Reference health

Geniac: Automatic Configuration GENerator and Installer for nextflow pipelines

https://doi.org/10.12688/openreseurope.13861.2
CiteStamped reference-health badge
19/19 checkable references clean · checked 2026-07-14

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a publisher retraction, withdrawal, or removal notice.

5 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

The 19 checked references that resolve
resolves10.3389/fgene.2014.00199
On best practices in the development of bioinformatics software
resolves10.1038/nbt.3820
Nextflow enables reproducible computational workflows
resolves10.1093/bioinformatics/btw354
MultiQC: summarize analysis results for multiple tools and samples in a single report
resolves10.1038/s41587-020-0439-x
The nf-core framework for community-curated bioinformatics pipelines
resolves10.1093/gigascience/giz109
Bionitio: demonstrating and facilitating best practices for bioinformatics command-line software
resolves10.1162/dint_a_00033
FAIR Computational Workflows
resolves10.1016/j.gpb.2020.01.002
The Birth of Bio-Data Science: Trends, Expectations, and Applications
resolves10.12688/f1000research.15140.2
Recommendations for the packaging and containerizing of bioinformatics software
resolves10.1038/s41592-018-0046-7
Bioconda: sustainable and comprehensive software distribution for the life sciences
resolves10.1371/journal.pcbi.1008622
Using prototyping to choose a bioinformatics workflow management system
resolves10.12688/f1000research.22954.3
QUARTIC: QUick pArallel algoRithms for high-Throughput sequencIng data proCessing
resolves10.12688/f1000research.24714.3
biogitflow: development workflow protocols for bioinformatics pipelines with git and GitLab
resolves10.1371/journal.pone.0177459
Singularity: Scientific containers for mobility of compute
resolves10.1080/21655979.2015.1050162
Engineering bioinformatics: building reliability, performance and productivity into bioinformatics software
resolves10.1093/bib/bbw020
A review of bioinformatic pipeline frameworks
resolves10.1093/gigascience/giaa140
Streamlining data-intensive biology with workflow systems
resolves10.1007/978-1-4939-9074-0_24
Scalable Workflows and Reproducible Data Analysis for Genomics
resolves10.1038/s10038-020-00862-1
Practical guide for managing large-scale human genome data in research
resolves10.1038/sdata.2016.18
The FAIR Guiding Principles for scientific data management and stewardship
The 5 references without a DOI — listed, not checked
no DOI — not checkedbioinfo-pf-curie/geniac: version-2.0.0
no DOI — not checkedbioinfo-pf-curie/geniac-demo: version-2.0.0
no DOI — not checkedbioinfo-pf-curie/geniac-demo-dsl2: version-2.0.0
no DOI — not checkedDocker: Lightweight linux containers for consistent development and deployment.
no DOI — not checkedbioinfo-pf-curie/geniac-template: version-2.0.0
What this badge says. CiteStamped means the CHECKABLE references of this work were clean at the dated check: each resolved to a known work in a public registry, and none carried a publisher retraction notice at that time. It says nothing about the quality, findings, or importance of the work itself, and nothing about references deposited without a DOI.

checked 2026-07-14 — re-checked daily as this page is visited; titles and statuses come from Crossref and DataCite and are not part of the signed record

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