Reference health
BUSCA: an integrative web server to predict subcellular localization of proteins
22/22 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
3 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 22 checked references that resolve
resolves10.1093/bfgp/eln003
The prediction of protein subcellular localization from sequence: a shortcut to functional genome annotation
resolves10.1093/bioinformatics/btv367
TPpred3 detects and discriminates mitochondrial and chloroplastic targeting peptides in eukaryotic proteins
resolves10.1093/bioinformatics/btg1027
An ENSEMBLE machine learning approach for
the prediction of all-alpha membrane proteins
resolves10.1093/bioinformatics/bts728
BETAWARE: a machine-learning tool to detect and predict transmembrane beta-barrel proteins in prokaryotes
resolves10.1093/bioinformatics/btr108
MemLoci: predicting subcellular localization of membrane proteins in eukaryotes
resolves10.1093/bioinformatics/btw656
SChloro: directing <i>Viridiplantae</i> proteins to six chloroplastic sub-compartments
resolves10.1186/s13059-016-1037-6
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
resolves10.1093/bioinformatics/btw473
Functional classification of CATH superfamilies: a domain-based approach for protein function annotation
resolves10.1093/bioinformatics/btt110
Parametric Bayesian priors and better choice of negative examples improve protein function prediction
resolves10.1186/s13742-015-0083-4
The PFP and ESG protein function prediction methods in 2014: effect of database updates and ensemble approaches
resolves10.1186/1471-2105-14-S3-S1
Protein function prediction by massive integration of evolutionary analyses and multiple data sources
resolves10.1186/1471-2105-14-S3-S8
MS-k NN: protein function prediction by integrating multiple data sources
resolves10.1186/1471-2105-14-S3-S9
A domain-centric solution to functional genomics via dcGO Predictor
resolves10.1016/j.ymeth.2015.08.009
GoFDR: A sequence alignment based method for predicting protein functions
resolves10.1093/bioinformatics/btx219
SubCons: a new ensemble method for improved human subcellular localization predictions
resolves10.1002/pro.3297
The SubCons webserver: A user friendly web interface for state‐of‐the‐art subcellular localization prediction
resolves10.1093/bioinformatics/btx431
DeepLoc: prediction of protein subcellular localization using deep learning
The 3 references without a DOI — listed, not checked
no DOI — not checkedPredicting Subcellular Localization of Proteins by Bioinformatic Algorithms
no DOI — not checkedDeepSig: deep learning improves signal peptide detection in proteins
no DOI — not checkedExploring biomolecular literature with EVEX: Connecting genes through events, homology, and indirect associations
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