Reference health

Transcriptomic and functional network features of lung squamous cell carcinoma through integrative analysis of GEO and TCGA data

https://doi.org/10.1038/s41598-018-34160-w

1 of 47 checkable references need attention · checked 2026-07-22

At the dated check, the references listed below either did not resolve in Crossref or DataCite, or carried a retraction notice. Each one is shown with the registry record that put it there.

1 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

References needing attention

marked retracted — notice via Crossref, record curated by Retraction Watch10.7150/jca.18848

PART1 expression is associated with poor prognosis and tumor recurrence in stage I-III non-small cell lung cancer

The 46 checked references that resolve

resolves10.3322/caac.21262

Global cancer statistics, 2012

resolves10.1002/ijc.29210

Cancer incidence and mortality worldwide: Sources, methods and major patterns in GLOBOCAN 2012

resolves10.15326/jcopdf.3.1.2015.0176

COPD Overlap Syndromes: Asthma and Beyond

resolves10.1016/S0140-6736(16)30958-8

Lung cancer: current therapies and new targeted treatments

resolves10.1038/ncponc1187

Strategies for discovering novel cancer biomarkers through utilization of emerging technologies

resolves10.1111/all.13222

Beyond epithelial‐to‐mesenchymal transition: Common suppression of differentiation programs underlies epithelial barrier dysfunction in mild, moderate, and severe asthma

resolves10.1002/0471142727.mb2201s101

Overview of DNA Microarrays: Types, Applications, and Their Future

resolves10.1038/nrg.2016.49

Coming of age: ten years of next-generation sequencing technologies

resolves10.1093/bioinformatics/bts034

The <tt>sva</tt> package for removing batch effects and other unwanted variation in high-throughput experiments

resolves10.1093/nar/gkv007

limma powers differential expression analyses for RNA-sequencing and microarray studies

resolves10.1093/nar/gkv1507

TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data

resolves10.1093/nar/gks042

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

resolves10.1101/gr.092759.109

Circos: An information aesthetic for comparative genomics

resolves10.1089/omi.2011.0118

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

resolves10.1101/265322

Moonlight: a tool for biological interpretation and driver genes discovery

resolves10.1093/bioinformatics/bty124

GDCRNATools : an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC

resolves10.1093/bioinformatics/bts344

miRcode: a map of putative microRNA target sites in the long non-coding transcriptome

resolves10.1093/nar/gkt1248

starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data

resolves10.1101/gr.1239303

Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

resolves10.1371/journal.pgen.1005689

Integration Analysis of Three Omics Data Using Penalized Regression Methods: An Application to Bladder Cancer

resolves10.1093/nar/gkj109

BioGRID: a general repository for interaction datasets

resolves10.1038/nmeth.4083

A scored human protein–protein interaction network to catalyze genomic interpretation

resolves10.1038/nmeth.4077

OmniPath: guidelines and gateway for literature-curated signaling pathway resources

resolves10.1186/1471-2105-4-2

An automated method for finding molecular complexes in large protein interaction networks

resolves10.1126/science.1099314

EGFR Mutations in Lung Cancer: Correlation with Clinical Response to Gefitinib Therapy

resolves10.1038/nature05945

Identification of the transforming EML4–ALK fusion gene in non-small-cell lung cancer

resolves10.1056/NEJMoa040938

Activating Mutations in the Epidermal Growth Factor Receptor Underlying Responsiveness of Non–Small-Cell Lung Cancer to Gefitinib

resolves10.1158/1078-0432.CCR-11-2109

Clarifying the Spectrum of Driver Oncogene Mutations in Biomarker-Verified Squamous Carcinoma of Lung: Lack of EGFR / KRA S and Presence of PIK3CA / AKT1 Mutations

resolves10.1089/cmb.2017.0056

A Joint Bayesian Model for Integrating Microarray and RNA Sequencing Transcriptomic Data

resolves10.1038/srep17954

Screening of the key volatile organic compounds of Tuber melanosporum fermentation by aroma sensory evaluation combination with principle component analysis

resolves10.1038/ng.3545

Mosaic loss of chromosome Y is associated with common variation near TCL1A

resolves10.1083/jcb.200211048

Rae1 is an essential mitotic checkpoint regulator that cooperates with Bub3 to prevent chromosome missegregation

resolves10.1038/ng1605

Plk4 haploinsufficiency causes mitotic infidelity and carcinogenesis

resolves10.1007/978-1-61779-252-6

Microtubule Dynamics

resolves10.1093/jnci/dju504

Combined Treatment Strategies for Microtubule Stabilizing Agent-Resistant Tumors

resolves10.1038/nrd.2017.258

Targeting telomeres

resolves10.1093/hmg/ddi075

Defective sister-chromatid cohesion, aneuploidy and cancer predisposition in a mouse model of type II Rothmund-Thomson syndrome

resolves10.1186/s13148-016-0226-1

Polycomb repressive complex’s evolutionary conserved function: the role of EZH2 status and cellular background

resolves10.1158/1078-0432.CCR-12-3946

EZH2 Protein Expression Associates with the Early Pathogenesis, Tumor Progression, and Prognosis of Non–Small Cell Lung Carcinoma

resolves10.3390/ijms18061172

EZH2 in Cancer Progression and Potential Application in Cancer Therapy: A Friend or Foe?

resolves10.1186/bcr3361

ABCC5 supports osteoclast formation and promotes breast cancer metastasis to bone

resolves10.18632/oncotarget.8261

KIF23 is an independent prognostic biomarker in glioma, transcriptionally regulated by TCF-4

resolves10.1016/j.gene.2018.04.014

Long non-coding RNA XIST sponges miR-34a to promotes colon cancer progression via Wnt/β-catenin signaling pathway

resolves10.1093/nar/gkq285

CREB up-regulates long non-coding RNA, HULC expression through interaction with microRNA-372 in liver cancer

resolves10.1042/BSR20171193

The pseudogene-derived long non-coding RNA SFTA1P suppresses cell proliferation, migration, and invasion in gastric cancer

resolves10.1096/fj.201701237RR

Long noncoding RNA SNHG1 promotes non‐small cell lung cancer progression by up‐regulating MTDH via sponging miR‐145–5p

The 1 reference without a DOI — listed, not checked

no DOI — not checkedLi, G. et al. Skewed X chromosome inactivation of blood cells is associated with early development of lung cancer in females. Oncology reports 16, 859–864 (2006).

What this badge says. CiteStamped means the CHECKABLE references of this work were clean at the dated check: each resolved to a known work in a public registry, and none carried a retraction notice at that time. It says nothing about the quality, findings, or importance of the work itself, and nothing about references deposited without a DOI.

checked 2026-07-22 — re-checked daily as this page is visited; titles and statuses come from Crossref and DataCite and are not part of the signed record

view as graph · paper page

Embed this badge

Both snippets point at the live badge image and link back to this page. The badge re-renders from the daily check, so an embed never goes stale by more than a day of visits.

<a href="https://citestamp.com/citestamped/10.1038/s41598-018-34160-w"><img src="https://citestamp.com/citestamped/10.1038/s41598-018-34160-w/badge.svg" alt="CiteStamped reference-health badge" width="460" height="64"></a>

[![CiteStamped reference-health badge](https://citestamp.com/citestamped/10.1038/s41598-018-34160-w/badge.svg)](https://citestamp.com/citestamped/10.1038/s41598-018-34160-w)