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Microbial‐based systems for aquaculture of fish and shrimp: an updated review

https://doi.org/10.1111/raq.12058
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Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

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The 112 checked references that resolve
resolves10.1111/j.1439-0426.1994.tb00163.x
The release of nutrients and organic matter from aquaculture systems in Nordic countries
resolves10.1016/j.aquaculture.2005.01.020
Response of juvenile brown tiger shrimp (Penaeus esculentus) to intensive culture conditions in a flow through tank system with three-dimensional artificial substrate
resolves10.1016/j.aquaculture.2008.11.011
Effects of addition of tilapia Oreochromis niloticus and substrates for periphyton developments on pond ecology and production in C/N-controlled freshwater prawn Macrobrachium rosenbergii farming systems
resolves10.1016/j.aquaculture.2010.05.035
Effects of C/N ratio and substrate addition on natural food communities in freshwater prawn monoculture ponds
resolves10.1016/j.aquaculture.2010.01.025
Effects of carbohydrate source for maintaining a high C:N ratio and fish driven re-suspension on pond ecology and production in periphyton-based freshwater prawn culture systems
resolves10.4067/S0718-19572010000300017
Nitrogen budget in intensive cultures of Litopenaeus vannamei in mesocosms, with zero water exchange and artificial substrates
resolves10.1111/j.1365-2109.2010.02725.x
Water quality, production parameters and nutritional condition of Litopenaeus vannamei (Boone, 1931) grown intensively in zero water exchange mesocosms with artificial substrates
resolves10.3856/vol40-issue2-fulltext-19
Culture of white shrimp (Litopenaeus vannamei Boone, 1931) with zero water exchange and no food addition: an eco friendly approach
resolves10.1016/S0044-8486(99)00085-X
Carbon/nitrogen ratio as a control element in aquaculture systems
resolves10.1016/j.aquaculture.2006.11.025
Feeding with microbial flocs by tilapia in minimal discharge bio-flocs technology ponds
resolves10.1016/j.aquaculture.2008.10.009
Evaluation of nitrogen uptake and excretion by tilapia in bio floc tanks, using 15N tracing
resolves10.3354/meps010257
The Ecological Role of Water-Column Microbes in the Sea
resolves10.1016/j.aquaculture.2008.06.036
The biofloc technology (BFT) in indoor tanks: Water quality, biofloc composition, and growth and welfare of Nile tilapia (Oreochromis niloticus)
resolves10.1046/j.1365-2109.2003.00802.x
Ingestion and utilization of periphyton grown on artificial substrates by Nile tilapia, <i>Oreochromis niloticus</i> L.
resolves10.1016/j.biortech.2007.07.063
Microbial protein production in activated suspension tanks manipulating C:N ratio in feed and the implications for fish culture
resolves10.1016/j.vetmic.2006.01.009
The role of probiotics in aquaculture
resolves10.1016/j.aquaculture.2007.04.003
Nursery of the pink shrimp Farfantepenaeus paulensis in cages with artificial substrates: Biofilm composition and shrimp performance
resolves10.1016/j.watres.2004.07.014
Recent advances in removing phosphorus from wastewater and its future use as fertilizer (1997–2003)
resolves10.1016/j.watres.2003.09.022
Microalgae growth-promoting bacteria as “helpers” for microalgae: a novel approach for removing ammonium and phosphorus from municipal wastewater
resolves10.1100/2012/723654
Production Response and Digestive Enzymatic Activity of the Pacific White Shrimp<i>Litopenaeus vannamei</i>(Boone, 1931) Intensively Pregrown in Microbial Heterotrophic and Autotrophic-Based Systems
resolves10.1016/j.fsi.2005.03.008
The use of immunostimulants in fish larval aquaculture
resolves10.1128/AEM.01399-08
Bacteria Associated with Benthic Diatoms from Lake Constance: Phylogeny and Influences on Diatom Growth and Secretion of Extracellular Polymeric Substances
resolves10.1016/S0044-8486(00)00589-5
The fate of nitrogenous waste from shrimp feeding
resolves10.1016/S0044-8486(03)00541-6
The contribution of flocculated material to shrimp (Litopenaeus vannamei) nutrition in a high-intensity, zero-exchange system
resolves10.1111/j.1365-2109.1998.tb01110.x
Bacteria in shrimp pond sediments: their role in mineralizing nutrients and some suggested sampling strategies
resolves10.1016/S0043-1354(01)00266-4
Evolution of size distribution and transfer of mineral particles between flocs in activated sludges: an insight into floc exchange dynamics
resolves10.1016/j.copbio.2010.04.001
Bioremediation of aquaculture wastes
resolves10.1046/j.1365-2109.2001.00564.x
Effects of variable feed allowance with constant energy and ratio of energy to protein in a diet for constant protein input on the growth of common carp <i>Cyprinus carpio</i> L.
