Reference health
Phylogenetic Signal and Bias in Paleontology
77/77 checkable references clean · checked 2026-10-17
Every reference with a DOI or an arXiv id in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
8 with no DOI or arXiv id: not checked. A reference deposited without a DOI is checked only when it names an arXiv id, under that id’s DataCite DOI. The rest are never matched by title or guessed at; they stay outside the checked set, and this line says so.
The 77 checked references that resolve
resolves10.1186/1471-2148-7-108
A web-database of mammalian morphology and a reanalysis of placental phylogeny
resolves10.1671/0272-4634(2005)025[0911:NMOCML]2.0.CO;2
New material of<i>Centetodon</i>(Mammalia, Lipotyphla) and the importance of (missing) DNA sequences in systematic paleontology
resolves10.1023/A:1025504124129
Relationships of Endemic African Mammals and Their Fossil Relatives Based on Morphological and Molecular Evidence
resolves10.1016/j.cub.2007.05.035
Genetic Structure and Extinction of the Woolly Mammoth, Mammuthus primigenius
resolves10.1098/rspb.2018.1632
Improvements in the fossil record may largely resolve current conflicts between morphological and molecular estimates of mammal phylogeny
resolves10.1093/sysbio/46.3.479
Morphology, Fossils, Divergence Timing, and the Phylogenetic Relationships of Gavialis
resolves10.1038/s41586-019-1555-y
Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny
resolves10.1016/j.cub.2019.05.043
Ancient Mitogenomes Reveal the Evolutionary History and Biogeography of Sloths
resolves10.1093/gbe/evx168
Investigating Difficult Nodes in the Placental Mammal Tree with Expanded Taxon Sampling and Thousands of Ultraconserved Elements
resolves10.2307/2412923
Cases in which Parsimony or Compatibility Methods Will be Positively Misleading
resolves10.1098/rspb.2019.0091
Does exceptional preservation distort our view of disparity in the fossil record?
resolves10.1111/cla.12170
Resolution of a concatenation/coalescence kerfuffle: partitioned coalescence support and a robust family‐level tree for Mammalia
resolves10.1111/j.1096-0031.1999.tb00268.x
Corroboration among Data Sets in Simultaneous Analysis: Hidden Support for Phylogenetic Relationships among Higher Level Artiodactyl Taxa
resolves10.1111/j.1096-0031.2008.00209.x
Weighting against homoplasy improves phylogenetic analysis of morphological data sets
resolves10.1111/cla.12160
<scp>TNT</scp> version 1.5, including a full implementation of phylogenetic morphometrics
resolves10.1111/pala.12353
Parsimony and model‐based phylogenetic methods for morphological data: comments on O'Reilly <i>et al</i>.
resolves10.1016/j.ympev.2015.08.023
Effects of missing data on topological inference using a Total Evidence approach
resolves10.1098/rsbl.2015.1003
Assessment of available anatomical characters for linking living mammals to fossil taxa in phylogenetic analyses
resolves10.1098/rspb.2018.2418
Rapid morphological evolution in placental mammals post-dates the origin of the crown group
resolves10.1038/s41586-018-0126-y
Late-surviving stem mammal links the lowermost Cretaceous of North America and Gondwana
resolves10.1080/10635150490423962
Accepting Partnership by Submission? Morphological Phylogenetics in a Molecular Millennium
resolves10.1111/pala.12314
Comparative experimental taphonomy of eight marine arthropods indicates distinct differences in preservation potential
resolves10.1093/sysbio/syv052
A Nonstationary Markov Model Detects Directional Evolution in Hymenopteran Morphology
resolves10.1093/sysbio/syaa023
Death is on Our Side: Paleontological Data Drastically Modify Phylogenetic Hypotheses
resolves10.1038/s41586-020-2234-8
Skeleton of a Cretaceous mammal from Madagascar reflects long-term insularity
resolves10.1111/j.1420-9101.2009.01843.x
Strong morphological support for the molecular evolutionary tree of placental mammals
resolves10.1111/j.1096-3642.2006.00293.x
Higher-order phylogeny of modern birds (Theropoda, Aves: Neornithes) based on comparative anatomy. II. Analysis and discussion
resolves10.1186/s12862-014-0222-z
Decay of velvet worms (Onychophora), and bias in the fossil record of lobopodians
resolves10.1017/pab.2015.11
Using experimental decay of modern forms to reconstruct the early evolution and morphology of fossil enteropneusts
resolves10.1126/science.1229237
The Placental Mammal Ancestor and the Post–K-Pg Radiation of Placentals
resolves10.1093/sysbio/syu044
Maximum Likelihood Inference of Small Trees in the Presence of Long Branches
resolves10.1093/sysbio/syu077
Phylogeny, Paleontology, and Primates: Do Incomplete Fossils Bias the Tree of Life?
