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Deep functional analysis of synII, a 770-kilobase synthetic yeast chromosome

https://doi.org/10.1126/science.aaf4791
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53/53 checkable references clean · checked 2026-10-19

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

1 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

The 53 checked references that resolve
resolves10.1093/nar/26.23.5511
Random exploration of the Kluyveromyces lactis genome and comparison with that of Saccharomyces cerevisiae
resolves10.1006/jmbi.2000.4209
Yeast chromosomes have been significantly reshaped during their evolutionary history
resolves10.1038/nature724
The genome sequence of Schizosaccharomyces pombe
resolves10.1186/gb-2003-4-7-r45
Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii
resolves10.1038/nature02424
Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae
resolves10.1038/nbt1128
Combinatorial polyketide biosynthesis by de novo design and rearrangement of modular polyketide synthase genes
resolves10.1038/nature04640
Production of the antimalarial drug precursor artemisinic acid in engineered yeast
resolves10.1126/science.1126439
Emergent Properties of Reduced-Genome <i>Escherichia coli</i>
resolves10.1126/science.1151721
Complete Chemical Synthesis, Assembly, and Cloning of a <i>Mycoplasma genitalium</i> Genome
resolves10.1126/science.1144622
Genome Transplantation in Bacteria: Changing One Species to Another
resolves10.1038/nature10403
Synthetic chromosome arms function in yeast and generate phenotypic diversity by design
resolves10.1002/j.1460-2075.1994.tb06923.x
Complete DNA sequence of yeast chromosome II.
resolves10.1126/science.aaf4557
Design of a synthetic yeast genome
resolves10.1126/science.1249252
Total Synthesis of a Functional Designer Eukaryotic Chromosome
resolves10.1038/nmeth.1318
Enzymatic assembly of DNA molecules up to several hundred kilobases
resolves10.1091/mbc.E07-12-1254
Deletion of Many Yeast Introns Reveals a Minority of Genes that Require Splicing for Function
resolves10.1126/science.aaf4831
Synthesis, debugging, and effects of synthetic chromosome consolidation: synVI and beyond
resolves10.1126/science.aaf4706
Bug mapping and fitness testing of chemically synthesized chromosome X
resolves10.1126/science.aaf4704
“Perfect” designer chromosome V and behavior of a ring derivative
resolves10.1126/science.aaf3981
Engineering the ribosomal DNA in a megabase synthetic chromosome
resolves10.1126/science.aaf4597
3D organization of synthetic and scrambled chromosomes
resolves10.1016/j.molcel.2005.10.036
Rapid tRNA Decay Can Result from Lack of Nonessential Modifications
resolves10.1261/rna.033654.112
The yeast rapid tRNA decay pathway competes with elongation factor 1A for substrate tRNAs and acts on tRNAs lacking one or more of several modifications
resolves10.4014/jmb.0909.09041
Effect of Expression of Genes in the Sphingolipid Synthesis Pathway on the Biosynthesis of Ceramide in Saccharomyces cerevisiae
resolves10.1128/MCB.06111-11
Sphingolipids Regulate the Yeast High-Osmolarity Glycerol Response Pathway
resolves10.1371/journal.pgen.1000629
Establishment of Cohesion at the Pericentromere by the Ctf19 Kinetochore Subcomplex and the Replication Fork-Associated Factor, Csm3
resolves10.1093/gbe/evp034
Fragile Genomic Sites Are Associated with Origins of Replication
resolves10.1371/journal.pgen.1004084
A Comprehensive tRNA Deletion Library Unravels the Genetic Architecture of the tRNA Pool
resolves10.1073/pnas.0811011106
One-step assembly in yeast of 25 overlapping DNA fragments to form a complete synthetic <i>Mycoplasma genitalium</i> genome
resolves10.1101/gr.193433.115
SCRaMbLE generates designed combinatorial stochastic diversity in synthetic chromosomes
resolves10.1016/j.celrep.2015.11.033
Preservation of Gene Duplication Increases the Regulatory Spectrum of Ribosomal Protein Genes and Enhances Growth under Stress
resolves10.1063/1.2818565
Calculating the free energy of self-assembled structures by thermodynamic integration
resolves10.1093/nar/gkm041
USERTM friendly DNA engineering and cloning method by uracil excision
resolves10.1186/1748-7188-6-26
ViennaRNA Package 2.0
resolves10.1093/nar/18.21.6409
Optimization of the annealing temperature for DNA amplification<i>in vitro</i>;
resolves10.1007/BF00330984
A positive selection for mutants lacking orotidine-5′-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance
resolves10.1073/pnas.85.16.6022
Recognition and cleavage site of the intron-encoded omega transposase.
resolves10.1093/nar/24.13.2519
A new efficient gene disruption cassette for repeated use in budding yeast
resolves10.1093/bioinformatics/btp324
Fast and accurate short read alignment with Burrows–Wheeler transform
resolves10.1101/gr.107524.110
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
resolves10.1093/bioinformatics/btp352
The Sequence Alignment/Map format and SAMtools
resolves10.1093/bib/bbs012
Using Tablet for visual exploration of second-generation sequencing data
resolves10.1186/gb-2009-10-3-r25
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
resolves10.1093/nar/25.14.2745
PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing
resolves10.1038/nprot.2007.94
Pulsed-field gel electrophoresis
resolves10.1534/genetics.109.106229
The Mother Enrichment Program: A Genetic System for Facile Replicative Life Span Analysis in <i>Saccharomyces cerevisiae</i>
resolves10.1093/bioinformatics/btp120
TopHat: discovering splice junctions with RNA-Seq
resolves10.1186/gb-2010-11-10-r106
Differential expression analysis for sequence count data
resolves10.1002/pmic.201300361
IQuant: An automated pipeline for quantitative proteomics based upon isobaric tags
resolves10.1038/nprot.2011.319
Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst
resolves10.1111/j.2517-6161.1995.tb02031.x
Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
resolves10.1093/nar/gkr916
YMDB: the Yeast Metabolome Database
resolves10.1093/nar/gkt878
The dynamics of genome replication using deep sequencing
The 1 reference without a DOI — listed, not checked
no DOI — not checkedJ.Dymond, J.Boeke, The Saccharomyces cerevisiae SCRaMbLE system and genome minimization. Bioeng. Bugs 3, 168–171 (2012). 22572789
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