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Satellite DNA in Plants: More than Just Rubbish
143/143 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
The 143 checked references that resolve
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Contrasting evolution of a satellite DNA and its ancestral IGS rDNA in<i>Phaseolus</i>(Fabaceae)
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Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies
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Evolutionary diversification of satellite DNA sequences from<i>Leymus</i>(Poaceae: Triticeae)
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Diversity of centromeric repeats in two closely related wild rice species, Oryza officinalis and Oryza rhizomatis
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A molecular description of telomeric heterochromatin in secale species
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Isolation and characterization of X chromosome-derived DNA sequences from a dioecious plant Melandrium album
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An ancient satellite DNA has maintained repetitive units of the original structure in most species of the living fossil plant genus<i>Zamia</i>
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Cytogenetic diversity of SSR motifs within and between Hordeum species carrying the H genome: H. vulgare L. and H. bulbosum L.
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The evolutionary history of sea barley (Hordeum marinum) revealed by comparative physical mapping of repetitive DNA
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Survey of repetitive sequences in Silene latifolia with respect to their distribution on sex chromosomes
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Molecular Analysis and Genomic Organization of Major DNA Satellites in Banana (Musa spp.)
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Diversity of a major repetitive DNA sequence in diploid and polyploid Triticeae
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Mapping and organization of highly-repeated DNA sequences by means of simultaneous and sequential FISH and C-banding in 6�-triticale
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Fluorescent in situ hybridization and C-banding analyses of highly repetitive DNA sequences in the heterochromatin of rye (<i>Secale montanum</i> Guss.) and wheat incorporating <i>S</i>. <i>montanum</i> chromosome segments
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Evolutionary Trends of Different Repetitive DNA Sequences During Speciation in the Genus Secale
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The nonrandom distribution of long clusters of all possible classes of trinucleotide repeats in barley chromosomes
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Chromosomal Characterization of the Three Subgenomes in the Polyploids of Hordeum murinum L.: New Insight into the Evolution of This Complex
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The evolution of sex chromosomes in the genus Rumex (Polygonaceae): Identification of a new species with heteromorphic sex chromosomes
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A heterochromatic satellite DNA is highly amplified in a single chromosome of Muscari (Hyacinthaceae)
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Molecular Cytogenetic Characterization of the Dioecious Cannabis sativa with an XY Chromosome Sex Determination System
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Molecular drive in multigene families: How biological novelties arise, spread and are assimilated
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Differential amplification of satellite PaB6 in chromosomally hypervariable Prospero autumnale complex (Hyacinthaceae)
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Nucleotide sequences of HS-α satellite DNA from kangaroo rat dipodomys ordii and characterization of similar sequences in other rodents
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Dicentric Chromosome Formation and Epigenetics of Centromere Formation in Plants
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A Broad Phylogenetic Survey Unveils the Diversity and Evolution of Telomeres in Eukaryotes
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Inactivation of a centromere during the formation of a translocation in maize
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Inheritance and fitness effects of a pericentric inversion and a supernumerary chromosome segment in Muscari comosum (Liliaceae)
resolves10.1139/g98-156
A subtelomeric satellite DNA family isolated from the genome of the dioecious plant <i>Silene latifolia</i>
resolves10.1105/tpc.112.100511
Repeatless and Repeat-Based Centromeres in Potato: Implications for Centromere Evolution
resolves10.1007/s10577-014-9446-4
Chromosome landmarks and autosome-sex chromosome translocations in Rumex hastatulus, a plant with XX/XY1Y2 sex chromosome system
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On the Immortality of Television Sets: "Function" in the Human Genome According to the Evolution-Free Gospel of ENCODE
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Centromere Satellites From <i>Arabidopsis</i> Populations: Maintenance of Conserved and Variable Domains
resolves10.1534/genetics.104.038208
Differential Rates of Local and Global Homogenization in Centromere Satellites From Arabidopsis RelativesSequence data from this article have been deposited with the EMBL/GenBank libraries under accession nos. AY640635, AY640924, AY642784, AY642785, AY642786, AY642787, AY642788, AY642789, AY642790, AY642791, AY642792, AY642793, AY642794, AY642795, AY642796, AY642797, AY642798, AY642799, AY642800, AY642801, AY642802, AY642803, AY642804, AY642805, AY642806, AY656017, AY656018, AY656019, AY656020, AY656021, AY656022, AY656023, AY656024, AY656025, AY656026, AY656027, AY656028, AY656029, and AY792367, AY792498.
