Reference health
Plastid phylogenomics of the Eriostemon group (Rutaceae; Zanthoxyloideae): support for major clades and investigation of a backbone polytomy
1 of 83 checkable references need attention · checked 2026-07-21
At the dated check, the references listed below either did not resolve in Crossref or DataCite, or carried a retraction notice. Each one is shown with the registry record that put it there.
19 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
References needing attention
does not resolve to a known work10.1043/02-64.1
The 82 checked references that resolve
resolves10.1071/SB23010
Using RADseq to resolve species boundaries in a morphologically complex group of yellow-flowered shrubs (Geleznowia, Rutaceae)
resolves10.1002/tax.12543
A new subfamily classification of the <i>Citrus</i> family (Rutaceae) based on six nuclear and plastid markers
resolves10.1080/0028825X.1979.10432565
Biotic pollination mechanisms in the Australian flora — a review
resolves10.1093/sysbio/syab035
A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life
resolves10.3732/ajb.1500463
Unraveling the biogeographical history of Chrysobalanaceae from plastid genomes
resolves10.1071/SB14033
A chloroplast phylogeny of Zieria (Rutaceae) in Australia and New Caledonia shows widespread incongruence with species-level taxonomy
resolves10.1071/SB22003
Phylogeny, classification and biogeography of Philotheca sect. Erionema (Rutaceae) based on nrDNA sequences
resolves10.1371/journal.pone.0072493
Major Clades of Australasian Rutoideae (Rutaceae) Based on rbcL and atpB Sequences
resolves10.1007/s00606-016-1344-0
Phylogeny, classification and biogeography of Halfordia (Rutaceae) in Australia and New Caledonia
resolves10.1071/SB21034
Big trees of small baskets: phylogeny of the Australian genus Spyridium (Rhamnaceae: Pomaderreae), focusing on biogeographic patterns and species circumscriptions
resolves10.1016/j.ympev.2007.02.030
A congruent molecular signature of vicariance across multiple plant lineages
resolves10.1007/BF00937293
Chemosystematics of theRutaceae: Suggestions for a more natural taxonomy and evolutionary interpretation of the family
resolves10.1093/sysbio/syab053
Defining Coalescent Genes: Theory Meets Practice in Organelle Phylogenomics
resolves10.1093/sysbio/syx076
Analysis of Phylogenomic Tree Space Resolves Relationships Among Marsupial Families
resolves10.1002/tax.12242
<i>Boronia</i> (Rutaceae) is polyphyletic: Reinstating <i>Cyanothamnus</i> and the problems associated with inappropriately defined outgroups
resolves10.1071/SB22018
Generic and infrageneric limits of Phebalium and its allies (Rutaceae: Zanthoxyloideae)
resolves10.1111/j.1558-5646.2008.00549.x
IS A NEW AND GENERAL THEORY OF MOLECULAR SYSTEMATICS EMERGING?
resolves10.1016/j.ympev.2018.05.018
Plastome sequences and exploration of tree-space help to resolve the phylogeny of riceflowers (Thymelaeaceae: Pimelea)
resolves10.1007/s00606-016-1277-7
Incongruent patterns of nuclear and chloroplast variation in Correa (Rutaceae): introgression and biogeography in south-eastern Australia
resolves10.1016/j.ympev.2019.05.022
Incongruence between gene trees and species trees and phylogenetic signal variation in plastid genes
resolves10.1016/j.ympev.2020.106903
Under the rug: Abandoning persistent misconceptions that obfuscate organelle evolution
resolves10.3897/phytokeys.19.3912
Chilean Pitavia more closely related to Oceania and Old World Rutaceae than to Neotropical groups: evidence from two cpDNA non-coding regions, with a new subfamilial classification of the family
resolves10.1093/sysbio/syq010
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
resolves10.1002/tax.12054
Resolving intergeneric relationships in the aervoid clade and the backbone of <i>Ptilotus</i> (Amaranthaceae): Evidence from whole plastid genomes and morphology
resolves10.1080/23802359.2017.1419082
The complete chloroplast genome of an aromatic Chinese pepper (
<i>Zanthoxylum simulans</i>
)
resolves10.1186/s13059-020-02154-5
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
resolves10.1093/sysbio/syy086
A Universal Probe Set for Targeted Sequencing of 353 Nuclear Genes from Any Flowering Plant Designed Using k-Medoids Clustering
resolves10.1111/1755-0998.12676
<scp>treespace</scp>: Statistical exploration of landscapes of phylogenetic trees
resolves10.3389/fpls.2023.1063174
Phylogenomic analyses of Sapindales support new family relationships, rapid Mid-Cretaceous Hothouse diversification, and heterogeneous histories of gene duplication
resolves10.1093/molbev/mst010
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
resolves10.1093/nar/gkf436
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
resolves10.1007/bf02100115
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea
resolves10.1007/BF02109483
Maximum likelihood inference of protein phylogeny and the origin of chloroplasts