resolves10.1016/j.aquaeng.2004.09.005
Characterization of water quality factors during intensive raceway production of juvenile Litopenaeus vannamei using limited discharge and biosecure management tools
resolves10.1007/978-94-007-1327-7_10
Benthic Diatoms in Biofilm Culture
resolves10.1111/j.1749-7345.2011.00512.x
Performance of Pacific White Shrimp, <i>Litopenaeus vannamei</i>, Reared in Zero‐Exchange Tank Systems Exposed to Different Light Sources and Intensities
resolves10.1016/j.aquaculture.2007.05.006
Nitrogen removal techniques in aquaculture for a sustainable production
resolves10.1016/j.aquaeng.2008.12.004
Bio-flocs technology application in over-wintering of tilapia
resolves10.1111/j.1365-2109.2009.02353.x
The effect of different carbon sources on the nutritional value of bioflocs, a feed for<i>Macrobrachium rosenbergii</i>postlarvae
resolves10.1016/S0144-8609(98)00015-6
The design, management and production of a recirculating raceway system for the production of marine shrimp
resolves10.1016/j.aquaculture.2008.02.019
The basics of bio-flocs technology: The added value for aquaculture
resolves10.1111/j.1749-7345.2007.00111.x
Effect of Shrimp Stocking Density on Size‐fractionated Phytoplankton and Ecological Groups of Ciliated Protozoa within Zero‐water Exchange Shrimp Culture Systems
resolves10.1016/S0022-0981(00)00259-8
Effects of temperature and salinity on nitrogenous excretion by Litopenaeus vannamei juveniles
resolves10.1016/j.aquaculture.2006.03.019
Engineering analysis of the stoichiometry of photoautotrophic, autotrophic, and heterotrophic removal of ammonia–nitrogen in aquaculture systems
resolves10.4308/hjb.17.3.125
Primary Nutritional Content of Bio-Flocs Cultured with Different Organic Carbon Sources and Salinity
resolves10.1111/j.1365-2109.2006.01584.x
Effect of dietary probiotic Biogen<sup>�</sup>supplementation as a growth promoter on growth performance and feed utilization of Nile tilapia Oreochromis niloticus (L.)
resolves10.1007/s10499-010-9408-6
Effect of biofloc technology (BFT) on the early postlarval stage of pink shrimp Farfantepenaeus paulensis: growth performance, floc composition and salinity stress tolerance
resolves10.1111/j.1365-2109.2011.02848.x
Biofloc technology application as a food source in a limited water exchange nursery system for pink shrimp Farfantepenaeus brasiliensis (Latreille, 1817)
resolves10.1111/j.1365-2109.2011.03012.x
Floc contribution on spawning performance of blue shrimp<i>Litopenaeus stylirostris</i>
resolves10.1007/s10499-013-9640-y
Evaluation of biofloc technology in pink shrimp Farfantepenaeus duorarum culture: growth performance, water quality, microorganisms profile and proximate analysis of biofloc
resolves10.5772/53902
Biofloc Technology (BFT): A Review for Aquaculture Application and Animal Food Industry
resolves10.1111/are.12117
Biofloc technology in intensive broodstock farming of the pink shrimp<i>Farfantepenaeus duorarum</i>: spawning performance, biochemical composition and fatty acid profile of eggs
resolves10.1111/j.1365-2095.2007.00556.x
Contribution of microorganisms to the biofilm nutritional quality: protein and lipid contents
resolves10.1016/j.aquaculture.2011.08.034
Effect of calcium hydroxide, carbonate and sodium bicarbonate on water quality and zootechnical performance of shrimp Litopenaeus vannamei reared in bio-flocs technology (BFT) systems
resolves10.1080/10454430802329762
Planktonic and Biochemical Composition of Periphyton Grown on Some Biodegradable and Non-Degradable Substrates
resolves10.1300/J028v19n03_02
Effect of Periphyton and Supplementary Feeding on Growth Performance and Nutritive Physiology of Nile Tilapia,<i>Oreochromis niloticus</i>, and Pearlspot,<i>Etroplus suratensis</i>, Under Polyculture
resolves10.1016/j.aquaculture.2012.04.008
The importance of selective breeding in aquaculture to meet future demands for animal protein: A review
