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Physiological and transcriptomic characterization of submergence and reoxygenation responses in soybean seedlings

https://doi.org/10.1111/pce.12277
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72/72 checkable references clean · checked 2026-07-22

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

2 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

The 72 checked references that resolve
resolves10.1104/pp.105.1.53
The Response of Maize Seedlings of Different Ages to Hypoxic and Anoxic Stress (Changes in Induction of Adh1 mRNA, ADH Activity, and Survival of Anoxia)
resolves10.2135/cropsci1999.0011183X003900010023x
Soybean Root Morphological and Anatomical Traits Associated with Acclimation to Flooding
resolves10.1016/j.pbi.2010.08.002
Life in the balance: a signaling network controlling survival of flooding
resolves10.1016/j.tplants.2011.12.004
Making sense of low oxygen sensing
resolves10.1104/pp.112.208173
Waterproofing Crops: Effective Flooding Survival Strategies
resolves10.1126/science.1071505
RopGAP4-Dependent Rop GTPase Rheostat Control of <i>Arabidopsis</i> Oxygen Deprivation Tolerance
resolves10.1111/j.1365-313X.2008.03642.x
Selective mRNA translation coordinates energetic and metabolic adjustments to cellular oxygen deprivation and reoxygenation in <i>Arabidopsis thaliana</i>
resolves10.1093/bioinformatics/btq431
A framework for oligonucleotide microarray preprocessing
resolves10.1093/pcp/pcp163
Global Gene Expression Responses to Waterlogging in Roots and Leaves of Cotton (Gossypium hirsutum L.)
resolves10.1093/aobpla/plr030
A perspective on underwater photosynthesis in submerged terrestrial wetland plants
resolves10.1016/S0168-9452(03)00146-8
Importance of active oxygen-scavenging system in the recovery of rice seedlings after submergence
resolves10.1016/j.tplants.2004.07.005
Plant responses to hypoxia – is survival a balancing act?
resolves10.1073/pnas.0807821105
Submergence tolerance conferred by <i>Sub1A</i> is mediated by SLR1 and SLRL1 restriction of gibberellin responses in rice
resolves10.1016/j.pbi.2013.02.003
Genetic mechanisms conferring adaptation to submergence and drought in rice: simple or complex?
resolves10.1093/jxb/erg140
Genetic and biochemical analysis of anaerobically-induced enzymes during seed germination of Echinochloa crus-galli varieties tolerant and intolerant of anoxia
resolves10.1105/tpc.106.043000
A Variable Cluster of Ethylene Response Factor–Like Genes Regulates Metabolic and Developmental Acclimation Responses to Submergence in Rice
resolves10.1105/tpc.110.080325
The Submergence Tolerance Regulator SUB1A Mediates Crosstalk between Submergence and Drought Tolerance in Rice  
resolves10.1104/pp.112.207738
The Submergence Tolerance Gene <i>SUB1A</i> Delays Leaf Senescence under Prolonged Darkness through Hormonal Regulation in Rice    
resolves10.1186/gb-2004-5-10-r80
Bioconductor: open software development for computational biology and bioinformatics
resolves10.1038/nature10534
Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants
resolves10.1093/aob/mcl040
Apoptosis-like Programmed Cell Death Occurs in Procambium and Ground Meristem of Pea (Pisum sativum) Root Tips Exposed to Sudden Flooding
resolves10.1021/pr801051m
Proteome Analysis of Early-Stage Soybean Seedlings under Flooding Stress
resolves10.1038/nature08258
The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water
resolves10.1104/pp.110.155077
Arabidopsis <i>RAP2.2</i> : An Ethylene Response Transcription Factor That Is Important for Hypoxia Survival    
resolves10.1111/j.1365-313X.2010.04124.x
Research on plant abiotic stress responses in the post‐genome era: past, present and future
resolves10.1007/s004250050524
Improving the thiobarbituric acid-reactive-substances assay for estimating lipid peroxidation in plant tissues containing anthocyanin and other interfering compounds
resolves10.1093/jxb/eri141
Regulation of flooding tolerance of SAG12:ipt Arabidopsis plants by cytokinin
resolves10.1104/pp.103.022244
Enhanced Low Oxygen Survival in Arabidopsis through Increased Metabolic Flux in the Fermentative Pathway
resolves10.1104/pp.91.3.837
Hypoxic Induction of Anoxia Tolerance in Root Tips of <i>Zea mays</i>
resolves10.1016/S0098-8472(01)00126-5
Metabolic changes in rice seedlings with different submergence tolerance after desubmergence
resolves10.1093/jexbot/51.suppl_1.417
Multiple paths of sugar‐sensing and a sugar/oxygen overlap for genes of sucrose and ethanol metabolism
resolves10.1021/pr900460x
A Comprehensive Analysis of the Soybean Genes and Proteins Expressed under Flooding Stress using Transcriptome and Proteome Techniques
resolves10.1007/s11103-011-9812-y
Characterization of a novel flooding stress-responsive alcohol dehydrogenase expressed in soybean roots
resolves10.1104/pp.108.125989
Differential Response of Gray Poplar Leaves and Roots Underpins Stress Adaptation during Hypoxia  
resolves10.1371/journal.pone.0046487
