Reference health

TopoStats – A program for automated tracing of biomolecules from AFM images

https://doi.org/10.1016/j.ymeth.2021.01.008
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26/26 checkable references clean · checked 2026-07-22

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

4 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

The 26 checked references that resolve
resolves10.1038/s41565-018-0149-4
High-speed photothermal off-resonance atomic force microscopy reveals assembly routes of centriolar scaffold protein SAS-6
resolves10.1126/science.1205510
High-Speed Atomic Force Microscopy Reveals Rotary Catalysis of Rotorless F <sub>1</sub> -ATPase
resolves10.1002/smll.201400265
Single‐Molecule Reconstruction of Oligonucleotide Secondary Structure by Atomic Force Microscopy
resolves10.1038/s41467-018-04587-w
Dynamic structural states of ClpB involved in its disaggregation function
resolves10.1038/nature09450
Video imaging of walking myosin V by high-speed atomic force microscopy
resolves10.1016/j.jsb.2009.04.011
Dynamics of bacteriorhodopsin 2D crystal observed by high-speed atomic force microscopy
resolves10.1038/s41467-021-21243-y
Base-pair resolution analysis of the effect of supercoiling on DNA flexibility and major groove recognition by triplex-forming oligonucleotides
resolves10.1126/science.1251652
The Resolution Revolution
resolves10.7554/eLife.42166
New tools for automated high-resolution cryo-EM structure determination in RELION-3
resolves10.1038/nmeth.2019
Fiji: an open-source platform for biological-image analysis
resolves10.1166/jamr.2013.1164
DNA Trace: A Comprehensive Software for Polymer Image Processing
resolves10.1109/MCSE.2011.37
The NumPy Array: A Structure for Efficient Numerical Computation
resolves10.1038/s41592-019-0686-2
SciPy 1.0: fundamental algorithms for scientific computing in Python
resolves10.1145/357994.358023
A fast parallel algorithm for thinning digital patterns
resolves10.1109/MCSE.2007.55
Matplotlib: A 2D Graphics Environment
resolves10.1007/978-1-4939-3631-1_5
Imaging DNA Structure by Atomic Force Microscopy
resolves10.1038/s41467-019-10058-7
Single-molecule kinetics of pore assembly by the membrane attack complex
resolves10.1021/acsnano.7b08044
A Programmable DNA Origami Platform for Organizing Intrinsically Disordered Nucleoporins within Nanopore Confinement
resolves10.1021/acsnano.9b02424
Quantification of Biomolecular Dynamics Inside Real and Synthetic Nuclear Pore Complexes Using Time-Resolved Atomic Force Microscopy
resolves10.26508/lsa.201800142
Atomic force microscopy reveals structural variability amongst nuclear pore complexes
resolves10.1063/1.2766825
Tip-sample distance control using photothermal actuation of a small cantilever for high-speed atomic force microscopy
resolves10.1038/s41467-018-07653-5
CryoEM reveals how the complement membrane attack complex ruptures lipid bilayers
resolves10.1039/C6CC07110D
Studies of G-quadruplexes formed within self-assembled DNA mini-circles
resolves10.1038/s41565-018-0109-z
A bio-hybrid DNA rotor–stator nanoengine that moves along predefined tracks
resolves10.1128/JCM.01231-18
Validation and Implementation of a Diagnostic Algorithm for DNA Detection of Bordetella pertussis, B. parapertussis, and B. holmesii in a Pediatric Referral Hospital in Barcelona, Spain
resolves10.1016/S0092-8674(00)81931-5
Topological Selectivity in Xer Site-Specific Recombination
The 4 references without a DOI — listed, not checked
no DOI — not checkedGwyddion: an open-source software for SPM data analysis
no DOI — not checkedHigh-throughput AFM analysis reveals unwrapping pathways of H3 and CENP-A nucleosomes
no DOI — not checkedExploring writhe in supercoiled minicircle DNA
no DOI — not checkedStructural diversity of supercoiled DNA
What this badge says. CiteStamped means the CHECKABLE references of this work were clean at the dated check: each resolved to a known work in a public registry, and none carried a retraction notice at that time. It says nothing about the quality, findings, or importance of the work itself, and nothing about references deposited without a DOI.

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