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H Atom Positions and Nuclear Magnetic Resonance Chemical Shifts of Short H Bonds in Photoactive Yellow Protein
33/33 checkable references clean · checked 2026-08-29
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
6 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 33 checked references that resolve
resolves10.1128/jb.175.10.3096-3104.1993
The eubacterium Ectothiorhodospira halophila is negatively phototactic, with a wavelength dependence that fits the absorption spectrum of the photoactive yellow protein
resolves10.1021/bi00252a001
Complete Chemical Structure of Photoactive Yellow Protein: Novel Thioester-Linked 4-Hydroxycinnamyl Chromophore and Photocycle Chemistry
resolves10.1021/bi00039a024
Resonance Raman evidence that the thioester-linked 4-hydroxycinnamyl chromophore of photoactive yellow protein is deprotonated
resolves10.1021/bi9623035
Glu46 Donates a Proton to the 4-Hydroxycinnamate Anion Chromophore During the Photocycle of Photoactive Yellow Protein
resolves10.1021/bi991513p
Protonation States and pH Titration in the Photocycle of Photoactive Yellow Protein
resolves10.1021/bi00019a004
1.4 .ANG. Structure of Photoactive Yellow Protein, a Cytosolic Photoreceptor: Unusual Fold, Active Site, and Chromophore
resolves10.1038/nsb958
Anticipatory active-site motions and chromophore distortion prime photoreceptor PYP for light activation
resolves10.1073/pnas.0900168106
Hydrogen bond dynamics in the active site of photoactive yellow protein
resolves10.1126/science.7661899
A Low-Barrier Hydrogen Bond in the Catalytic Triad of Serine Proteases
resolves10.1002/prot.20096
The low barrier hydrogen bond (LBHB) proposal revisited: The case of the Asp ··· His pair in serine proteases
resolves10.1021/bi000357f
Water Structural Changes Involved in the Activation Process of Photoactive Yellow Protein
resolves10.1021/ja00980a002
Acid-Base Titrations in Concentrated Guanidine Hydrochloride. Dissociation Constants of the Guanidinium Ion and of Some Amino Acids
resolves10.1074/jbc.271.50.31949
Spectral Tuning, Fluorescence, and Photoactivity in Hybrids of Photoactive Yellow Protein, Reconstituted with Native or Modified Chromophores
resolves10.1016/0022-2836(76)90311-9
Theoretical studies of enzymic reactions: Dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme
resolves10.1063/1.1924598
Nuclear-magnetic-resonance shielding constants calculated by pseudospectral methods
resolves10.1107/S0108768110003423
Predicted crystal structures of tetramethylsilane and tetramethylgermane and an experimental low-temperature structure of tetramethylsilane
resolves10.1021/jp8071712
Progress in <i>Ab Initio</i> QM/MM Free-Energy Simulations of Electrostatic Energies in Proteins: Accelerated QM/MM Studies of p<i>K</i><sub>a</sub>, Redox Reactions and Solvation Free Energies
resolves10.1560/IJC.49.2.199
OHO Hydrogen Bond Geometries and NMR Chemical Shifts: From Equilibrium Structures to Geometric H/D Isotope Effects, with Applications for Water, Protonated Water, and Compressed Ice
resolves10.1021/jp981604g
Lengthening of the Covalent X−H Bond in Heteronuclear Hydrogen Bonds Quantified from Organic and Organometallic Neutron Crystal Structures
resolves10.1021/ja201113a
Reaction Pathways of Proton Transfer in Hydrogen-Bonded Phenol–Carboxylate Complexes Explored by Combined UV–Vis and NMR Spectroscopy
resolves10.1021/bi051515b
Low-Barrier Hydrogen Bond Hypothesis in the Catalytic Triad Residue of Serine Proteases: Correlation between Structural Rearrangement and Chemical Shifts in the Acylation Process
resolves10.1073/pnas.93.24.13665
Energy considerations show that low-barrier hydrogen bonds do not offer a catalytic advantage over ordinary hydrogen bonds
resolves10.1073/pnas.0409035102
Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds
resolves10.1073/pnas.0603476103
Ultrafast infrared spectroscopy reveals a key step for successful entry into the photocycle for photoactive yellow protein
resolves10.1038/nature09913
Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å
resolves10.1021/bi201366j
Short Hydrogen Bond between Redox-Active Tyrosine Y
<sub>Z</sub>
and D1-His190 in the Photosystem II Crystal Structure
The 6 references without a DOI — listed, not checked
no DOI — not checkedAn Introduction to Hydrogen Bonding
no DOI — not checkedFrey, P. A. (2006) inIsotope Effects in Chemistry and Biology(Kohen, A. and Limbach, H.H., Eds.) pp975–993,CRC Press,Boca Raton, FL.
no DOI — not checkedref20/cit20
no DOI — not checkedQSite
no DOI — not checkedJaguar
no DOI — not checkedref28/cit28
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