Reference health

MetaboAnalyst 6.0: towards a unified platform for metabolomics data processing, analysis and interpretation

https://doi.org/10.1093/nar/gkae253
CiteStamped reference-health badge
71/71 checkable references clean · checked 2026-07-24

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

The 71 checked references that resolve
resolves10.1038/s41586-019-1237-9
Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases
resolves10.1016/j.foodchem.2021.130685
Metabolomics: An analytical technique for food processing evaluation
resolves10.1152/physrev.00035.2018
Metabolomics for Investigating Physiological and Pathophysiological Processes
resolves10.1126/science.aay3164
The exposome and health: Where chemistry meets biology
resolves10.1038/s41392-023-01380-0
To metabolomics and beyond: a technological portfolio to investigate cancer metabolism
resolves10.1093/nar/gkp356
MetaboAnalyst: a web server for metabolomic data analysis and interpretation
resolves10.1093/nar/gks374
MetaboAnalyst 2.0--a comprehensive server for metabolomic data analysis
resolves10.1093/nar/gkv380
MetaboAnalyst 3.0—making metabolomics more meaningful
resolves10.1093/nar/gky310
MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis
resolves10.1093/nar/gkab382
MetaboAnalyst 5.0: narrowing the gap between raw spectra and functional insights
resolves10.1038/s41596-022-00710-w
Using MetaboAnalyst 5.0 for LC–HRMS spectra processing, multi-omics integration and covariate adjustment of global metabolomics data
resolves10.3390/molecules27082580
Development and Application of an LC-MS/MS Untargeted Exposomics Method with a Separated Pooled Quality Control Strategy
resolves10.1038/nmeth.3393
MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis
resolves10.3390/metabo13070826
mGWAS-Explorer 2.0: Causal Analysis and Interpretation of Metabolite–Phenotype Associations
resolves10.1038/ng.2982
An atlas of genetic influences on human blood metabolites
resolves10.1038/s41588-022-01270-1
Genomic atlas of the plasma metabolome prioritizes metabolites implicated in human diseases
resolves10.7554/eLife.34408
The MR-Base platform supports systematic causal inference across the human phenome
resolves10.1038/s43586-021-00092-5
Mendelian randomization
resolves10.1016/j.envint.2021.106893
Dose-response metabolomics and pathway sensitivity to map molecular cartography of bisphenol A exposure
resolves10.1093/toxsci/kft094
Temporal Concordance Between Apical and Transcriptional Points of Departure for Chemical Risk Assessment
resolves10.1021/acs.analchem.9b03811
Dose-Response Metabolomics To Understand Biochemical Mechanisms and Off-Target Drug Effects with the TOXcms Software
resolves10.1038/s41467-023-39889-1
Trackable and scalable LC-MS metabolomics data processing using asari
resolves10.1021/ac300698c
XCMS Online: A Web-Based Platform to Process Untargeted Metabolomic Data
resolves10.1038/s41587-023-01690-2
Integrative analysis of multimodal mass spectrometry data in MZmine 3
resolves10.1021/acs.analchem.7b01069
Detailed Investigation and Comparison of the XCMS and MZmine 2 Chromatogram Construction and Chromatographic Peak Detection Methods for Preprocessing Mass Spectrometry Metabolomics Data
resolves10.3390/metabo10050186
MetaboAnalystR 3.0: Toward an Optimized Workflow for Global Metabolomics
resolves10.1021/jasms.0c00478
Recognizing Contamination Fragment Ions in Liquid Chromatography–Tandem Mass Spectrometry Data
resolves10.1038/s41592-021-01195-3
DecoID improves identification rates in metabolomics through database-assisted MS/MS deconvolution
resolves10.1021/acs.analchem.9b02655
DecoMetDIA: Deconvolution of Multiplexed MS/MS Spectra for Metabolite Identification in SWATH-MS-Based Untargeted Metabolomics
resolves10.1038/s41592-021-01331-z
Spectral entropy outperforms MS/MS dot product similarity for small-molecule compound identification
resolves10.1038/s41592-023-01850-x
BUDDY: molecular formula discovery via bottom-up MS/MS interrogation
resolves10.1093/nar/gkac1010
The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource
resolves10.1371/journal.pgen.1007081
Orienting the causal relationship between imprecisely measured traits using GWAS summary data
resolves10.1002/mpr.1608
A tutorial on conducting genome‐wide association studies: Quality control and statistical analysis
resolves10.1038/s41431-022-01038-5
Understanding the assumptions underlying Mendelian randomization
resolves10.1289/ehp.814223
Modeling of dose-response relationships.
resolves10.14573/altex.1309261
Pathways of Toxicity
resolves10.1093/bioinformatics/btaa700
FastBMD: an online tool for rapid benchmark dose–response analysis of transcriptomics data