resolves10.1111/j.1753-5131.2009.01006.x
Exploring the nutritional demand for essential fatty acids by aquaculture species
resolves10.1139/f96-242
Stable isotope evidence for dietary overlap between two planktivorous fishes in aquaculture ponds
resolves10.1016/j.aquaculture.2005.06.044
The effect of carbohydrate addition on water quality and the nitrogen budget in extensive shrimp culture systems
resolves10.2298/ABS1203895A
Evaluation of culturable, nitrifying, ammonium-oxidizing, and metabolically active bacteria in shrimp farm effluents of Kino Bay, Sonora, México
resolves10.1007/s00253-007-1106-6
Ammonium removal performance of anaerobic ammonium-oxidizing bacteria immobilized in polyethylene glycol gel carrier
resolves10.1590/S0100-204X2008000900015
Utilização de bactérias ácido-lácticas isoladas do trato intestinal de tilápia-do-nilo como probiótico
resolves10.3354/dao068039
A marine bacterium, Micrococcus MCCB 104, antagonistic to vibrios in prawn larval rearing systems
resolves10.1111/j.1365-2109.2007.01856.x
Determination of microbial community structures of shrimp floc cultures by biomarkers and analysis of floc amino acid profiles
resolves10.3354/meps223073
Nutrient enrichment, habitat variability and trophic transfer efficiency in simple models of pelagic ecosystems
resolves10.1016/j.aquaculture.2011.06.048
Consumption and digestion of suspended microbes by juvenile Pacific white shrimp Litopenaeus vannamei
resolves10.1016/j.aquaculture.2007.10.040
Formation of periphyton biofilm and subsequent biofouling on different substrates in nutrient enriched brackishwater shrimp ponds
resolves10.1111/j.1574-6941.2001.tb00847.x
Distribution and ecophysiology of the nitrifying bacteria emphasizing cultured species
resolves10.1016/S0043-1354(98)00445-X
Effect of temperature on storage polymers and settleability of activated sludge
resolves10.1111/j.1749-7345.2011.00507.x
Superintensive Culture of White Shrimp, <i>Litopenaeus vannamei</i>, in a Biofloc Technology System in Southern Brazil at Different Stocking Densities
resolves10.1007/s10499-010-9357-0
Development of biofilm of Vibrio alginolyticus for oral immunostimulation of shrimp
resolves10.1007/s10750-012-1010-7
Differential utilization of carbon substrates by aggregate-associated and water-associated heterotrophic bacterial communities
resolves10.1080/10454438.2013.788898
Water Quality and Growth of Rohu, <i>Labeo rohita,</i> in a Biofloc System
resolves10.1111/j.1365-2109.2011.02838.x
Effect of low salinity on microbial floc composition and performance of Litopenaeus vannamei (Boone) juveniles reared in a zero-water-exchange super-intensive system
resolves10.1046/j.1365-2109.1998.00246.x
Response of biota to aeration rate in low water exchange ponds farming white shrimp, <i>Penaeus vannamei</i> Boone
resolves10.1046/j.1355-557X.2001.00639.x
Promotion and contribution of biota in low water exchange ponds farming blue shrimp <i>Litopenaeus stylirostris</i> (Stimpson)
resolves10.1100/2012/389623
World Aquaculture: Environmental Impacts and Troubleshooting Alternatives
resolves10.1007/s10499-006-9051-4
Effect of feed and feeding in the culture of salmonids on the marine aquatic environment: a synthesis for European aquaculture
resolves10.1016/0273-1223(96)00611-7
Effects of colloidal stability on clarification and dewatering of activated sludge
resolves10.1111/j.1365-2109.2008.02062.x
Culture of organic tilapia to market size in periphyton-based ponds with reduced feed inputs
resolves10.1016/j.aquaeng.2007.10.003
Performance of an intensive nursery system for the Pacific white shrimp, Litopenaeus vannamei, under limited discharge condition
resolves10.1016/S0044-8486(96)01487-1
The role of microorganisms in aquaculture ponds
resolves10.1111/j.1574-6941.1995.tb00281.x
Anaerobic ammonium oxidation discovered in a denitrifying fluidized bed reactor
