Reference health
Of mammals and bacteria in a rainforest: Temporal dynamics of soil bacteria in response to simulated N pulse from mammalian urine
68/68 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
11 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 68 checked references that resolve
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A direct test of nitrogen and phosphorus limitation to net primary productivity in a lowland tropical wet forest
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Methane and sulfate profiles within the subsurface of a tidal flat are reflected by the distribution of sulfate-reducing bacteria and methanogenic archaea
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A new method for non‐parametric multivariate analysis of variance
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Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest
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Molybdenum limitation of asymbiotic nitrogen fixation in tropical forest soils
resolves10.1111/j.1365-2745.2006.01143.x
Spatial distributions of plants and gross N transformation rates in a forest soil
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Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
resolves10.1080/17550874.2014.984786
A slide down a slippery slope – alpine ecosystem responses to nitrogen deposition
resolves10.1007/978-3-662-49902-3_11
The Biogeochemistry of the Main Forest Vegetation Types in Amazonia
resolves10.1111/j.1462-2920.2010.02189.x
The effect of nutrient deposition on bacterial communities in Arctic tundra soil
resolves10.1111/j.1461-0248.2004.00628.x
Diversity and composition of tropical soil nitrifiers across a plant diversity gradient and among land‐use types
resolves10.1890/0012-9658(2000)081[1402:TFSODC]2.0.CO;2
THE FUNCTIONAL SIGNIFICANCE OF DENITRIFIER COMMUNITY COMPOSITION IN A TERRESTRIAL ECOSYSTEM
resolves10.1007/BF01945546
On the genesis of the soil mantle of the region of Manaus, Central Amazonia, Brazil
resolves10.1093/bioinformatics/bts342
Associating microbiome composition with environmental covariates using generalized UniFrac distances
resolves10.1016/j.foreco.2004.03.017
Response of soil microbial biomass and community composition to chronic nitrogen additions at Harvard forest
resolves10.1371/journal.pone.0067884
Long-Term Nitrogen Amendment Alters the Diversity and Assemblage of Soil Bacterial Communities in Tallgrass Prairie
resolves10.1007/s10533-013-9908-3
Nitrogen-oxide emissions from tropical forest soils exposed to elevated nitrogen input strongly interact with rainfall quantity and seasonality
resolves10.1007/s10021-009-9290-0
Biological Nitrogen Fixation in Two Tropical Forests: Ecosystem-Level Patterns and Effects of Nitrogen Fertilization
resolves10.1890/10-0459.1
Changes in microbial community characteristics and soil organic matter with nitrogen additions in two tropical forests
resolves10.1111/1365-2435.12329
Interactive effects of <scp>C</scp>,<scp> N</scp> and <scp>P</scp> fertilization on soil microbial community structure and function in an <scp>A</scp>mazonian rain forest
resolves10.1007/s00248-009-9517-9
The Biogeography of Ammonia-Oxidizing Bacterial Communities in Soil
resolves10.1016/j.agee.2005.06.009
Biological nitrogen fixation in secondary regrowth and mature rainforest of central Amazonia
resolves10.1128/AEM.06435-11
Denitrifying Bacteria from the Genus Rhodanobacter Dominate Bacterial Communities in the Highly Contaminated Subsurface of a Nuclear Legacy Waste Site
resolves10.1007/s004420050604
Biomass and mineral element responses of a Serengeti short-grass species to nitrogen supply and defoliation: compensation requires a critical [N]
resolves10.1371/journal.pone.0088141
Network Analysis Reveals Ecological Links between N-Fixing Bacteria and Wood-Decaying Fungi
resolves10.1029/JD093iD02p01600
Emissions of N<sub>2</sub>O from tropical forest soils: Response to fertilization with NH<sub>4</sub><sup>+</sup>, NO<sub>3</sub><sup>−</sup>, and PO<sub>4</sub><sup>3−</sup>
resolves10.1128/AEM.68.7.3206-3214.2002
Members of the Family
<i>Comamonadaceae</i>
as Primary Poly(3-Hydroxybutyrate-co-3-Hydroxyvalerate)-Degrading Denitrifiers in Activated Sludge as Revealed by a Polyphasic Approach
resolves10.1016/j.soilbio.2006.08.010
Bacterial diversity of terra preta and pristine forest soil from the Western Amazon
resolves10.1111/j.1365-2486.2008.01826.x
Immediate and long‐term nitrogen oxide emissions from tropical forest soils exposed to elevated nitrogen input