resolves10.1038/nature15697
A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
resolves10.1093/sysbio/syx041
Why Do Phylogenomic Data Sets Yield Conflicting Trees? Data Type Influences the Avian Tree of Life more than Taxon Sampling
resolves10.1016/j.tig.2004.03.007
Molecular timescales and the fossil record: a paleontological perspective
resolves10.1093/sysbio/sys058
A Total-Evidence Approach to Dating with Fossils, Applied to the Early Radiation of the Hymenoptera
resolves10.1093/sysbio/sys029
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
resolves10.7554/eLife.46205
Cretaceous dinosaur bone contains recent organic material and provides an environment conducive to microbial communities
resolves10.1093/bioinformatics/btu157
tqDist: a library for computing the quartet and triplet distances between binary or general trees
resolves10.1038/srep32817
Preservation and phylogeny of Cambrian ecdysozoans tested by experimental decay of Priapulus
resolves10.1038/srep02545
Fossilization causes organisms to appear erroneously primitive by distorting evolutionary trees
resolves10.1038/nature08429
Convergent evolution of anthropoid-like adaptations in Eocene adapiform primates
resolves10.1038/s41586-018-0455-x
The genome of the offspring of a Neanderthal mother and a Denisovan father
resolves10.1006/mpev.1998.0488
What Does Palaeontology Contribute to Systematics in a Molecular World?
resolves10.1098/rsbl.2018.0632
Bayesian and parsimony approaches reconstruct informative trees from simulated morphological datasets
resolves10.1080/10635150701491149
The Adequacy of Morphology for Reconstructing the Early History of Placental Mammals
resolves10.3389/fgene.2019.01241
Evolutionary Models for the Diversification of Placental Mammals Across the KPg Boundary
resolves10.1371/journal.pone.0049521
Macroevolutionary Dynamics and Historical Biogeography of Primate Diversification Inferred from a Species Supermatrix
resolves10.1080/106351501750435086
Bias in Phylogenetic Estimation and Its Relevance to the Choice between Parsimony and Likelihood Methods
resolves10.1093/gbe/evv261
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
resolves10.1111/j.1439-0469.2012.00670.x
The interpretation of hidden support in combined data phylogenetics
resolves10.1371/journal.pbio.3000494
Inferring the mammal tree: Species-level sets of phylogenies for questions in ecology, evolution, and conservation
resolves10.1093/sysbio/syp012
Paleontology, Genomics, and Combined-Data Phylogenetics: Can Molecular Data Improve Phylogeny Estimation for Fossil Taxa?
resolves10.1093/sysbio/syq048
Combining Phylogenomics and Fossils in Higher-Level Squamate Reptile Phylogeny: Molecular Data Change the Placement of Fossil Taxa
resolves10.1016/j.cub.2016.10.029
Phylogenomics and Morphology of Extinct Paleognaths Reveal the Origin and Evolution of the Ratites
resolves10.1126/science.aau9345
New Jurassic mammaliaform sheds light on early evolution of mammal-like hyoid bones
The 8 references with no DOI or arXiv id, listed, not checked
no DOI — not checkedAncient dates or accelerated rates?
no DOI — not checkedConstraints on the timescale of animal evolutionary history
no DOI — not checked2022061708595801900_B18
no DOI — not checkedPhylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny
no DOI — not checkedTaxonomic congruence versus total evidence, and amniote phylogeny inferred from fossils, molecules, and morphology
no DOI — not checkedAvian higher-level phylogeny: well-supported clades and what we can learn from a phylogenetic analysis of 2954 morphological characters
no DOI — not checkedDental data perform relatively poorly in reconstructing mammal phylogenies: morphological partitions evaluated with molecular benchmarks
no DOI — not checkedPAUP*: phylogenetic analysis using parsimony (*and other methods). Version 4
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