Reference health
Contextual Flexibility in Pseudomonas aeruginosa Central Carbon Metabolism during Growth in Single Carbon Sources
1 of 102 checkable references need attention · checked 2026-07-25
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References needing attention
does not resolve to a known work10.1172/JCI13870
The 101 checked references that resolve
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Convergent Metabolic Specialization through Distinct Evolutionary Paths in Pseudomonas aeruginosa
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Adapting to the Airways: Metabolic Requirements of Pseudomonas aeruginosa during the Infection of Cystic Fibrosis Patients
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Carbon catabolite repression in<i>Pseudomonas</i>: optimizing metabolic versatility and interactions with the environment
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Nutritional Cues Control<i>Pseudomonas aeruginosa</i>Multicellular Behavior in Cystic Fibrosis Sputum
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Evidence and Role for Bacterial Mucin Degradation in Cystic Fibrosis Airway Disease
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Blocking Phosphatidylcholine Utilization in Pseudomonas aeruginosa, via Mutagenesis of Fatty Acid, Glycerol and Choline Degradation Pathways, Confirms the Importance of This Nutrient Source In Vivo
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Influence of nutrient media on the chemical composition of the exopolysaccharide from mucoid and non-mucoid Pseudomonas aeruginosa
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Transcriptomic fingerprinting of
<i>
<scp>P</scp>
seudomonas putida
</i>
under alternative physiological regimes
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The Glycerol-Dependent Metabolic Persistence of Pseudomonas putida KT2440 Reflects the Regulatory Logic of the GlpR Repressor
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Transcriptome analysis of a Pseudomonas aeruginosa sn-glycerol-3-phosphate dehydrogenase mutant reveals a disruption in bioenergetics
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A genome-wide screen in Escherichia coli reveals that ubiquinone is a key antioxidant for metabolism of long-chain fatty acids
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mini-Tn7 insertion in bacteria with single attTn7 sites: example Pseudomonas aeruginosa
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13C-Flux Spectral Analysis of Host-Pathogen Metabolism Reveals a Mixed Diet for Intracellular Mycobacterium tuberculosis
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<sup>13</sup>
C isotopologue perturbation studies of
<i>Listeria monocytogenes</i>
carbon metabolism and its modulation by the virulence regulator PrfA
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Dissecting the genetic and metabolic mechanisms of adaptation to the knockout of a major metabolic enzyme in
<i>Escherichia coli</i>
resolves10.1186/s12918-015-0148-0
Fluxome study of Pseudomonas fluorescens reveals major reorganisation of carbon flux through central metabolic pathways in response to inactivation of the anti-sigma factor MucA
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Proteome and carbon flux analysis of <i>Pseudomonas aeruginosa</i> clinical isolates from different infection sites
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Robustness and Plasticity of Metabolic Pathway Flux among Uropathogenic Isolates of Pseudomonas aeruginosa
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Metabolic flux analyses of Pseudomonas aeruginosa cystic fibrosis isolates
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High-resolution in situ transcriptomics of Pseudomonas aeruginosa unveils genotype independent patho-phenotypes in cystic fibrosis lungs
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GC-MS-based 13C metabolic flux analysis resolves the parallel and cyclic glucose metabolism of Pseudomonas putida KT2440 and Pseudomonas aeruginosa PAO1
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Regulation of glycerol metabolism in Pseudomonas aeruginosa: characterization of the glpR repressor gene
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The effect of nutrient limitation on glycerol uptake and metabolism in continuous cultures of Pseudomonas aeruginosa
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Biochemistry, genetics and biotechnology of glycerol utilization in
<i>Pseudomonas</i>
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The Entner-Doudoroff pathway: history, physiology and molecular biology
resolves10.1074/jbc.M115.687749
Pseudomonas putida KT2440 Strain Metabolizes Glucose through a Cycle Formed by Enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and Pentose Phosphate Pathways
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Relationship between catabolism of glycerol and metabolism of hexosephosphate derivatives by Pseudomonas aeruginosa
resolves10.1111/j.1574-6968.2007.00654.x
Identification of the aceA gene encoding isocitrate lyase required for the growth of Pseudomonas aeruginosa on acetate, acyclic terpenes and leucine
resolves10.1021/acs.biochem.7b00852
Structural and Functional Characterization of Malate Synthase G from Opportunistic Pathogen <i>Pseudomonas aeruginosa</i>
resolves10.1371/journal.pone.0177825
Regulation of acetyl-CoA synthetase transcription by the CrbS/R two-component system is conserved in genetically diverse environmental pathogens
resolves10.1099/00221287-148-12-3839
Malate:quinone oxidoreductase is essential for growth on ethanol or acetate in Pseudomonas aeruginosa The GenBank accession number for the Pseudomonas aeruginosa ATCC 17933 mqo sequence reported in this work is AY129296.