resolves10.1007/s10577-012-9332-x
Interstitial telomeric repeats are enriched in the centromeres of chromosomes in Solanum species
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An accumulation of tandem DNA repeats on the Y chromosome in Silene latifolia during early stages of sex chromosome evolution
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Genetic degeneration of old and young Y chromosomes in the flowering plant
<i>Rumex hastatulus</i>
resolves10.1186/1471-2229-10-204
Repetitive part of the banana (Musa acuminata) genome investigated by low-depth 454 sequencing
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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
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Identification and characterization of functional centromeres of the common bean
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HAATI survivors replace canonical telomeres with blocks of generic heterochromatin
resolves10.1007/s004120050098
Characterisation of repeated sequences from microdissected B chromosomes of Crepis capillaris
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Inheritance and fitness effects analysis for a euchromatic supernumerary chromosome segment in Scilla autumnalis (Liliaceae)
resolves10.1139/g05-130
The clustering of four subfamilies of satellite DNA at individual chromosome ends in<i>Silene latifolia</i>
resolves10.1023/A:1009285311247
Exclusive Localization of Tandem Repetitive Sequences in Subtelomeric Heterochromatin Regions of Leymus Racemosus (Poaceae, Triticeae)
resolves10.1111/nph.12289
High‐copy sequences reveal distinct evolution of the rye <scp>B</scp> chromosome
resolves10.1093/nar/14.9.3871
Palindromic sequences are associated with sites of DNA breakage during gene conversion
resolves10.1093/molbev/msl127
Transcription and Evolutionary Dynamics of the Centromeric Satellite Repeat CentO in Rice
resolves10.1111/tpj.12086
Wheat centromeric retrotransposons: the new ones take a major role in centromeric structure
resolves10.1007/s004120000074
Molecular cytogenetic analyses and phylogenetic studies in the Nicotiana section Tomentosae
resolves10.1111/j.1365-313X.2006.02930.x
Comparative genomics and repetitive sequence divergence in the species of diploid<i>Nicotiana</i>section Alatae
resolves10.1007/s00239-002-2427-9
Unisexuality and Molecular Drive: Bag320 Sequence Diversity in Bacillus Taxa (Insecta Phasmatodea)
resolves10.1101/gr.4583106
Retrotransposon accumulation and satellite amplification mediated by segmental duplication facilitate centromere expansion in rice
resolves10.1016/j.tig.2007.01.004
Plant centromere organization: a dynamic structure with conserved functions
resolves10.1007/s004380000245
Two new families of tandem repeats isolated from genus Vicia using genomic self-priming PCR
resolves10.1007/s00412-006-0070-8
Sequence homogenization and chromosomal localization of VicTR-B satellites differ between closely related Vicia species
resolves10.1186/1471-2164-8-427
Repetitive DNA in the pea (Pisum sativum L.) genome: comprehensive characterization using 454 sequencing and comparison to soybean and Medicago truncatula
resolves10.1016/j.gene.2009.06.014
Hypervariable 3′ UTR region of plant LTR-retrotransposons as a source of novel satellite repeats
resolves10.1093/bioinformatics/btq343
Global sequence characterization of rice centromeric satellite based on oligomer frequency analysis in large-scale sequencing data
resolves10.1371/journal.pone.0027335
Next Generation Sequencing-Based Analysis of Repetitive DNA in the Model Dioceous Plant Silene latifolia
