Reference health
Personal and population genomics of human regulatory variation
45/45 checkable references clean · checked 2026-07-14
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a publisher retraction, withdrawal, or removal notice.
6 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 45 checked references that resolve
resolves10.1101/gr.086652.108
Constructing genomic maps of positive selection in humans: Where do we go from here?
resolves10.1371/journal.pbio.0020286
Population History and Natural Selection Shape Patterns of Genetic Variation in 132 Genes
resolves10.1073/pnas.162046399
A strong signature of balancing selection in the 5′
<i>cis</i>
-regulatory region of
<i>CCR5</i>
resolves10.1111/j.2517-6161.1995.tb02031.x
Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
resolves10.1093/oxfordjournals.molbev.a004169
Evolution of Transcription Factor Binding Sites in Mammalian Gene Regulatory Regions: Conservation and Turnover
resolves10.1186/1471-2105-11-10
MSOAR 2.0: Incorporating tandem duplications into ortholog assignment based on genome rearrangement
resolves10.1038/nature05874
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
resolves10.1093/nar/5.9.3157
DNAase footprinting a simple method for the detection of protein-DNA binding specificity
resolves10.1038/nmeth.1313
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting
resolves10.1006/jmbi.2000.3519
Computational identification of Cis -regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae 1 1Edited by F. E. Cohen
resolves10.1126/science.1200609
<i>DAXX</i>
/
<i>ATRX</i>
,
<i>MEN1</i>
, and mTOR Pathway Genes Are Frequently Altered in Pancreatic Neuroendocrine Tumors
resolves10.1126/science.1116238
SLC24A5, a Putative Cation Exchanger, Affects Pigmentation in Zebrafish and Humans
resolves10.1371/journal.pcbi.0020005
Genome-Wide Identification of Human Functional DNA Using a Neutral Indel Model
resolves10.1093/bioinformatics/btq559
Robust relationship inference in genome-wide association studies
resolves10.1371/journal.pgen.1000471
Widespread Genomic Signatures of Natural Selection in Hominid Evolution
resolves10.1101/gr.108795.110
Massive turnover of functional sequence in human and other mammalian genomes
resolves10.1038/ng.518
Somatic mutations altering EZH2 (Tyr641) in follicular and diffuse large B-cell lymphomas of germinal-center origin
resolves10.1038/nature11212
An expansive human regulatory lexicon encoded in transcription factor footprints
resolves10.1055/s-2007-993152
Insulin Resistance - The Role of Ethnicity: Evidence from Caucasian and African Cohorts
resolves10.1371/journal.pone.0000678
The Evolution of Gene Expression QTL in Saccharomyces cerevisiae
resolves10.1126/science.1186176
Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding
resolves10.1186/1479-7364-1-4-274
The genomic distribution of population substructure in four populations using 8,525 autosomal SNPs
resolves10.1186/gb-2011-12-9-127
The promise and limitations of population exomics for human evolution studies
resolves10.1016/j.gde.2005.05.002
Prediction of cis-regulatory elements using binding site matrices — the successes, the failures and the reasons for both
resolves10.1038/nature03441
Systematic discovery of regulatory motifs in human promoters and 3′ UTRs by comparison of several mammals
The 6 references without a DOI — listed, not checked
no DOI — not checkedThe ENCODE Project Consortium. 2012. An integrated encyclopedia of DNA elements in the human genome. Nature (in press).
no DOI — not checkedHartl DL , Clark AG . 1997. Principles of population genetics, 3rd ed. Sinauer Associates, Sunderland, Massachusetts.
no DOI — not checkedTRANSFAC: Transcriptional regulation, from patterns to profiles
no DOI — not checkedEvolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
no DOI — not checkedThurman RE , Rynes E , Humbert R , Vierstra J , Maurano MT , Haugen E , Sheffield NC , Stergachis AB , Wang H , Vernot B , . 2012. The accessible chromatin landscape of the human genome. Nature (in press).
no DOI — not checkedChromatin remodeling and cancer, part I: Covalent histone modifications
What this badge says. CiteStamped means the CHECKABLE references of this
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carried a publisher retraction notice at that time. It says nothing about the quality, findings,
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