resolves10.1016/S0044-8486(96)01433-0
Food ingestion and assimilation by the southern brown shrimp Penaeus subtilis under semi-intensive culture in NE Brazil
resolves10.1016/S0144-8609(03)00011-6
Ex-situ bioremediation of shrimp culture effluent using constructed microbial mats
resolves10.1016/S0044-8486(03)00465-4
Reducing the potential environmental impact of tank aquaculture effluents through intensification and recirculation
resolves10.2307/1296885
The Ocean's Food Web, A Changing Paradigm
resolves10.1007/BF00007363
Energetics of microbial food webs
resolves10.1111/j.1365-2095.2010.00809.x
Effect of promoted natural feed on the production, nutritional, and immunological parameters of Litopenaeus vannamei (Boone, 1931) semi-intensively farmed
resolves10.1007/s10499-012-9534-4
Study of zooplankton communities in shrimp earthen ponds, with and without organic nutrient-enriched substrates
resolves10.1016/S0144-8609(98)00046-6
Comparison of three plant substrates for enhancing carp growth through bacterial biofilm
resolves10.1007/BF02180412
Ammonia distribution and excretion in fish
resolves10.1016/j.aquaculture.2009.11.021
Suspended solids removal to improve shrimp (Litopenaeus vannamei) production and an evaluation of a plant-based feed in minimal-exchange, superintensive culture systems
resolves10.1016/B978-0-08-047514-1.50017-2
NITROGEN TRANSFORMATIONS
resolves10.1016/j.aquaeng.2006.10.004
Use of molasses as carbon source in limited discharge nursery and grow-out systems for Litopenaeus vannamei
resolves10.1016/j.aquaeng.2006.05.002
Kinetics, design and biomass production of a bacteria reactor treating RAS effluent streams
resolves10.1007/s00253-001-0835-1
Ammonia removal from prawn aquaculture water using immobilized nitrifying bacteria
resolves10.1007/s10811-006-9148-1
Removal of nitrogen and phosphorus from wastewater using microalgae immobilized on twin layers: an experimental study
resolves10.4025/actascibiolsci.v31i4.4496
Efeito da adição do melaço na relação carbono/nitrogênio no cultivo de camarão Litopenaeus vannamei na fase berçário
resolves10.1016/S0044-8486(01)00757-8
The effect of feeding frequency on water quality and growth of the black tiger shrimp (Penaeus monodon)
resolves10.5433/1679-0359.2012v33n2p835
Off-flavor por geosmina e 2-Metilisoborneol na aquicultura
resolves10.1016/S0044-8486(03)00476-9
Aquafeeds and the environment: policy implications
resolves10.1016/S0044-8486(02)00372-1
Characterization of the microbial community and nitrogen transformation processes associated with moving bed bioreactors in a closed recirculated mariculture system
resolves10.1016/S0044-8486(98)00511-0
The use of microorganisms as food source for Penaeus paulensis larvae
resolves10.1080/10641269409388560
Toxicity of nitrogenous wastes to aquaculture animals
resolves10.1046/j.1472-765X.2003.01255.x
Control of pathogenic Vibrio spp. by Bacillus subtilis BT23, a possible probiotic treatment for black tiger shrimp Penaeus monodon
resolves10.1023/A:1021365829687
Bacterial community structure and activity in fish farm sediments of the Ligurian sea (Western Mediterranean)
resolves10.1111/j.1365-2109.2011.03087.x
Biofilm feeding by postlarvae of the pink shrimp<i>Farfantepenaeus brasiliensis</i>(Decapoda, Penaidae)
resolves10.1590/S0102-09352010000300019
Effect of probiotic supplemented diet on marine shrimp survival after challenge with Vibrio harveyi
resolves10.1016/j.aquaeng.2009.09.001
Photosynthesis, water respiration and growth performance of Litopenaeus vannamei in a super-intensive raceway culture with zero water exchange: Interaction of water quality variables
resolves10.1016/j.aquaculture.2007.05.035
Effect of probiotics on growth performance and digestive enzyme activity of the shrimp Penaeus vannamei
resolves10.1016/j.aquaculture.2006.04.030