resolves10.1016/0038-0717(88)90040-5
Influence of nitrogen on the number of N2-fixing and total bacteria in the rhizosphere
resolves10.1099/ijs.0.02793-0
Nitratireductor aquibiodomus gen. nov., sp. nov., a novel α-proteobacterium from the marine denitrification system of the Montreal Biodome (Canada)
resolves10.1007/s00248-007-9320-4
Role of Productivity and Protozoan Abundance for the Occurrence of Predation-resistant Bacteria in Aquatic Systems
resolves10.2307/2260661
The Ecology and Genetics of Fitness in Forest Plants. II. Microspatial Heterogeneity of the Edaphic Environment
resolves10.1007/s00248-016-0730-z
Responses of Soil Bacterial Communities to Nitrogen Deposition and Precipitation Increment Are Closely Linked with Aboveground Community Variation
resolves10.1111/nph.12243
Fungal community analysis by high‐throughput sequencing of amplified markers – a user's guide
resolves10.1128/AEM.71.12.8228-8235.2005
UniFrac: a New Phylogenetic Method for Comparing Microbial Communities
resolves10.1890/1051-0761(1997)007[0402:BROFET]2.0.CO;2
BIOGEOCHEMICAL RESPONSE OF FOREST ECOSYSTEMS TO SIMULATED CHRONIC NITROGEN DEPOSITION
resolves10.1007/s00248-011-9973-x
Fungal Community Composition in Neotropical Rain Forests: the Influence of Tree Diversity and Precipitation
resolves10.1098/rstb.1999.0524
Effects of nitrogen and phosphorus fertilization in a lowland evergreen rainforest
resolves10.1111/j.1462-2920.2008.01701.x
The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria
resolves10.1007/s00572-013-0507-x
Arbuscular mycorrhizal fungal communities along a pedo-hydrological gradient in a Central Amazonian terra firme forest
resolves10.3389/fmicb.2016.01045
Ecology of Nitrogen Fixing, Nitrifying, and Denitrifying Microorganisms in Tropical Forest Soils
resolves10.1016/j.envpol.2007.04.024
Interpreting nitrogen pollution thresholds for sensitive habitats: The importance of concentration versus dose
resolves10.1371/journal.pone.0009490
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
resolves10.1016/j.tim.2012.08.001
Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation
resolves10.1111/j.1365-2486.2012.02639.x
Consistent effects of nitrogen amendments on soil microbial communities and processes across biomes
resolves10.1007/s00442-010-1649-6
Microbial community shifts influence patterns in tropical forest nitrogen fixation
resolves10.1890/06-0219
MICROBIAL STRESS-RESPONSE PHYSIOLOGY AND ITS IMPLICATIONS FOR ECOSYSTEM FUNCTION
resolves10.1017/CBO9780511541926.011
Microbial community composition and soil nitrogen cycling: is there really a connection?
resolves10.1034/j.1600-0706.2003.12287.x
Can ungulates foraging in a multiple‐use landscape alter forest nitrogen budgets?
resolves10.1007/s002489900183
Temporal and Spatial Distribution of the nifH Gene of N 2 Fixing Bacteria in Forests and Clearcuts in Western Oregon
resolves10.1007/s00248-012-0028-8
Tropical Soil Bacterial Communities in Malaysia: pH Dominates in the Equatorial Tropics Too
resolves10.1007/BF00023752
Nutrient limitations to plant growth during primary succession in Hawaii Volcanoes National Park
resolves10.1128/AEM.00062-07
Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
resolves10.1890/10-1558.1
Potassium, phosphorus, or nitrogen limit root allocation, tree growth, or litter production in a lowland tropical forest
resolves10.1007/s00253-015-6532-2
Evaluation of simultaneous autotrophic and heterotrophic denitrification processes and bacterial community structure analysis
The 11 references without a DOI — listed, not checked
no DOI — not checkedChemical analysis of ecological materials
no DOI — not checkedEcology
no DOI — not checkedIDRISI selva manual
no DOI — not checkedWater analysis: Some revised methods for limnologists
no DOI — not checkedphyloseq: An R package for reproducible interactive analysis and graphics of microbiome census data
no DOI — not checkedOksanen J. Blanchet F. G. Kindt R. Legendre P. Minchin P. R. O'Hara R. B. …Wagner H. (2016).Vegan: Community ecology package. R package version 2.3‐5.http://CRAN.R-project.org/package=vegan.
no DOI — not checkedAdvances in agronomy
no DOI — not checkedR: A language and environment for statistical computing
no DOI — not checkedFlora da Reserva Ducke. Guia de identificacao das plantas vasculares de uma floresta de terra‐firme na Amazonia Central
no DOI — not checkedSpecies coexistence. Ecological and evolutionary perspectives
no DOI — not checkedAnálise química para avaliação da fertilidade de solos tropicais
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