Reference health
The genome of Populus alba x Populus tremula var. glandulosa clone 84K
42/42 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
5 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 42 checked references that resolve
resolves10.1016/j.tplants.2003.11.006
Poplar genome sequence: functional genomics in an ecologically dominant plant species
resolves10.1126/science.1128691
The Genome of Black Cottonwood,
<i>Populus trichocarpa</i>
(Torr. & Gray)
resolves10.1093/gigascience/gix075
The draft genome sequence of a desert tree <i>Populus pruinosa</i>
resolves10.1111/pbi.12989
Genome sequence and genetic transformation of a widely distributed and cultivated poplar
resolves10.1093/pcp/pcl018
Genetic Transformation of
Populus trichocarpa
Genotype Nisqually-1: A Functional Genomic Tool for Woody Plants
resolves10.1111/j.1467-7652.2012.00714.x
Enhanced expression of glutamine synthetase (<i>GS1a</i>) confers altered fibre and wood chemistry in field grown hybrid poplar (<i>Populus tremula</i> X <i>alba</i>) (717‐1B4)
resolves10.1111/j.1467-7652.2009.00483.x
Characterization and varied expression of a membrane‐bound endo‐β‐1,4‐glucanase in hybrid poplar
resolves10.1093/treephys/tpw046
Overexpression of<i>PtrMYB119</i>, a R2R3-MYB transcription factor from<i>Populus trichocarpa</i>, promotes anthocyanin production in hybrid poplar
resolves10.1515/sg-2016-0019
Whole-genome draft assembly of <i>Populus tremula</i> x <i>P. alba</i> clone INRA 717-1B4
resolves10.1016/j.chemosphere.2012.09.044
Transgenic poplar trees expressing yeast cadmium factor 1 exhibit the characteristics necessary for the phytoremediation of mine tailing soil
resolves10.1126/science.220.4601.1049
Rapid Flow Cytometric Analysis of the Cell Cycle in Intact Plant Tissues
resolves10.1101/gr.215087.116
Canu: scalable and accurate long-read assembly via adaptive
<i>k</i>
-mer weighting and repeat separation
resolves10.1038/nmeth.2474
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
resolves10.1371/journal.pone.0112963
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
resolves10.1371/journal.pone.0147209
Genome Sequences of Populus tremula Chloroplast and Mitochondrion: Implications for Holistic Poplar Breeding
resolves10.1038/nbt.2727
Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions
resolves10.1093/bioinformatics/btv351
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
resolves10.1101/gr.107524.110
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
resolves10.1002/0471250953.bi0410s05
Using <scp>Repeat</scp><scp>Masker</scp> to Identify Repetitive Elements in Genomic Sequences
resolves10.1186/s13100-015-0041-9
Repbase Update, a database of repetitive elements in eukaryotic genomes
resolves10.1093/nar/gkw413
tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes
resolves10.1093/nar/gkr1293
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
resolves10.1073/pnas.1801437115
Functional and evolutionary genomic inferences in
<i>Populus</i>
through genome and population sequencing of American and European aspen
resolves10.1093/gbe/evr001
Correlation between Nuclear Plastid DNA Abundance and Plastid Number Supports the Limited Transfer Window Hypothesis
resolves10.1093/bioinformatics/btw369
Assemblytics: a web analytics tool for the detection of variants from an assembly
resolves10.1038/nbt.3122
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
resolves10.1093/bioinformatics/btp616
<tt>edgeR</tt>
: a Bioconductor package for differential expression analysis of digital gene expression data
resolves10.1186/s13059-015-0721-2
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
The 5 references without a DOI — listed, not checked
no DOI — not checkedBiology of Populus and Its Implications for Management and Conservation
no DOI — not checkedIsolation of plant DNA from fresh tissue
no DOI — not checked2019101708291036700_dsz020-B17
no DOI — not checked2019101708291036700_dsz020-B27
no DOI — not checkedAssessing genome assembly quality using the LTR Assembly Index (LAI)
What this badge says. CiteStamped means the CHECKABLE references of this
work were clean at the dated check: each resolved to a known work in a public registry, and none
carried a retraction notice at that time. It says nothing about the quality, findings,
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