Reference health

biogitflow: development workflow protocols for bioinformatics pipelines with git and GitLab

https://doi.org/10.12688/f1000research.24714.3
CiteStamped reference-health badge
13/13 checkable references clean · checked 2026-07-14

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a publisher retraction, withdrawal, or removal notice.

3 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

The 13 checked references that resolve
resolves10.1093/gigascience/giz109
Bionitio: demonstrating and facilitating best practices for bioinformatics command-line software
resolves10.1136/jmedgenet-2019-106152
CCMG practice guideline: laboratory guidelines for next-generation sequencing
resolves10.5281/zenodo.4537153
bioinfo-pf-curie/biogitflow: version-1.1.0
resolves10.1093/gigascience/giy077
Experimenting with reproducibility: a case study of robustness in bioinformatics
resolves10.1038/ejhg.2016.63
Erratum: Guidelines for diagnostic next-generation sequencing
resolves10.1371/journal.pcbi.1000424
A Quick Guide to Organizing Computational Biology Projects
resolves10.1371/journal.pcbi.1004947
Ten Simple Rules for Taking Advantage of Git and GitHub
resolves10.1371/journal.pone.0230557
bertha: Project skeleton for scientific software
resolves10.1016/j.jmoldx.2017.11.003
Standards and Guidelines for Validating Next-Generation Sequencing Bioinformatics Pipelines
resolves10.1371/journal.pcbi.1003285
Ten Simple Rules for Reproducible Computational Research
resolves10.1016/j.ajhg.2018.11.014
Integrating Genomics into Healthcare: A Global Responsibility
resolves10.1007/1-4020-0612-8_229
DEMING CYCLE(PDCA)
resolves10.1016/j.procs.2018.08.191
Version Control System: A Review
The 3 references without a DOI — listed, not checked
no DOI — not checkedA successful git branching model
no DOI — not checkedStandard glossary of terms used in software testing.
no DOI — not checkedConception de logiciels pour le diagnostic clinique par séquençage haut-débit.
What this badge says. CiteStamped means the CHECKABLE references of this work were clean at the dated check: each resolved to a known work in a public registry, and none carried a publisher retraction notice at that time. It says nothing about the quality, findings, or importance of the work itself, and nothing about references deposited without a DOI.

checked 2026-07-14 — re-checked daily as this page is visited; titles and statuses come from Crossref and DataCite and are not part of the signed record

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