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Methods for studying RNA localization in bacteria

https://doi.org/10.1016/j.ymeth.2015.12.010
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28/28 checkable references clean · checked 2026-07-22

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

The 28 checked references that resolve
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Translation-Independent Localization of mRNA in <i>E. coli</i>
resolves10.1021/ja026649g
Imaging of RNA in Bacteria with Self-Ligating Quenched Probes
resolves10.1126/science.280.5363.585
Visualization of Single RNA Transcripts in Situ
resolves10.1038/nmeth.1253
Imaging individual mRNA molecules using multiple singly labeled probes
resolves10.1021/ac303792p
Counting Small RNA in Pathogenic Bacteria
resolves10.1038/nprot.2013.066
Measuring mRNA copy number in individual Escherichia coli cells using single-molecule fluorescent in situ hybridization
resolves10.1073/pnas.0904904106
Subcellular localization of a bacterial regulatory RNA
resolves10.1038/nature09152
Spatial organization of the flow of genetic information in bacteria
resolves10.1038/msb.2012.42
Gene location and DNA density determine transcription factor distributions in Escherichia coli
resolves10.1016/S1097-2765(00)80143-4
Localization of ASH1 mRNA Particles in Living Yeast
resolves10.1073/pnas.0404443101
RNA dynamics in live <i>Escherichia coli</i> cells
resolves10.1128/JB.05879-11
DivIVA-Mediated Polar Localization of ComN, a Posttranscriptional Regulator of Bacillus subtilis
resolves10.1126/science.aaa3380
An RNA biosensor for imaging the first round of translation from single cells to living animals
resolves10.1007/978-1-61779-005-8_14
In Vivo Visualization of RNA Using the U1A-Based Tagged RNA System
resolves10.1038/nmeth1065
λN-GFP: an RNA reporter system for live-cell imaging
resolves10.1111/j.1365-313X.2012.04923.x
<i>In vivo</i> visualization of RNA in plants cells using the λN <sub>22</sub> system and a GATEWAY‐compatible vector series for candidate RNAs
resolves10.1038/nmeth1023
RNA visualization in live bacterial cells using fluorescent protein complementation
resolves10.1007/978-1-4939-2730-2_7
A Universal Method for Labeling Native RNA in Live Bacterial Cells
resolves10.1002/anie.201306622
Contact‐Mediated Quenching for RNA Imaging in Bacteria with a Fluorophore‐Binding Aptamer
resolves10.1126/science.1207339
RNA Mimics of Green Fluorescent Protein
resolves10.1038/nmeth.2701
A superfolding Spinach2 reveals the dynamic nature of trinucleotide repeat–containing RNA
resolves10.1038/srep17295
Tandem Spinach Array for mRNA Imaging in Living Bacterial Cells
resolves10.1021/cb500499x
RNA Mango Aptamer-Fluorophore: A Bright, High-Affinity Complex for RNA Labeling and Tracking
resolves10.1021/ja508478x
Broccoli: Rapid Selection of an RNA Mimic of Green Fluorescent Protein by Fluorescence-Based Selection and Directed Evolution
resolves10.1146/annurev-biophys-060414-033954
Structure and Mechanism of RNA Mimics of Green Fluorescent Protein
resolves10.1073/pnas.080077197
Association of <i>Escherichia coli</i> ribosomes with the inner membrane requires the signal recognition particle receptor but is independent of the signal recognition particle
resolves10.1111/cmi.12024
Superresolution microscopy for microbiology
resolves10.1126/science.1258849
Determination of in vivo target search kinetics of regulatory noncoding RNA
What this badge says. CiteStamped means the CHECKABLE references of this work were clean at the dated check: each resolved to a known work in a public registry, and none carried a retraction notice at that time. It says nothing about the quality, findings, or importance of the work itself, and nothing about references deposited without a DOI.

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