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<i>SmartGrain</i>: High-Throughput Phenotyping Software for Measuring Seed Shape through Image Analysis      

https://doi.org/10.1104/pp.112.205120
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25/25 checkable references clean · checked 2026-07-22

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

5 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

The 25 checked references that resolve
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Development of a Controlled Vocabulary and Software Application to Analyze Fruit Shape Variation in Tomato and Other Plant Species
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GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein
resolves10.1104/pp.109.140558
High-Throughput Quantification of Root Growth Using a Novel Image-Analysis Tool    
resolves10.1186/1746-4811-7-3
Rapid analysis of seed size in Arabidopsis for mutant and QTL discovery
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Variation in heading date conceals quantitative trait loci for other traits of importance in breeding selection of rice
resolves10.1007/s00122-010-1275-z
Detection of quantitative trait loci controlling pre-harvest sprouting resistance by using backcrossed populations of japonica rice cultivars
resolves10.1007/s11032-009-9319-2
Genome-wide association study of grain shape variation among Oryza sativa L. germplasms based on elliptic Fourier analysis
resolves10.1093/jhered/93.5.384
SHAPE: A Computer Program Package for Quantitative Evaluation of Biological Shapes Based on Elliptic Fourier Descriptors
resolves10.1016/0888-7543(87)90010-3
MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations
resolves10.1038/ng.977
Natural variation in GS5 plays an important role in regulating grain size and yield in rice
resolves10.1007/s00122-008-0833-0
Novel QTLs for photoperiodic flowering revealed by using reciprocal backcross inbred lines from crosses between japonica rice cultivars
resolves10.1270/jsbbs.60.648
Core single-nucleotide polymorphisms-a tool for genetic analysis of the Japanese rice population
resolves10.1038/ng.169
Deletion in a gene associated with grain size increased yields during rice domestication
resolves10.1038/ng2014
A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase
resolves10.1016/0734-189X(85)90016-7
Topological structural analysis of digitized binary images by border following
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Development of Automatic Segmentation Software for Efficient Measurement of Area on the Digital Images of Plant Organs
resolves10.1104/pp.108.134072
HYPOTrace: Image Analysis Software for Measuring Hypocotyl Growth and Shape Demonstrated on Arabidopsis Seedlings Undergoing Photomorphogenesis
resolves10.1038/ng.2327
Control of grain size, shape and quality by OsSPL16 in rice
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TECHNICAL ADVANCE: LeafAnalyser: a computational method for rapid and large‐scale analyses of leaf shape variation
resolves10.1038/cr.2008.307
Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
resolves10.1186/1471-2164-11-267
Fine definition of the pedigree haplotypes of closely related rice cultivars by means of genome-wide discovery of single-nucleotide polymorphisms
resolves10.1073/pnas.90.23.10972
Theoretical basis for separation of multiple linked gene effects in mapping quantitative trait loci.
resolves10.1093/genetics/136.4.1457
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The 5 references without a DOI — listed, not checked
no DOI — not checked2021041911451441300_b1
no DOI — not checkedThe morphology and varietal characteristics of the rice plant
no DOI — not checked2021041911451441300_b11
no DOI — not checked2021041911451441300_b30
no DOI — not checkedOpenCV Developers Team (2012) OpenCV Reference Manual. http://opencv.org/documentation.html (July 31, 2012)
What this badge says. CiteStamped means the CHECKABLE references of this work were clean at the dated check: each resolved to a known work in a public registry, and none carried a retraction notice at that time. It says nothing about the quality, findings, or importance of the work itself, and nothing about references deposited without a DOI.

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