resolves10.1074/jbc.RA118.004514
Gluconeogenic precursor availability regulates flux through the glyoxylate shunt in Pseudomonas aeruginosa
resolves10.1128/JB.00555-07
Oxidative Stress Evokes a Metabolic Adaptation That Favors Increased NADPH Synthesis and Decreased NADH Production in
<i>Pseudomonas fluorescens</i>
resolves10.1128/JB.02176-14
Enzymatic Characterization and
<i>In Vivo</i>
Function of Five Terminal Oxidases in Pseudomonas aeruginosa
resolves10.1128/JB.02273-12
Bacterial Community Morphogenesis Is Intimately Linked to the Intracellular Redox State
resolves10.1016/s0065-2911(00)43005-5
Redundancy of aerobic respiratory chains in bacteria? Routes, reasons and regulation
resolves10.1074/jbc.RA118.003194
Characterization of the Pseudomonas aeruginosa NQR complex, a bacterial proton pump with roles in autopoisoning resistance
resolves10.3389/fmicb.2011.00103
Regulation and Function of Versatile Aerobic and Anaerobic Respiratory Metabolism in Pseudomonas aeruginosa
resolves10.1046/j.1365-2958.2003.03904.x
Differences in two <i>Pseudomonas aeruginosa cbb<sub>3</sub></i> cytochrome oxidases
resolves10.1038/srep19726
Expression of terminal oxidases under nutrient-starved conditions in Shewanella oneidensis: detection of the A-type cytochrome c oxidase
resolves10.1371/journal.pone.0177957
Specific expression and function of the A-type cytochrome c oxidase under starvation conditions in Pseudomonas aeruginosa
resolves10.1111/j.1462-2920.2009.02109.x
Differential expression of multiple terminal oxidases for aerobic respiration in
<i>Pseudomonas aeruginosa</i>
resolves10.1111/1462-2920.13434
Pyridine nucleotide transhydrogenases enable redox balance of
<i>Pseudomonas putida</i>
during biodegradation of aromatic compounds
resolves10.1074/jbc.M311657200
The Soluble and Membrane-bound Transhydrogenases UdhA and PntAB Have Divergent Functions in NADPH Metabolism of Escherichia coli
resolves10.1016/j.bpj.2015.07.002
Cell-Size Homeostasis and the Incremental Rule in a Bacterial Pathogen
resolves10.1016/j.cels.2017.06.005
Why Do Fast-Growing Bacteria Enter Overflow Metabolism? Testing the Membrane Real Estate Hypothesis
resolves10.1128/JB.183.3.1047-1057.2001
Role of Alginate and Its O Acetylation in Formation of
<i>Pseudomonas aeruginosa</i>
Microcolonies and Biofilms
resolves10.3389/fmicb.2014.00554
Physiological levels of nitrate support anoxic growth by denitrification of Pseudomonas aeruginosa at growth rates reported in cystic fibrosis lungs and sputum
resolves10.1128/JB.00162-07
Membrane-Bound Nitrate Reductase Is Required for Anaerobic Growth in Cystic Fibrosis Sputum
resolves10.1099/00221287-147-10-2671
The Pseudomonas aeruginosa acsA gene, encoding an acetyl-CoA synthetase, is essential for growth on ethanol
resolves10.1073/pnas.0607469104
Increasing NADH oxidation reduces overflow metabolism in
<i>Saccharomyces cerevisiae</i>
resolves10.1126/science.1132067
Multiple High-Throughput Analyses Monitor the Response of
<i>E. coli</i>
to Perturbations
resolves10.1002/biot.201200367
Systems metabolic engineering of xylose‐utilizing <i>Corynebacterium glutamicum</i> for production of 1,5‐diaminopentane
resolves10.1111/1462-2920.12438
Adaptation of
<scp>
<i>B</i>
</scp>
<i>acillus subtilis</i>
carbon core metabolism to simultaneous nutrient limitation and osmotic challenge: a multi‐omics perspective
resolves10.1073/pnas.0811091106
Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p
resolves10.1016/j.ymben.2017.10.003
Bio-based succinate from sucrose: High-resolution 13C metabolic flux analysis and metabolic engineering of the rumen bacterium Basfia succiniciproducens
resolves10.1074/jbc.RA119.007885
Multi-omics analysis unravels a segregated metabolic flux network that tunes co-utilization of sugar and aromatic carbons in Pseudomonas putida
resolves10.1128/JB.187.5.1581-1590.2005
Experimental Identification and Quantification of Glucose Metabolism in Seven Bacterial Species
resolves10.1038/s41467-019-08733-w
Phenazine production promotes antibiotic tolerance and metabolic heterogeneity in Pseudomonas aeruginosa biofilms
resolves10.1128/AAC.00987-17
An Antipersister Strategy for Treatment of Chronic Pseudomonas aeruginosa Infections
resolves10.1021/pr4011684
Protein-to-mRNA Ratios Are Conserved between <i>Pseudomonas aeruginosa</i> Strains
resolves10.1111/1462-2920.12224
Metabolic and regulatory rearrangements underlying glycerol metabolism in
<i>
<scp>P</scp>
seudomonas putida
</i>
<scp>KT</scp>
2440
resolves10.1128/mBio.00410-12
Transcriptional Response of Mucoid Pseudomonas aeruginosa to Human Respiratory Mucus
