Reference health
Genotyping‐by‐sequencing in ecological and conservation genomics
48/48 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
The 48 checked references that resolve
resolves10.1111/mec.12276
<scp>RAD</scp>seq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
resolves10.1371/journal.pone.0003376
Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
resolves10.1073/pnas.1018580108
Rapid evolution of disease resistance is accompanied by functional changes in gene expression in a wild bird
resolves10.1111/mec.12105
Population genomics based on low coverage sequencing: how low should we go?
resolves10.1534/g3.111.000240
<i>Stacks</i>: Building and Genotyping Loci <i>De Novo</i> From Short-Read Sequences
resolves10.1111/mec.12330
The population structure and recent colonization history of<scp>O</scp>regon threespine stickleback determined using restriction‐site associated<scp>DNA</scp>‐sequencing
resolves10.1111/mec.12174
High degree of cryptic population differentiation in the <scp>B</scp>altic <scp>S</scp>ea herring <i><scp>C</scp>lupea harengus</i>
resolves10.1038/nrg3012
Genome-wide genetic marker discovery and genotyping using next-generation sequencing
resolves10.1111/mec.12084
Special features of<scp>RAD</scp>Sequencing data: implications for genotyping
resolves10.1111/mec.12081
Transcriptome‐wide polymorphisms of red abalone (<i><scp>H</scp>aliotis rufescens</i>) reveal patterns of gene flow and local adaptation
resolves10.1371/journal.pone.0019379
A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
resolves10.1111/mec.12127
Mapping phenotypic, expression and transmission ratio distortion <scp>QTL</scp> using <scp>RAD</scp> markers in the Lake Whitefish <i>(Coregonus clupeaformis)</i>
resolves10.1111/mec.12089
The effect of<scp>RAD</scp>allele dropout on the estimation of genetic variation within and between populations
resolves10.1111/mec.12082
Genome‐wide association reveals genetic basis for the propensity to migrate in wild populations of rainbow and steelhead trout
resolves10.1111/mec.12150
Population genomics of <scp>P</scp>acific lamprey: adaptive variation in a highly dispersive species
resolves10.1073/pnas.0903103106
Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
resolves10.1371/journal.pgen.1000862
Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags
resolves10.1111/j.1755-0998.2010.02967.x
Next‐generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout
resolves10.1111/mec.12239
Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired‐end RAD sequencing
resolves10.1111/mec.12155
Mixing of vineyard and oak‐tree ecotypes of <i><scp>S</scp>accharomyces cerevisiae</i> in <scp>N</scp>orth <scp>A</scp>merican vineyards
resolves10.1111/mec.12269
The evolutionary history of <i><scp>X</scp>iphophorus</i> fish and their sexually selected sword: a genome‐wide approach using restriction site‐associated <scp>DNA</scp> sequencing
resolves10.1111/mec.12083
Population genomic signatures of divergent adaptation, gene flow and hybrid speciation in the rapid radiation of<scp>L</scp>ake<scp>V</scp>ictoria cichlid fishes
resolves10.1111/j.1365-294X.2011.05308.x
Joint analysis of demography and selection in population genetics: where do we stand and where could we go?
resolves10.1111/j.1365-294X.2010.04839.x
Adaptation of redband trout in desert and montane environments
resolves10.1111/mec.12240
Thermal adaptation and acclimation of ectotherms from differing aquatic climates
resolves10.1111/mec.12234
Sturgeon conservation genomics: <scp>SNP</scp> discovery and validation using <scp>RAD</scp> sequencing
resolves10.1371/journal.pone.0001172
Complexity Reduction of Polymorphic Sequences (CRoPS™): A Novel Approach for Large-Scale Polymorphism Discovery in Complex Genomes
resolves10.1111/j.1365-294X.2012.05513.x
Genome‐wide association genetics of an adaptive trait in lodgepole pine
resolves10.1111/mec.12201
The genomic consequences of adaptive divergence and reproductive isolation between species of manakins
resolves10.1371/journal.pone.0037135
Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
resolves10.1111/mec.12228
Going where traditional markers have not gone before: utility of and promise for <scp>RAD</scp> sequencing in marine invertebrate phylogeography and population genomics
resolves10.1111/mec.12262
RAD‐Seq derived markers flank the shell colour and banding loci of the <i>Cepaea nemoralis</i> supergene
resolves10.1111/mec.12311
Genomic evidence for the parallel evolution of coastal forms in the <i>Senecio lautus</i> complex
resolves10.1111/mec.12322
Recombination in the threespine stickleback genome—patterns and consequences
resolves10.1111/j.1755-0998.2010.02979.x
Single‐nucleotide polymorphism (SNP) discovery and applications of SNP genotyping in nonmodel organisms
resolves10.1111/mec.12242
Reference‐free <scp>SNP</scp> discovery for the <scp>E</scp>urasian beaver from restriction site–associated <scp>DNA</scp> paired‐end data
resolves10.1371/journal.pone.0030906
Efficient Exact Maximum a Posteriori Computation for Bayesian SNP Genotyping in Polyploids
resolves10.1073/pnas.0905224106
Evolutionary and functional insights into the mechanism underlying high-altitude adaptation of deer mouse hemoglobin
resolves10.1111/mec.12120
Genetic basis of male colour dimorphism in a <scp>L</scp>ake <scp>T</scp>anganyika cichlid fish
resolves10.1111/mec.12131
Genome sequence of dwarf birch (<i>Betula nana</i>) and cross‐species <scp>RAD</scp> markers
resolves10.1111/mec.12343
Adaptive evolution during an ongoing range expansion: the invasive bank vole (<i><scp>M</scp>yodes glareolus</i>) in <scp>I</scp>reland
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