast and accurate short read alignment with Burrows–Wheeler transform
resolves10.1101/gr.176552.114
An efficient and scalable analysis framework for variant extraction and refinement from population-scale DNA sequence data
resolves10.1093/bioinformatics/btq033
BEDTools: a flexible suite of utilities for comparing genomic features
resolves10.1186/s13059-015-0721-2
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
resolves10.1186/1471-2105-12-323
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
resolves10.1186/s13059-014-0550-8
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
The 9 references without a DOI — listed, not checked
no DOI — not checked10.1016/j.ygeno.2021.04.003_bb0005
no DOI — not checked10.1016/j.ygeno.2021.04.003_bb0015
no DOI — not checkedSex chromosome evolution: historical insights and future perspectives
no DOI — not checked10.1016/j.ygeno.2021.04.003_bb0200
no DOI — not checked10.1016/j.ygeno.2021.04.003_bb0210
no DOI — not checkedGenomic features of the damselfly Calopteryx splendens representing a sister clade to Most insect orders
no DOI — not checkedCondensin-mediated chromosome organization and gene regulation
no DOI — not checkedThe genomic location of sexually antagonistic variation: some cautionary comments
no DOI — not checked10.1016/j.ygeno.2021.04.003_bb0505
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