resolves10.1002/cpz1.922
Using ExpressAnalyst for Comprehensive Gene Expression Analysis in Model and Non‐Model Organisms
resolves10.1093/nar/gkab1062
HMDB 5.0: the Human Metabolome Database for 2022
resolves10.1093/nar/gkac963
KEGG for taxonomy-based analysis of pathways and genomes
resolves10.1002/cpz1.217
Exploring Chemical Information in PubChem
resolves10.1038/s41596-020-0317-5
Reproducible molecular networking of untargeted mass spectrometry data using GNPS
resolves10.1002/jms.1777
MassBank: a public repository for sharing mass spectral data for life sciences
resolves10.1186/s13321-015-0087-1
MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics
resolves10.1038/nmeth.2551
LipidBlast in silico tandem mass spectrometry database for lipid identification
resolves10.1038/s41592-019-0358-2
A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms
resolves10.1016/j.phytochem.2012.07.007
RIKEN tandem mass spectral database (ReSpect) for phytochemicals: A plant-specific MS/MS-based data resource and database
resolves10.1016/j.phytochem.2020.112427
BMDMS-NP: A comprehensive ESI-MS/MS spectral library of natural compounds
resolves10.1038/s41587-020-0531-2
A lipidome atlas in MS-DIAL 4
resolves10.1021/jasms.1c00343
Neutral Loss Mass Spectral Data Enhances Molecular Similarity Analysis in METLIN
resolves10.1093/nar/gkaa1067
MarkerDB: an online database of molecular biomarkers
resolves10.1093/bioinformatics/btac726
RaMP-DB 2.0: a renovated knowledgebase for deriving biological and chemical insight from metabolites, proteins, and genes
resolves10.1093/bioinformatics/bti476
ANOVA-simultaneous component analysis (ASCA): a new tool for analyzing designed metabolomics data
resolves10.1093/nar/gkv007
limma powers differential expression analyses for RNA-sequencing and microarray studies
resolves10.1371/journal.pcbi.1003123
Predicting Network Activity from High Throughput Metabolomics
resolves10.1093/bib/bbac553
Comprehensive investigation of pathway enrichment methods for functional interpretation of LC–MS global metabolomics data
resolves10.1038/nbt.2377
A cross-platform toolkit for mass spectrometry and proteomics
resolves10.1007/978-1-4939-6747-6_23
Data Conversion with ProteoWizard msConvert
resolves10.1038/s41387-018-0017-1
Role of carnitine and its derivatives in the development and management of type 2 diabetes
resolves10.2337/diacare.27.8.2047
Caffeine Impairs Glucose Metabolism in Type 2 Diabetes
resolves10.1007/978-3-319-15630-9_7
Diabetes and Tryptophan Metabolism
resolves10.1042/BST20140156
Deregulated coenzyme A, loss of metabolic flexibility and diabetes
resolves10.3390/cells11111737
Homocysteine Metabolism Pathway Is Involved in the Control of Glucose Homeostasis: A Cystathionine Beta Synthase Deficiency Study in Mouse
resolves10.1093/bioinformatics/btu813
Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics
resolves10.1093/nar/gky301
MetExplore: collaborative edition and exploration of metabolic networks
resolves10.1093/nar/gkac376
OmicsNet 2.0: a web-based platform for multi-omics integration and network visual analytics
resolves10.1093/nar/gkad407
MicrobiomeAnalyst 2.0: comprehensive statistical, functional and integrative analysis of microbiome data
resolves10.1038/s41467-023-38785-y
ExpressAnalyst: A unified platform for RNA-sequencing analysis in non-model species
resolves10.1093/nar/gkab394
OmicsAnalyst: a comprehensive web-based platform for visual analytics of multi-omics data
resolves10.1038/s41586-023-05881-4
Foundation models for generalist medical artificial intelligence
What this badge says. CiteStamped means the CHECKABLE references of this work were clean at the dated check: each resolved to a known work in a public registry, and none carried a retraction notice at that time. It says nothing about the quality, findings, or importance of the work itself, and nothing about references deposited without a DOI.

checked 2026-07-24 — re-checked daily as this page is visited; titles and statuses come from Crossref and DataCite and are not part of the signed record

Embed this badge

Both snippets point at the live badge image and link back to this page. The badge re-renders from the daily check, so an embed never goes stale by more than a day of visits.

<a href="https://citestamp.com/citestamped/10.1093/nar/gkae253"><img src="https://citestamp.com/citestamped/10.1093/nar/gkae253/badge.svg" alt="CiteStamped reference-health badge" width="460" height="64"></a>
[![CiteStamped reference-health badge](https://citestamp.com/citestamped/10.1093/nar/gkae253/badge.svg)](https://citestamp.com/citestamped/10.1093/nar/gkae253)