resolves10.1128/mBio.00272-10
RegB Kinase Activity Is Controlled in Part by Monitoring the Ratio of Oxidized to Reduced Ubiquinones in the Ubiquinone Pool
resolves10.1128/JB.00505-07
Pyocyanin Alters Redox Homeostasis and Carbon Flux through Central Metabolic Pathways in
<i>Pseudomonas aeruginosa</i>
PA14
resolves10.1128/JB.00031-18
Phenazines Regulate Nap-Dependent Denitrification in Pseudomonas aeruginosa Biofilms
resolves10.1073/pnas.1805000115
A bet-hedging strategy for denitrifying bacteria curtails their release of N
<sub>2</sub>
O
resolves10.1111/j.1365-2958.2007.05772.x
Responses of <i>Pseudomonas aeruginosa</i> to low oxygen indicate that growth in the cystic fibrosis lung is by aerobic respiration
resolves10.1016/j.bbabio.2012.10.002
Denitrification and aerobic respiration, hybrid electron transport chains and co-evolution
resolves10.1128/IAI.01807-06
In Vivo Evidence of
<i>Pseudomonas aeruginosa</i>
Nutrient Acquisition and Pathogenesis in the Lungs of Cystic Fibrosis Patients
resolves10.1099/mic.0.081158-0
Global regulator Anr represses PlcH phospholipase activity in Pseudomonas aeruginosa when oxygen is limiting
resolves10.1371/journal.pone.0031092
The Pseudomonas aeruginosa Transcriptome in Planktonic Cultures and Static Biofilms Using RNA Sequencing
resolves10.1128/AEM.72.5.3653-3661.2006
Overflow Metabolism in
<i>Escherichia coli</i>
during Steady-State Growth: Transcriptional Regulation and Effect of the Redox Ratio
resolves10.1038/nature15765
Overflow metabolism in Escherichia coli results from efficient proteome allocation
resolves10.1038/35023079
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen
resolves10.1002/9780471729259.mc06e01s25
Growth and Laboratory Maintenance of <i>Pseudomonas aeruginosa</i>
resolves10.1371/journal.pone.0147811
RNASeq Based Transcriptional Profiling of Pseudomonas aeruginosa PA14 after Short- and Long-Term Anoxic Cultivation in Synthetic Cystic Fibrosis Sputum Medium
resolves10.1038/nprot.2012.016
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
resolves10.1021/ac502040v
MultiNotch MS3 Enables Accurate, Sensitive, and Multiplexed Detection of Differential Expression across Cancer Cell Line Proteomes
resolves10.1093/bioinformatics/btr645
MSnbase-an R/Bioconductor package for isobaric tagged mass spectrometry data visualization, processing and quantitation
resolves10.1111/j.2517-6161.1995.tb02031.x
Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
resolves10.1186/1475-2859-6-6
resolves10.1016/j.ymben.2012.07.005
Increased lysine production by flux coupling of the tricarboxylic acid cycle and the lysine biosynthetic pathway—Metabolic engineering of the availability of succinyl-CoA in Corynebacterium glutamicum
resolves10.1099/00221287-133-11-3159
Multiple Enzyme Forms of Glyceraldehyde-3-phosphate Dehydrogenase in Pseudomonas aeruginosa PAO
resolves10.1038/ncomms14631
Reconstruction of the metabolic network of Pseudomonas aeruginosa to interrogate virulence factor synthesis
resolves10.1111/j.1574-6968.1993.tb06012.x
Energy conservation by pyrroloquinoline quinol-linked xylose oxidation in Pseudomonas putida NCTC 10936 during carbon-limited growth in chemostat culture
resolves10.1371/journal.pone.0169437
Pathway-Consensus Approach to Metabolic Network Reconstruction for Pseudomonas putida KT2440 by Systematic Comparison of Published Models
resolves10.1186/1472-6750-13-93
Reconciling in vivo and in silico key biological parameters of Pseudomonas putidaKT2440 during growth on glucose under carbon-limited condition
resolves10.1016/j.btre.2015.08.003
Optimization of single plate-serial dilution spotting (SP-SDS) with sample anchoring as an assured method for bacterial and yeast cfu enumeration and single colony isolation from diverse samples
resolves10.1042/BSR20130043
Maturation of the cytochrome <i>cd</i>1 nitrite reductase NirS from <i>Pseudomonas aeruginosa</i> requires transient interactions between the three proteins NirS, NirN and NirF
resolves10.1016/s0378-1119(98)00130-9
A broad-host-range Flp-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: application for isolation of unmarked Pseudomonas aeruginosa mutants
The 1 reference without a DOI — listed, not checked
no DOI — not checkedHeath Damron F, McKenney ES, Barbier M, Liechti GW, Goldberg JB. 2013. Construction of mobilizable Mini-Tn7 vectors for bioluminescent detection and single copy promoter lux reporter analysis in Gram-negative bacteria. Cambridge University Library, Cambridge, United Kingdom.
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