Reference health
Dissecting the Genetic Components of Adaptation of Escherichia coli to the Mouse Gut
47/47 checkable references clean · checked 2026-07-26
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
2 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 47 checked references that resolve
resolves10.1038/nrg1088
Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation
resolves10.1038/ng1867
Unraveling adaptive evolution: how a single point mutation affects the protein coregulation network
resolves10.1534/genetics.106.069906
Adaptive Divergence in Experimental Populations of <i>Pseudomonas fluorescens</i>. III. Mutational Origins of Wrinkly Spreader Diversity
resolves10.1128/JCM.01004-06
Differences between Tissue-Associated Intestinal Microfloras of Patients with Crohn's Disease and Ulcerative Colitis
resolves10.1073/pnas.0407076101
The gut microbiota as an environmental factor that regulates fat storage
resolves10.1016/j.cell.2006.02.017
Ecological and Evolutionary Forces Shaping Microbial Diversity in the Human Intestine
resolves10.1016/j.cell.2006.08.043
Reciprocal Gut Microbiota Transplants from Zebrafish and Mice to Germ-free Recipients Reveal Host Habitat Selection
resolves10.1126/science.1056421
Costs and Benefits of High Mutation Rates: Adaptive Evolution of Bacteria in the Mouse Gut
resolves10.1016/0923-2508(94)90083-3
Signal transduction by the EnvZ-OmpR phosphotransfer system in bacteria
resolves10.1111/j.1365-2958.2007.05988.x
Mutations in two global regulators lower individual mortality in <i>Escherichia coli</i>
resolves10.1128/JB.177.20.5840-5845.1995
Physiological state of Escherichia coli BJ4 growing in the large intestines of streptomycin-treated mice
resolves10.1128/JB.177.16.4696-4702.1995
Modulation of flagellar expression in Escherichia coli by acetyl phosphate and the osmoregulator OmpR
resolves10.1128/JB.180.17.4538-4546.1998
Mutations That Alter the Kinase and Phosphatase Activities of the Two-Component Sensor EnvZ
resolves10.1128/JB.174.5.1522-1527.1992
Molecular analysis of the signaling pathway between EnvZ and OmpR in Escherichia coli
resolves10.1074/jbc.M405410200
In Vitro and ex Vivo Activation of the TLR5 Signaling Pathway in Intestinal Epithelial Cells by a Commensal Escherichia coli Strain
resolves10.1128/JB.180.3.722-731.1998
Curli Fibers Are Highly Conserved between
<i>Salmonella typhimurium</i>
and
<i>Escherichia coli</i>
with Respect to Operon Structure and Regulation
resolves10.1128/JB.180.9.2442-2449.1998
Isolation of an
<i>Escherichia coli</i>
K-12 Mutant Strain Able To Form Biofilms on Inert Surfaces: Involvement of a New
<i>ompR</i>
Allele That Increases Curli Expression
resolves10.1046/j.1365-2958.2002.03170.x
Transcriptome analysis of all two‐component regulatory system mutants of
<i>Escherichia coli</i>
K‐12
resolves10.1016/0022-2836(91)90497-T
EnvZ controls the concentration of phosphorylated OmpR to mediate osmoregulation of the porin genes
resolves10.1128/MMBR.67.4.593-656.2003
Molecular Basis of Bacterial Outer Membrane Permeability Revisited
resolves10.1111/j.1365-2958.2005.04649.x
Maintaining a healthy SPANC balance through regulatory and mutational adaptation
resolves10.1128/IAI.00052-07
Role of Motility and the
<i>flhDC</i>
Operon in
<i>Escherichia coli</i>
MG1655 Colonization of the Mouse Intestine
resolves10.1128/IAI.73.12.8039-8049.2005
Mouse Intestine Selects Nonmotile
<i>flhDC</i>
Mutants of
<i>Escherichia coli</i>
MG1655 with Increased Colonizing Ability and Better Utilization of Carbon Sources
resolves10.1534/genetics.105.052373
Clonal Interference and the Periodic Selection of New Beneficial Mutations in <i>Escherichia coli</i>
resolves10.1097/01.mog.0000194791.59337.28
Flag in the crossroads: flagellin modulates innate and adaptive immunity
resolves10.1073/pnas.0702386104
<i>In vivo</i>
imaging and genetic analysis link bacterial motility and symbiosis in the zebrafish gut
resolves10.1016/S0960-9822(02)00837-0
A Simple Method for Genome-Wide Screening for Advantageous Insertions of Mobile DNAs in Escherichia coli
resolves10.1007/BF02533948
Deconjugation of bile acids by human intestinal bacteria implanted in germ‐free rats
resolves10.1128/JB.186.17.5614-5620.2004
A Regulatory Trade-Off as a Source of Strain Variation in the Species
<i>Escherichia coli</i>
resolves10.1073/pnas.0307195101
The evolution of a pleiotropic fitness tradeoff in
<i>Pseudomonas fluorescens</i>
resolves10.1186/1471-2180-6-86
Construction of a multiple fluorescence labelling system for use in co-invasion studies of Listeria monocytogenes
resolves10.1073/pnas.120163297
One-step inactivation of chromosomal genes in
<i>Escherichia coli</i>
K-12 using PCR products
resolves10.1093/oxfordjournals.jbchem.a132106
Separation and Characterization of the Outer Membrane of Pseudomonas aeruginosa
resolves10.1042/BJ20041125
Structural characterization of <i>Escherichia coli</i> sensor histidine kinase EnvZ: the periplasmic C-terminal core domain is critical for homodimerization
resolves10.1038/11495
The 2 references without a DOI — listed, not checked
no DOI — not checkedDevelopment of the human infant intestinal microbiota.
no DOI — not checkedEvolution at two levels: on genes and form.
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