Reference health
Dynamic interactions within the host-associated microbiota cause tumor formation in the basal metazoan Hydra
48/48 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
41 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 48 checked references that resolve
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Phylostratigraphic tracking of cancer genes suggests a link to the emergence of multicellularity in metazoa
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The Role of CagA in the Gastric Biology of <i>Helicobacter pylori</i>
resolves10.1126/science.aah3648
Patients with familial adenomatous polyposis harbor colonic biofilms containing tumorigenic bacteria
resolves10.1073/pnas.1304960110
Distinct antimicrobial peptide expression determines host species-specific bacterial associations
resolves10.1093/molbev/mss134
Molecular Signatures of the Three Stem Cell Lineages in Hydra and the Emergence of Stem Cell Function at the Base of Multicellularity
resolves10.1073/pnas.0703375104
Long-term maintenance of species-specific bacterial microbiota in the basal metazoan
<i>Hydra</i>
resolves10.1111/j.1462-2920.2009.01963.x
Disturbing epithelial homeostasis in the metazoan
<i>Hydra</i>
leads to drastic changes in associated microbiota
resolves10.4056/sigs.3617113
Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT), and emendation of the species Turneriella parva
resolves10.1016/j.celrep.2017.01.036
Structural Inheritance of the Actin Cytoskeletal Organization Determines the Body Axis in Regenerating Hydra
resolves10.1073/pnas.1008573107
In an early branching metazoan, bacterial colonization of the embryo is controlled by maternal antimicrobial peptides
resolves10.1371/journal.pbio.0060278
A Novel Gene Family Controls Species-Specific Morphological Traits in Hydra
resolves10.1038/s41467-019-11136-6
Temperature and insulin signaling regulate body size in Hydra by the Wnt and TGF-beta pathways
resolves10.1080/21505594.2018.1480830
<i>Pseudomonas aeruginosa</i> flagellum is critical for invasion, cutaneous persistence and induction of inflammatory response of skin epidermis
resolves10.1128/JB.02267-12
Stress-Induced Outer Membrane Vesicle Production by Pseudomonas aeruginosa
resolves10.1038/nrmicro3525
Outer-membrane vesicles from Gram-negative bacteria: biogenesis and functions
resolves10.1126/sciadv.aar7975
The mechanism of two-phase motility in the spirochete
<i>Leptospira</i>
: Swimming and crawling
resolves10.1146/annurev-micro-092611-150055
<i>Pseudomonas aeruginosa</i> Twitching Motility: Type IV Pili in Action
resolves10.1186/s12929-018-0495-4
Pathobiont release from dysbiotic gut microbiota biofilms in intestinal inflammatory diseases: a role for iron?
resolves10.1016/j.femsle.2005.06.044
Actin cytoskeleton disruption by ExoY and its effects on<i>Pseudomonas aeruginosa</i>invasion
resolves10.1111/j.1742-4658.2011.08113.x
Actin as target for modification by bacterial protein toxins
resolves10.1038/nrurol.2015.292
The interplay of extracellular matrix and microbiome in urothelial bladder cancer
resolves10.1258/002367770781036463
Mass culture of hydra: an improved method and its application to other aquatic invertebrates
resolves10.1101/gr.112730.110
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
resolves10.1128/AEM.03006-05
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB
resolves10.1111/j.2517-6161.1995.tb02031.x
Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
resolves10.1186/s13059-014-0550-8
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
resolves10.1099/00207713-50-4-1563
Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence.
resolves10.1093/nar/25.24.4876
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
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Cell type complexity in the basal metazoan Hydra is maintained by both stem cell based mechanisms and transdifferentiation
The 41 references without a DOI — listed, not checked
no DOI — not checkedCancer across the tree of life: Cooperation and cheating in multicellularity
no DOI — not checkedA Symbiotic View of Life: We Have Never Been Individuals
no DOI — not checkedModels of Symbiosis
no DOI — not checkedTranslocation of a gut pathobiont drives autoimmunity in mice and humans
no DOI — not checkedInfection with Helicobacter pylori Strains Possessing cagA Is Associated with an Increased Risk of Developing Adenocarcinoma of the Stomach1
no DOI — not checkedHelicobacter pylori in Health and Disease
no DOI — not checkedWild Mouse Gut Microbiota Promotes Host Fitness and Improves Disease Resistance
no DOI — not checkedStem Cell Transcription Factor FoxO Controls Microbiome Resilience in Hydra
no DOI — not checkedBacteria–bacteria interactions within the microbiota of the ancestral metazoan Hydra contribute to fungal resistance
no DOI — not checkedThe role of the bacterial flagellum in adhesion and virulence
no DOI — not checkedThe role of motility as a virulence factor in bacteria
no DOI — not checkedFlagella and bacterial pathogenicity
no DOI — not checkedHelicobacter pylori infection: An overview of bacterial virulence factors and pathogenesis
no DOI — not checkedType IV pilus structure and bacterial pathogenicity
no DOI — not checkedBacterial adhesion and entry into host cells
no DOI — not checkedBacterial Secretion Systems: An Overview
no DOI — not checkedProtein secretion and the pathogenesis of bacterial infections
no DOI — not checkedSecretion systems in Gram-negative bacteria: Structural and mechanistic insights
no DOI — not checkedThe role of ATP-binding cassette transporters in bacterial pathogenicity
no DOI — not checkedSelective substrate uptake: The role of ATP-binding cassette (ABC) importers in pathogenesis
no DOI — not checkedATP-binding cassette transporters are targets for the development of antibacterial vaccines and therapies
no DOI — not checkedReclassification of Leptospira parva Hovind-Hougen1982 as Turneriella parva gen. nov., comb. nov
no DOI — not checkedLeptospirosis from water sources
no DOI — not checkedCandida albicans and Pseudomonas aeruginosa interact to enhance virulence of mucosal infection in transparent zebrafish
no DOI — not checkedInterspecies competition triggers virulence and mutability in Candida albicans-Pseudomonas aeruginosa mixed biofilms
no DOI — not checkedBacterial toxins modifying the actin cytoskeleton
no DOI — not checkedActin dynamics at sites of extracellular matrix degradation
no DOI — not checkedA view to a kill: The bacterial type VI secretion system
no DOI — not checkedRole of the microbiota in immunity and inflammation
no DOI — not checkedMicrobial colonization is required for normal neurobehavioral development in zebrafish
no DOI — not checkedShifting the balance: Antibiotic effects on host-microbiota mutualism
no DOI — not checkedThe effects of antibiotics on the microbiome throughout development and alternative approaches for therapeutic modulation
no DOI — not checkedLeptospira parva sp.npv.: some morphological and biological characters
no DOI — not checkedKEGG: New perspectives on genomes, pathways, diseases and drugs
no DOI — not checkedVFDB 2016: Hierarchical and refined dataset for big data analysis—10 years on
no DOI — not checkedAntiSMASH: Rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
no DOI — not checkedPHAST: A Fast Phage Search Tool
no DOI — not checkedTeam RC. R: A language and environment for statistical computing. Vienna, Austria; 2013;
no DOI — not checkedNon-senescent Hydra tolerates severe disturbances in the nuclear lamina. Aging (Albany NY)
no DOI — not checkedPreparation techniques for transmission electron microscopy of hydra
no DOI — not checkedsenescent Hydra tolerates severe disturbances in the nuclear lamina
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