Reference health
Rewiring of auxin signaling under persistent shade
43/43 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
1 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 43 checked references that resolve
resolves10.1146/annurev-arplant-050312-120221
Photoreceptor Signaling Networks in Plant Responses to Shade
resolves10.1073/pnas.1618990114
Light-mediated self-organization of sunflower stands increases oil yield in the field
resolves10.1093/mp/sss031
Phytochrome Signaling in Green Arabidopsis Seedlings: Impact Assessment of a Mutually Negative phyB–PIF Feedback Loop
resolves10.1111/j.1365-313X.2007.03341.x
Phytochrome‐mediated inhibition of shade avoidance involves degradation of growth‐promoting bHLH transcription factors
resolves10.1016/j.cell.2015.12.018
Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light
resolves10.1016/j.cub.2016.10.031
Integration of Phytochrome and Cryptochrome Signals Determines Plant Growth during Competition for Light
resolves10.1111/j.1365-313X.2012.05033.x
Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling
resolves10.1371/journal.pgen.1003244
A Quartet of PIF bHLH Factors Provides a Transcriptionally Centered Signaling Hub That Regulates Seedling Morphogenesis through Differential Expression-Patterning of Shared Target Genes in Arabidopsis
resolves10.1016/j.cell.2008.01.049
Rapid Synthesis of Auxin via a New Tryptophan-Dependent Pathway Is Required for Shade Avoidance in Plants
resolves10.1104/pp.114.241844
Cotyledon-Generated Auxin Is Required for Shade-Induced Hypocotyl Growth in <i>Brassica rapa</i>
resolves10.1073/pnas.1013457108
Auxin transport through PIN-FORMED 3 (PIN3) controls shade avoidance and fitness during competition
resolves10.1101/gad.283234.116
The epidermis coordinates auxin-induced stem growth in response to shade
resolves10.1073/pnas.1702276114
Local auxin production underlies a spatially restricted neighbor-detection response in
<i>Arabidopsis</i>
resolves10.1073/pnas.1702275114
Neighbor detection at the leaf tip adaptively regulates upward leaf movement through spatial auxin dynamics
resolves10.1038/msb.2011.39
The auxin signalling network translates dynamic input into robust patterning at the shoot apex
resolves10.1038/ncomms15706
Variation in auxin sensing guides AUX/IAA transcriptional repressor ubiquitylation and destruction
resolves10.1126/science.1126088
A Plant miRNA Contributes to Antibacterial Resistance by Repressing Auxin Signaling
resolves10.1104/pp.111.180083
miR393 and Secondary siRNAs Regulate Expression of the <i>TIR1</i>/<i>AFB2</i> Auxin Receptor Clade and Auxin-Related Development of Arabidopsis Leaves
resolves10.1007/BF00388211
The relationship between phytochrome-photoequilibrium and Development in light grown Chenopodium album L.
resolves10.1093/jxb/eru083
Plant proximity perception dynamically modulates hormone levels and sensitivity in Arabidopsis
resolves10.1111/nph.13449
Contrasting growth responses in lamina and petiole during neighbor detection depend on differential auxin responsiveness rather than different auxin levels
resolves10.1038/nplants.2015.90
Systematic analysis of how phytochrome B dimerization determines its specificity
resolves10.1038/emboj.2009.306
Inhibition of the shade avoidance response by formation of non‐DNA binding bHLH heterodimers
resolves10.1038/nature10182
The ELF4–ELF3–LUX complex links the circadian clock to diurnal control of hypocotyl growth
resolves10.1016/j.cub.2014.10.070
ELF3-PIF4 Interaction Regulates Plant Growth Independently of the Evening Complex
resolves10.1111/nph.13965
Convergence of <scp>CONSTITUTIVE PHOTOMORPHOGENESIS</scp> 1 and <scp>PHYTOCHROME INTERACTING FACTOR</scp> signalling during shade avoidance
resolves10.1105/tpc.018630
<i>MASSUGU2</i> Encodes Aux/IAA19, an Auxin-Regulated Protein That Functions Together with the Transcriptional Activator NPH4/ARF7 to Regulate Differential Growth Responses of Hypocotyl and Formation of Lateral Roots in <i>Arabidopsis thaliana</i>
resolves10.1111/nph.12994
Distinct subclades of <scp><i>Aux/IAA</i></scp> genes are direct targets of <scp>ARF</scp>5/<scp>MP</scp> transcriptional regulation
resolves10.1111/j.1365-313X.2010.04476.x
Automated analysis of hypocotyl growth dynamics during shade avoidance in Arabidopsis
resolves10.1073/pnas.1320355111
Light intensity modulates the regulatory network of the shade avoidance response in
<i>Arabidopsis</i>
resolves10.1104/pp.113.234021
Phytochrome B Promotes Branching in Arabidopsis by Suppressing Auxin Signaling
resolves10.1093/pcp/pcr076
PHYTOCHROME-INTERACTING FACTOR 4 and 5 (PIF4 and PIF5) Activate the Homeobox ATHB2 and Auxin-Inducible IAA29 Genes in the Coincidence Mechanism Underlying Photoperiodic Control of Plant Growth of Arabidopsis thaliana
resolves10.1105/tpc.113.112417
PIF4 and PIF5 Transcription Factors Link Blue Light and Auxin to Regulate the Phototropic Response in Arabidopsis
The 1 reference without a DOI — listed, not checked
no DOI — not checkedD Das, KR St Onge, LA Voesenek, R Pierik, R Sasidharan, Ethylene- and shade-induced hypocotyl elongation share transcriptome patterns and functional regulators. Plant Physiol 172, 718–733 (2016).
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