Effect of natural production in a zero exchange suspended microbial floc based super-intensive culture system for white shrimp Litopenaeus vannamei
resolves10.3354/meps058175
Marine epibiosis. I. Fouling and antifouling: some basic aspects
resolves10.1016/S0043-1354(98)00208-5
The effect of dissolved oxygen concentration on the structure, size and size distribution of activated sludge flocs
resolves10.1016/j.watres.2008.07.033
Relationship between floc composition and flocculation and settling properties studied at a full scale activated sludge plant
resolves10.1016/j.aquaculture.2012.05.022
Effects of bioflocs on growth performance, digestive enzyme activity and body composition of juvenile Litopenaeus vannamei in zero-water exchange tanks manipulating C/N ratio in feed
The 25 references without a DOI — listed, not checked
no DOI — not checkedThe Rising Tide, Proceedings of the Special Session on Sustainable Shrimp Farming
no DOI — not checkedBiofloc Technology: A Practical Guide Book
no DOI — not checked1988 ICLARM Manila Philippines Y Avnimelech S Mokady RSV Pullin Protein biosynthesis in circulated fishponds 301 308
no DOI — not checkedCirculated ponds as efficient bioreactors for single cell protein production
no DOI — not checkedEvaluation of autotrophic and heterotrophic microcosm‐based systems on the production response of Litopenaeus vannamei intensively nursed without Artemia and with zero water exchange
no DOI — not checkedMicrobiology in Poecilotherms
no DOI — not checkedAvances en Alimentos y Alimentación en Acuacultura de Peces y Crustáceos
no DOI — not checkedInterrelations between microzooplankton and other plankton organisms
no DOI — not checkedBiofloc Technology – A Practical Guide Book
no DOI — not checkedEffect of diatom supplementation during the nursery rearing of Litopenaeus vannamei (Boone, 1931) in a heterotrophic culture system
no DOI — not checkedEnvironmental Water Advances in Treatment, Remediation and Recycling
no DOI — not checkedMicrobial Approaches to Aquatic Nutrition within Environmentally Sound Aquaculture Production Systems
no DOI — not checkedBiofloc Technology ‐ A Practical Guide Book
no DOI — not checkedLópez‐TarinF(2011)Efecto de la sustitución parcial de una dieta comercial complementada con floc en el crecimiento y la sobrevivencia de camarón blanco Litopenaeus vannamei en un sistema intensivo con cero recambio de agua. M.S. Thesis. CESUES México pp.60.
no DOI — not checkedBudget and discharges of nutrients to the Gulf of California of a semi‐intensive shrimp farm (NW Mexico)
no DOI — not checkedMicrobial Approaches to Aquatic Nutrition Within Environmentally Sound Aquaculture Production Systems
no DOI — not checkedPanjaitanP(2004)Field and laboratory study of Penaeus monodon culture with zero water exchange and limited water exchange model using molasses as a carbon source. Ph.D. Thesis Charles Darwin Univ. Darwin NT Australia.
no DOI — not checkedEstrategias de Alimentación en la Etapa de Engorde del Camarón
no DOI — not checkedThe Rising Tide, Proceedings of the Special Session on Sustainable Shrimp Farming
no DOI — not checkedSamochaTM PatnaikS GandyRL(2004)Heterotrophic intensification of pond shrimp production. Book of Abstracts of Fifth International Conference on Recirculating Aquaculture 22–25 July 2004 Roanoke VA USA.
no DOI — not checkedCurrent Perspectives in Microbial Ecology
no DOI — not checkedMicrobial Ecology of the Oceans
no DOI — not checkedSuitaSM(2009)O uso da Dextrose como fonte de carbono no desenvolvimento de bio‐ flocos e desempenho do camarão‐branco (Litopenaeus vannamei) cultivado em sistema sem renovação de água. Tese de mestrado. Universidade Federal do Rio Grande Rio Grande do Sul Brasil.
no DOI — not checkedBiofloc technology expanding at white shrimp farms
no DOI — not checkedOrganic fertilization un culture ponds
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