Reference health
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
31/31 checkable references clean · checked 2026-09-02
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
1 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 31 checked references that resolve
resolves10.1093/bioinformatics/btg427
Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference
resolves10.1093/sysbio/syr100
BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics
resolves10.1093/molbev/msr095
Inferring Speciation and Extinction Rates under Different Sampling Schemes
resolves10.1093/molbev/msh123
Bayesian Phylogenetic Model Selection Using Reversible Jump Markov Chain Monte Carlo
resolves10.1080/10635150801886156
Efficiency of Markov Chain Monte Carlo Tree Proposals in Bayesian Phylogenetics
resolves10.1093/oxfordjournals.molbev.a026160
Markov Chasin Monte Carlo Algorithms for the Bayesian Analysis of Phylogenetic Trees
resolves10.1080/10635150701429982
Species Trees from Gene Trees: Reconstructing Bayesian Posterior Distributions of a Species Phylogeny Using Estimated Gene Tree Distributions
resolves10.1080/10618600.1997.10474731
Phylogenetic Inference for Binary Data on Dendograms Using Markov Chain Monte Carlo
resolves10.1111/j.0006-341X.1999.00001.x
Bayesian Phylogenetic Inference via Markov Chain Monte Carlo Methods
resolves10.1111/j.2517-6161.1994.tb01956.x
Approximate Bayesian Inference with the Weighted Likelihood Bootstrap
resolves10.1146/annurev.ento.54.110807.090529
Bayesian Phylogenetics and Its Influence on Insect Systematics
resolves10.1016/j.jtbi.2009.07.018
On incomplete sampling under birth–death models and connections to the sampling-based coalescent
resolves10.1093/oxfordjournals.molbev.a003872
Bayesian Selection of Continuous-Time Markov Chain Evolutionary Models
resolves10.1080/10635150290102456
Divergence Time and Evolutionary Rate Estimation with Multilocus Data
resolves10.1093/sysbio/syq085
Improving Marginal Likelihood Estimation for Bayesian Phylogenetic Model Selection
resolves10.1093/oxfordjournals.molbev.a025811
Bayesian phylogenetic inference using DNA sequences: a Markov Chain Monte Carlo Method
The 1 reference without a DOI — listed, not checked
no DOI — not checkedForthcoming
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