resolves10.1139/g05-089
Cloning and characterization of dispersed repetitive DNA derived from microdissected sex chromosomes of<i>Rumex acetosa</i>
resolves10.1007/s00438-008-0405-7
Accumulation of Y-specific satellite DNAs during the evolution of Rumex acetosa sex chromosomes
resolves10.1038/nrc3025
Telomeric and extra-telomeric roles for telomerase and the telomere-binding proteins
resolves10.1073/pnas.1204237109
Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences
resolves10.1016/j.gpb.2014.07.003
Repetitive Sequences in Plant Nuclear DNA: Types, Distribution, Evolution and Function
resolves10.1007/s12010-014-0966-3
Significance of Satellite DNA Revealed by Conservation of a Widespread Repeat DNA Sequence Among Angiosperms
resolves10.1186/gb-2013-14-1-r10
Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution
resolves10.1093/molbev/msl119
Interplay of Selective Pressure and Stochastic Events Directs Evolution of the MEL172 Satellite DNA Library in Root-Knot Nematodes
resolves10.1007/s00239-004-0342-y
Preservation and High Sequence Conservation of Satellite DNAs Suggest Functional Constraints
resolves10.1093/molbev/msi069
Structure, Divergence, and Distribution of the CRR Centromeric Retrotransposon Family in Rice
resolves10.1093/molbev/msi186
The Evolution of Reproductive Systems and Sex-Determining Mechanisms Within Rumex (Polygonaceae) Inferred from Nuclear and Chloroplastidial Sequence Data
resolves10.1007/s00239-004-0199-0
Reduced Rates of Sequence Evolution of Y-Linked Satellite DNA in Rumex (Polygonaceae)
resolves10.1016/j.gene.2005.10.013
The origin and evolution of the variability in a Y-specific satellite-DNA of Rumex acetosa and its relatives
resolves10.1093/bioinformatics/btm005
SatDNA Analyzer: a computing tool for satellite-DNA evolutionary analysis
resolves10.1159/000200091
Characterization of RUSI, a telomere-associated satellite DNA, in the genus <i>Rumex</i> (Polygonaceae)
resolves10.1007/s10709-008-9261-y
Molecular cytogenetic characterization of Rumex papillaris, a dioecious plant with an XX/XY1Y2 sex chromosome system
resolves10.1007/s00438-009-0472-4
Effect of location, organization, and repeat-copy number in satellite-DNA evolution
resolves10.1186/1471-2229-8-90
Survey of extrachromosomal circular DNA derived from plant satellite repeats
resolves10.1186/1759-8753-2-4
Plant centromeric retrotransposons: a structural and cytogenetic perspective
resolves10.1371/journal.pgen.1002777
Stretching the Rules: Monocentric Chromosomes with Multiple Centromere Domains
resolves10.1186/1471-2105-11-378
Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data
resolves10.1093/bioinformatics/btt054
RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads
resolves10.1371/journal.pone.0098918
Genome-Wide Analysis of Repeat Diversity across the Family Musaceae
resolves10.1139/g96-013
Genome and chromosome identification in cultivated barley and related species of the Triticeae (Poaceae) by in situ hybridization with the GAA-satellite sequence
resolves10.1007/s11103-011-9848-z
Concerted evolution of satellite DNA in Sarcocapnos: a matter of time
resolves10.1111/tpj.12839
Characterisation of an unusual telomere motif (<scp>TTTTTTAGGG</scp>)<sub>n</sub> in the plant <i>Cestrum elegans</i> (Solanaceae), a species with a large genome
resolves10.1093/molbev/mss168
Next-Generation Sequencing Reveals the Impact of Repetitive DNA Across Phylogenetically Closely Related Genomes of Orobanchaceae
resolves10.1101/gr.5290206
Doubling genome size without polyploidization: Dynamics of retrotransposition-driven genomic expansions in
