Every reference with a DOI in the deposited reference list resolved to a known
work in Crossref or DataCite at the dated check, and none carried a retraction,
withdrawal, or removal notice.
The 74 checked references that resolve
resolves10.1016/j.syapm.2008.02.003Characterization of the methanogenic Archaea within two-phase biogas reactor systems operated with plant biomass
resolves10.1128/AEM.01423-09Polyphasic Analyses of Methanogenic Archaeal Communities in Agricultural Biogas Plants
resolves10.1016/j.syapm.2014.10.002Microbial communities involved in biogas production from wheat straw as the sole substrate within a two-phase solid-state anaerobic digestion
resolves10.1007/s00253-012-4348-xTemperature increases from 55 to 75 °C in a two-phase biogas reactor result in fundamental alterations within the bacterial and archaeal community structure
resolves10.1111/1751-7915.12263Dynamic variation of the microbial community structure during the long‐time mono‐fermentation of maize and sugar beet silage
resolves10.1007/s00253-015-6627-9Community shifts in a well-operating agricultural biogas plant: how process variations are handled by the microbiome
resolves10.1186/s13068-014-0193-8Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions
resolves10.1186/s13068-015-0309-9Microbial community dynamics in replicate anaerobic digesters exposed sequentially to increasing organic loading rate, acidosis, and process recovery
resolves10.1371/journal.pone.0014519Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing
resolves10.1186/1754-6834-5-41Characterization of a biogas-producing microbial community by short-read next generation DNA sequencing
resolves10.1016/j.syapm.2013.03.006Metagenome and metaproteome analyses of microbial communities in mesophilic biogas-producing anaerobic batch fermentations indicate concerted plant carbohydrate degradation
resolves10.1016/j.biortech.2016.05.081Deeper insight into the structure of the anaerobic digestion microbial community; the biogas microbiome database is expanded with 157 new genomes
resolves10.1186/s13742-015-0073-6Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant
resolves10.1016/j.jbiotec.2016.06.014An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant
resolves10.1186/s13068-016-0441-1Metagenomic analysis and functional characterization of the biogas microbiome using high throughput shotgun sequencing and a novel binning strategy
resolves10.1186/s13068-016-0581-3Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates
resolves10.1016/j.jbiotec.2013.10.013Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp. Mb1 isolated from a production-scale biogas plant
resolves10.1099/ijs.0.059691-0Clostridium bornimense sp. nov., isolated from a mesophilic, two-phase, laboratory-scale biogas reactor
resolves10.1007/s00253-014-5652-4Isolation and differentiation of methanogenic Archaea from mesophilic corn-fed on-farm biogas plants with special emphasis on the genus Methanobacterium
resolves10.1016/j.jbiotec.2017.05.027The completely annotated genome and comparative genomics of the Peptoniphilaceae bacterium str. ING2-D1G, a novel acidogenic bacterium isolated from a mesophilic biogas reactor
resolves10.1016/j.jbiotec.2015.03.006Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant
resolves10.1016/j.jbiotec.2015.07.022Draft genome sequence of Herbinix hemicellulosilytica T3/55T, a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor
resolves10.1016/j.jbiotec.2014.11.010Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor
resolves10.1099/ijsem.0.001210Erratum to Description of Proteiniphilum saccharofermentans sp. nov., Petrimonas mucosa sp. nov. and Fermentimonas caenicola gen. nov., sp. nov., isolated from mesophilic laboratory-scale biogas reactors, and emended description of the genus Proteiniphilum
resolves10.1016/j.jbiotec.2016.05.001Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment
resolves10.1128/genomeA.00609-16Draft Genome Sequence of
<i>Propionispora</i>
sp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor
resolves10.1093/nar/gks1219The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
resolves10.1016/j.jbiotec.2017.02.015Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste
resolves10.1016/j.jbiotec.2015.08.001Complete genome analysis of Clostridium bornimense strain M2/40T: A new acidogenic Clostridium species isolated from a mesophilic two-phase laboratory-scale biogas reactor
resolves10.1016/j.jbiotec.2011.01.010Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid
resolves10.1093/nar/gkg312GenDB--an open source genome annotation system for prokaryote genomes
resolves10.1093/nar/gks479dbCAN: a web resource for automated carbohydrate-active enzyme annotation
resolves10.1186/s13068-016-0565-3Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants
resolves10.1093/nar/gkt1274RefSeq microbial genomes database: new representation and annotation strategy
resolves10.1016/j.jbiotec.2012.01.020Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing
resolves10.1186/1754-6834-6-49Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms
resolves10.1128/CMR.00014-14The Rebirth of Culture in Microbiology through the Example of Culturomics To Study Human Gut Microbiota
resolves10.1111/1462-2920.12173A genomic update on clostridial phylogeny:
<scp>G</scp>
ram‐negative spore formers and other misplaced clostridia
resolves10.1186/s13068-014-0136-4Comparative analysis of the ability of Clostridium clariflavum strains and Clostridium thermocellumto utilize hemicellulose and unpretreated plant material
resolves10.1016/j.jbiotec.2014.08.024Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant
resolves10.1099/ijs.0.000264Herbinix hemicellulosilytica gen. nov., sp. nov., a thermophilic cellulose-degrading bacterium isolated from a thermophilic biogas reactor
resolves10.1099/ijsem.0.001324Herbinix luporum sp. nov., a thermophilic cellulose-degrading bacterium isolated from a thermophilic biogas reactor
resolves10.1099/ijs.0.057109-0Mobilitalea sibirica gen. nov., sp. nov., a halotolerant polysaccharide-degrading bacterium
resolves10.1099/00207713-51-4-1521Proposal of the genera Anaerococcus gen. nov., Peptoniphilus gen. nov. and Gallicola gen. nov. for members of the genus Peptostreptococcus.