resolves10.1093/sysbio/sys005
Searching for Ancestral Areas and Artifactual Centers of Origin in Biogeography: with Comment on East–West Patterns Across Southern Australia
resolves10.1093/molbev/msaa106
New Methods to Calculate Concordance Factors for Phylogenomic Datasets
resolves10.1093/molbev/msaa015
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era
resolves10.1007/s00606-004-0218-z
Molecular phylogeny of Phebalium (Rutaceae: Boronieae) and related genera based on the nrDNA regions ITS 1+2
resolves10.1038/s41598-017-02964-x
Updating the Phylogenetic Dating of New Caledonian Biodiversity with a Meta-analysis of the Available Evidence
resolves10.1007/s00606-019-01589-z
Phylogeography, classification and conservation of pink zieria (Zieria veronicea; Rutaceae): influence of changes in climate, geology and sea level in south-eastern Australia
resolves10.1098/rspb.2019.2546
Extinction pulse at Eocene–Oligocene boundary drives diversification dynamics of two Australian temperate floras
resolves10.1007/s00606-010-0315-0
Phylogeny and infrageneric classification of Correa Andrews (Rutaceae) on the basis of nuclear and chloroplast DNA
resolves10.1554/0014-3820(2001)055[0859:PNGCFM]2.0.CO;2
PREDICTING NUCLEAR GENE COALESCENCE FROM MITOCHONDRIAL DATA: THE THREE-TIMES RULE
resolves10.1111/j.2041-210X.2011.00169.x
phytools: an R package for phylogenetic comparative biology (and other things)
resolves10.1093/sysbio/sys029
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
resolves10.2307/2446155
Chloroplast DNA phylogeny, reticulate evolution, and biogeography of <i>Paeonia</i> (Paeoniaceae)
resolves10.3390/genes9030132
Testing for Polytomies in Phylogenetic Species Trees Using Quartet Frequencies
resolves10.1371/journal.pone.0195034
Chloroplast variation is incongruent with classification of the Australian bloodwood eucalypts (genus Corymbia, family Myrtaceae)
resolves10.1007/s10265-010-0379-5
Two micro-scale protocols for the isolation of DNA from polysaccharide-rich plant tissue
resolves10.1093/oxfordjournals.molbev.a026201
Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
resolves10.1071/BT9540287
Chromosome numbers in the Boronieae (Rutaceae) and their bearing on the evolutionary development of the tribe in the Australian flora
resolves10.1093/bioinformatics/btu033
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
resolves10.1073/pnas.94.13.6815
Likelihood-mapping: A simple method to visualize phylogenetic content of a sequence alignment
resolves10.7751/telopea14433
Morphological data indicate the subspecies of Leionema elatius (Rutaceae) are not conspecific
resolves10.1111/1467-9868.00293
Estimating the Number of Clusters in a Data Set Via the Gap Statistic
resolves10.1111/j.1365-294X.2012.05664.x
The biogeography of mitochondrial and nuclear discordance in animals
resolves10.1016/j.ympev.2015.11.021
Integration of complete chloroplast genome sequences with small amplicon datasets improves phylogenetic resolution in Acacia
resolves10.58828/nuy00001
A taxonomic revision of the genera
<i>Crowea</i>
,
<i>Eriostemon</i>
and
<i>Phebalium</i>
(Rutaceae)
resolves10.58828/nuy00300
A taxonomic review of the genera
<i>Eriostemon</i>
and
<i>Philotheca</i>
(Rutaceae: Boronieae)
resolves10.58828/nuy00301
New species and nomenclatural changes in
<i>Phebalium</i>
and related genera (Rutaceae)
resolves10.1073/pnas.84.24.9054
Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs.
resolves10.1038/ncomms5956
Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times
resolves10.1186/s12859-018-2129-y
ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
The 19 references without a DOI — listed, not checked
no DOI — not checkedPollination syndromes as generic determinants.
no DOI — not checked2025102322493138400_R5
no DOI — not checked2025102322493138400_R10
no DOI — not checked2025102322493138400_R13
no DOI — not checkedFloral biology of the Western Australian endemic ‘yellow bells’, Geleznowia verrucosa Turcz (Rutaceae).
no DOI — not checked2025102322493138400_R15
no DOI — not checked2025102322493138400_R26
no DOI — not checked2025102322493138400_R27
no DOI — not checked2025102322493138400_R28
no DOI — not checkedA new combination in Boronella (Rutaceae) and a view on relationships of the genus.
no DOI — not checkedMorphology and biogeography in Australasian–Malesian Rutaceae.
no DOI — not checkedNeoschmidia, a new genus of Rutaceae from New Caledonia.
no DOI — not checked2025102322493138400_R53
no DOI — not checked2025102322493138400_R55
no DOI — not checked2025102322493138400_R61
no DOI — not checked2025102322493138400_R65
no DOI — not checkedPhylogenetic consequences of cytoplasmic gene flow in plants.
no DOI — not checked2025102322493138400_R98
no DOI — not checked2025102322493138400_R99
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