<i>Oryza australiensis</i>
, a wild relative of rice
resolves10.1016/j.gene.2007.11.013
Satellite DNAs between selfishness and functionality: Structure, genomics and evolution of tandem repeats in centromeric (hetero)chromatin
resolves10.1038/hdy.2009.141
Long-term conservation vs high sequence divergence: the case of an extraordinarily old satellite DNA in bivalve mollusks
resolves10.1139/g10-115
A satellite DNA evolutionary analysis in the North American endemic dioecious plant<i>Rumex hastatulus</i>(Polygonaceae)
resolves10.1093/aob/mct233
Differential spreading of HinfI satellite DNA variants during radiation in Centaureinae
resolves10.1007/s10265-014-0648-9
Satellite-DNA diversification and the evolution of major lineages in Cardueae (Carduoideae Asteraceae)
resolves10.1093/jhered/esi041
Novel Repeated DNA Sequences in Safflower (Carthamus tinctorius L.) (Asteraceae): Cloning, Sequencing, and Physical Mapping by Fluorescence in situ Hybridization
resolves10.3389/fpls.2013.00109
The Subtelomeric khipu Satellite Repeat from Phaseolus vulgaris: Lessons Learned from the Genome Analysis of the Andean Genotype G19833
resolves10.1038/hdy.1994.28
Cytogenetic and molecular analysis of the multiple sex chromosome system of Rumex acetosa
resolves10.1007/978-94-010-9166-4_7
A model for heterochromatin dispersion and the evolution of C-band patterns
resolves10.1007/s004120050377
Chromosome painting of Y chromosomes and isolation of a Y chromosome-specific repetitive sequence in the dioecious plant Rumex acetosa
resolves10.1023/A:1009252913344
Differentiation and the Polymorphic Nature of the Y Chromosomes Revealed by Repetitive Sequences in the Dioecious Plant, Rumex Acetosa
resolves10.1139/g99-128
Molecular cytogenetic analysis of supernumerary heterochromatic segments in <i>Rumex acetosa</i>
resolves10.1159/000337127
<b><i>Drosophila</i></b> Telomeres: an Example of Co-Evolution with Transposable Elements
resolves10.1093/gbe/evt049
Contrasting Patterns of Transposable Element and Satellite Distribution on Sex Chromosomes (XY1Y2) in the Dioecious Plant Rumex acetosa
resolves10.1016/j.gene.2007.09.001
Satellite-DNA evolutionary patterns under a complex evolutionary scenario: The case of Acrolophus subgroup (Centaurea L., Compositae) from the western Mediterranean
resolves10.1007/s00438-003-0811-9
Characterization of telomere-subtelomere junctions in Silene latifolia
resolves10.3732/ajb.93.6.814
Minisatellite telomeres occur in the family Alliaceae but are lost in <i>Allium</i>
resolves10.1534/g3.111.000125
Organization and Evolution of Subtelomeric Satellite Repeats in the Potato Genome
resolves10.1023/A:1005912822671
Comparative analysis of the nucleosomal structure of rye, wheat and their relatives
resolves10.1007/BF02261779
Molecular diversification of tandemly organized DNA sequences and heterochromatic chromosome regions in some triticeae species
resolves10.1105/tpc.113.110015
Formation of a Functional Maize Centromere after Loss of Centromeric Sequences and Gain of Ectopic Sequences
resolves10.1073/pnas.1112186108
Extensive, clustered parental imprinting of protein-coding and noncoding RNAs in developing maize endosperm
resolves10.1073/pnas.1319548110
The
<i>CentO</i>
satellite confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres
resolves10.1105/tpc.107.057083
Epigenetic Modification of Centromeric Chromatin: Hypomethylation of DNA Sequences in the CENH3-Associated Chromatin in<i>Arabidopsis thaliana</i>and Maize
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