resolves10.1099/ijs.0.03054-0Propionispora hippei sp. nov., a novel Gram-negative, spore-forming anaerobe that produces propionic acid
resolves10.1016/j.syapm.2014.05.006Comparative genotyping of Clostridium thermocellum strains isolated from biogas plants: Genetic markers and characterization of cellulolytic potential
resolves10.1016/j.jbiotec.2013.08.011Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation
resolves10.1007/s00253-015-7130-zCharacterization of microbial compositions in a thermophilic chemostat of mixed culture fermentation
resolves10.1002/mbo3.386Analysis of propionate‐degrading consortia from agricultural biogas plants
resolves10.1007/BF01198748Production of 2,3-butanediol from glucose byBacillus licheniformis
resolves10.1271/bbb.60.692NAD-Specific 6-Phosphogluconate Dehydrogenase in Lactic Acid Bacteria
resolves10.1073/pnas.1016761108Coupling of ferredoxin and heterodisulfide reduction via electron bifurcation in hydrogenotrophic methanogenic archaea
resolves10.1186/s40793-016-0199-xComplete genome sequence of Methanoculleus bourgensis strain MAB1, the syntrophic partner of mesophilic acetate-oxidising bacteria (SAOB)
resolves10.1099/ijs.0.003483-0Clostridium clariflavum sp. nov. and Clostridium caenicola sp. nov., moderately thermophilic, cellulose-/cellobiose-digesting bacteria isolated from methanogenic sludge
resolves10.1128/genomeA.00687-16Complete Genome Sequence of
<i>Herbinix luporum</i>
SD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor
resolves10.1016/j.jbiotec.2014.09.017First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant
resolves10.1016/j.jbiotec.2014.11.020Insights into the annotated genome sequence of Methanoculleus bourgensis MS2T, related to dominant methanogens in biogas-producing plants
resolves10.1099/00207713-48-4-1111Methanoculleus palmolei sp. nov., an irregularly coccoid methanogen from an anaerobic digester treating wastewater of a palm oil plant in North-Sumatra, Indonesia
The 8 references without a DOI — listed, not checked
no DOI — not checkedDSMZ medium 287. http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium287.pdf . Accessed 4 May 2016.
no DOI — not checkedDSMZ medium 120. http://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium120.pdf . Accessed 4 May 2016.
no DOI — not checkedSINA alignment service. https://www.arb-silva.de/aligner/ . Accessed 12 Sept 2016.
no DOI — not checkedOllivier BM, Mah RA, Garcia JL, Boone DR. Isolation and characterisation of Methanogenium bourgense sp. nov. Int J Syst Evol Microbiol. 1986;36:297–301.
no DOI — not checkedBryant MP, Boone DR. Isolation and characterization of Methanobacterium formicicum MF. Int J Syst Evol Microbiol. 1987;37:171.
no DOI — not checkedCombet-Blanc Y, Ollivier B, Streicher C, Patel BKC, Dwivedi PP, Pot B, et al. Bacillus thermoamylovorans sp. nov., a moderately thermophilic and amylolytic bacterium. Int J Syst Evol Microbiol. 1995;45:9–16.
no DOI — not checkedLee MJ, Zinder SH. Hydrogen partial pressures in a thermophilic acetate-oxidizing methanogenic coculture. Appl Environ Microbiol. 1998;54:1457–61.
no DOI — not checkedNimura Y, Koh E, Yanadiga F, Suzuki KI, Komagata K, Kozaki M. Amphibacillus xylanus hen. Nov., sp. nov., a facultatively anaerobic sporeforming xylan-digesting bacterium which lacks cytochrome, quinone, and catalase. Int J Syst Evol Microbiol. 1990;40:297–301.
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