Reference health
Genomic and enzymatic evidence for acetogenesis among multiple lineages of the archaeal phylum Bathyarchaeota widespread in marine sediments
54/54 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
1 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 54 checked references that resolve
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Global distribution of microbial abundance and biomass in subseafloor sediment
resolves10.1073/pnas.0600035103
Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru
resolves10.1126/science.1249213
Global rates of marine sulfate reduction and implications for sub–sea-floor metabolic activities
resolves10.1038/ismej.2008.43
Numbers, biomass and cultivable diversity of microbial populations relate to depth and borehole-specific conditions in groundwater from depths of 4–450 m in Olkiluoto, Finland
resolves10.1080/01490450903456681
Acetogenesis in Deep Subseafloor Sediments of The Juan de Fuca Ridge Flank: A Synthesis of Geochemical, Thermodynamic, and Gene-based Evidence
resolves10.1038/nature07174
Significant contribution of Archaea to extant biomass in marine subsurface sediments
resolves10.1038/ismej.2012.37
Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments
resolves10.1111/j.1574-6941.2008.00566.x
Prokaryotic biodiversity and activity in the deep subseafloor biosphere
resolves10.1128/AEM.02090-13
Meta-Analysis of Quantification Methods Shows that Archaea and Bacteria Have Similar Abundances in the Subseafloor
resolves10.1038/ismej.2013.174
Genetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses
resolves10.1111/1462-2920.13142
Genomic evidence for distinct carbon substrate preferences and ecological niches of
<scp>B</scp>
athyarchaeota in estuarine sediments
resolves10.1126/science.aac7745
Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics
resolves10.1111/1574-6968.12312
Acetate formation in the photoheterotrophic bacterium<i>Chloroflexus aurantiacus</i>involves an archaeal type ADP-forming acetyl-CoA synthetase isoenzyme I
resolves10.1186/1471-2164-13-562
The genome sequence of Propionibacterium acidipropionici provides insights into its biotechnological and industrial potential
resolves10.1073/pnas.0407486101
Anaerobic growth of
<i>Methanosarcina acetivorans</i>
C2A on carbon monoxide: An unusual way of life for a methanogenic archaeon
resolves10.1128/JB.01382-07
Evolution of Acetoclastic Methanogenesis in
<i>Methanosarcina</i>
via Horizontal Gene Transfer from Cellulolytic
<i>Clostridia</i>
resolves10.1023/A:1020514617738
Ecological consequences of the phylogenetic and physiological diversities of acetogens
resolves10.1111/j.1462-2920.2007.01306.x
<i>Archaeoglobus fulgidus</i>
couples CO oxidation to sulfate reduction and acetogenesis with transient formate accumulation
resolves10.1128/JB.186.22.7754-7762.2004
Identification and Functional Verification of Archaeal-Type Phosphoenolpyruvate Carboxylase, a Missing Link in Archaeal Central Carbohydrate Metabolism
resolves10.1128/JB.01839-14
Evidence for a Hexaheteromeric Methylenetetrahydrofolate Reductase in Moorella thermoacetica
resolves10.1038/nature04584
Evidence from fluid inclusions for microbial methanogenesis in the early Archaean era
resolves10.1016/j.gca.2009.03.001
The stable carbon isotope biogeochemistry of acetate and other dissolved carbon species in deep subseafloor sediments at the northern Cascadia Margin
resolves10.1073/pnas.0709942105
Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment
resolves10.1111/1462-2920.12716
The archaeal lipidome in estuarine sediment dominated by members of the
<scp>M</scp>
iscellaneous
<scp>C</scp>
renarchaeotal
<scp>G</scp>
roup
resolves10.1128/aem.63.9.3367-3373.1997
Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA
resolves10.1073/pnas.1207574109
Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge
resolves10.1111/1462-2920.12025
Bacterial and archaeal diversities in
<scp>Y</scp>
unnan and
<scp>T</scp>
ibetan hot springs,
<scp>C</scp>
hina
resolves10.1128/AEM.01541-09
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
resolves10.1093/nar/gkm864
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
resolves10.1093/bioinformatics/bts174
IDBA-UD: a <i>de novo</i> assembler for single-cell and metagenomic sequencing data with highly uneven depth
resolves10.1093/bioinformatics/btp324
Fast and accurate short read alignment with Burrows–Wheeler transform
resolves10.1126/science.1224041
Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla
resolves10.1101/gr.186072.114
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
resolves10.1093/nar/gkl723
MetaGene: prokaryotic gene finding from environmental genome shotgun sequences
resolves10.1093/nar/gkt953
<i>MEROPS</i>: the database of proteolytic enzymes, their substrates and inhibitors
resolves10.1093/nar/gkn663
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
resolves10.1038/nature12352
Insights into the phylogeny and coding potential of microbial dark matter
resolves10.1371/journal.pone.0009490
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
The 1 reference without a DOI — listed, not checked
no DOI — not checkedLever, M. A. Acetogenesis in the energy-starved deep biosphere—a paradox? Front. Microbiol. 2, 284 (2011).
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