Evaluation of Candidate Reference Genes for Normalization of Quantitative RT-PCR in Soybean Tissues under Various Abiotic Stress Conditions
resolves10.1111/j.1469-8137.2010.03590.x
Molecular characterization of the submergence response of the <i>Arabidopsis thaliana</i> ecotype Columbia
resolves10.1111/j.1365-313X.2010.04149.x
HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana
resolves10.1038/nature10536
Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization
resolves10.2135/cropsci1998.0011183X003800060028x
Waterlogging Effects on Growth and Yield Components in Late‐Planted Soybean
resolves10.1006/meth.2001.1262
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method
resolves10.1093/aob/mcp203
Escape from water or remain quiescent? Lotus tenuis changes its strategy depending on depth of submergence
resolves10.1104/pp.105.064725
Submergence-Induced Morphological, Anatomical, and Biochemical Responses in a Terrestrial Species Affect Gas Diffusion Resistance and Photosynthetic Performance
resolves10.1073/pnas.0906131106
Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in <i>Arabidopsis</i>
resolves10.1104/pp.109.151845
Cross-Kingdom Comparison of Transcriptomic Adjustments to Low-Oxygen Stress Highlights Conserved and Plant-Specific Responses
resolves10.1104/pp.105.073783
Genome-Wide Analysis of the ERF Gene Family in Arabidopsis and Rice
resolves10.1104/pp.124.2.587
Expression of a Gene Encoding Mitochondrial Aldehyde Dehydrogenase in Rice Increases under Submerged Conditions
resolves10.1021/pr100179f
Comparative Proteomic Analysis of Early-Stage Soybean Seedlings Responses to Flooding by Using Gel and Gel-Free Techniques
resolves10.1007/s11103-011-9799-4
Transcriptional responses to flooding stress in roots including hypocotyl of soybean seedlings
resolves10.1021/pr200701y
Mass Spectrometry-Based Analysis of Proteomic Changes in the Root Tips of Flooded Soybean Seedlings
resolves10.1021/pr4002349
Identification of Indicator Proteins Associated with Flooding Injury in Soybean Seedlings Using Label-free Quantitative Proteomics
resolves10.1104/pp.100.1.489
Molecular Characterization of the Soybean Alcohol Dehydrogenase Gene Family Amplified in Vitro by the Polymerase Chain Reaction
resolves10.2135/cropsci2011.09.0466
Mapping of Quantitative Trait Loci Associated with Resistance to <i>Phytophthora sojae</i> and Flooding Tolerance in Soybean
resolves10.1111/j.1365-313X.2011.04605.x
Expression of rice SUB1A and SUB1C transcription factors in Arabidopsis uncovers flowering inhibition as a submergence tolerance mechanism
resolves10.1023/A:1020470224740
The chequered history of the development and use of simultaneous equations for the accurate determination of chlorophylls a and b
resolves10.1104/pp.92.2.401
The Anaerobic Response of Soybean
resolves10.1038/nprot.2008.73
Analyzing real-time PCR data by the comparative CT method
resolves10.1126/science.164.3879.585
Alcohol Dehydrogenase in Maize: Genetic Basis for Multiple Isozymes
resolves10.1093/aob/mcq123
Stem hypertrophic lenticels and secondary aerenchyma enable oxygen transport to roots of soybean in flooded soil
resolves10.2202/1544-6115.1027
Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments
resolves10.1105/tpc.112.101790
Emerging Roots Alter Epidermal Cell Fate through Mechanical and Reactive Oxygen Species Signaling
resolves10.1093/aob/mcf210
Molecular and Cellular Adaptations of Maize to Flooding Stress
resolves10.1093/molbev/msr121
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
resolves10.1111/j.1365-313X.2004.02016.x
<scp>mapman</scp> : a user‐driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes
resolves10.1093/aob/mci272
Aerenchyma Formation and Recovery from Hypoxia of the Flooded Root System of Nodulated Soybean
resolves10.1016/S0014-5793(03)00631-8
Induction of mitochondrial aldehyde dehydrogenase by submergence facilitates oxidation of acetaldehyde during re‐aeration in rice
resolves10.1186/1471-2105-7-535
PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments
resolves10.2135/cropsci1994.0011183X003400040051x
Genetic Variability for Flooding Tolerance in Soybeans
resolves10.2135/cropsci2001.4141247x
Identification of a QTL Associated with Tolerance of Soybean to Soil Waterlogging
resolves10.1111/j.1365-313X.2010.04262.x
Hormonal interplay during adventitious root formation in flooded tomato plants
resolves10.2135/cropsci2001.1857
Flooding and Temperature Effects on Soybean Germination
resolves10.1038/nature04920
Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
resolves10.1104/pp.121.2.599
Rapid Repression of Maize Invertases by Low Oxygen. Invertase/Sucrose Synthase Balance, Sugar Signaling Potential, and Seedling Survival
The 2 references without a DOI — listed, not checked
no DOI — not checkedFAOSTAT. (2012) Retrieved fromhttp://faostat.fao.org.
no DOI — not checkedEffects of manipulation of pyruvate decarboxylase and alcohol dehydrogenase levels on the submergence tolerance of rice
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