Reference health
The complete mitochondrial genome of the pirarucu (Arapaima gigas, Arapaimidae, Osteoglossiformes)
46/46 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
6 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 46 checked references that resolve
resolves10.1016/S0959-437X(98)80035-X
Big trees from little genomes: mitochondrial gene order as a phylogenetic tool
resolves10.1007/s00239-004-0122-8
Complete Mitochondrial Genome Sequences of the South American and the Australian Lungfish: Testing of the Phylogenetic Performance of Mitochondrial Data Sets for Phylogenetic Problems in Tetrapod Relationships
resolves10.1101/gr.156801
The Complete Sequence of the Zebrafish (<i>Danio rerio</i>) Mitochondrial Genome and Evolutionary Patterns in Vertebrate Mitochondrial DNA
resolves10.1016/0022-2836(86)90272-X
Structural conservation and variation in the D-loop-containing region of vertebrate mitochondrial DNA
resolves10.1093/genetics/124.1.157
Length heteroplasmy of sturgeon mitochondrial DNA: an illegitimate elongation model.
resolves10.1016/0968-0004(91)90043-U
Nuclear gadgets in mitochondrial DNA replication and transcription
resolves10.1016/S0169-5347(99)01660-2
Mitogenomics: digging deeper with complete mitochondrial genomes
resolves10.1073/pnas.78.10.6116
Elongation of displacement-loop strands in human and mouse mitochondrial DNA is arrested near specific template sequences.
resolves10.1093/oxfordjournals.molbev.a003730
The Complete Sequence of the Mitochondrial Genome of Buteo buteo (Aves, Accipitridae) Indicates an Early Split in the Phylogeny of Raptors
resolves10.2307/2640823
The Evolution of Diapause in the Killifish Family Rivulidae (Atherinomorpha, Cyprinodontiformes): A Molecular Phylogenetic and Biogeographic Perspective
resolves10.1017/S1367943005002210
Population genetic analysis of Arapaima gigas, one of the largest freshwater fishes of the Amazon basin: implications for its conservation
resolves10.1006/mpev.2001.0970
A Mitogenomic Perspective on the Basal Teleostean Phylogeny: Resolving Higher-Level Relationships with Longer DNA Sequences
resolves10.1016/S1055-7903(02)00331-7
Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the “ancient fish”
resolves10.1093/molbev/msg206
Evolution of the Deep-Sea Gulper Eel Mitochondrial Genomes: Large-Scale Gene Rearrangements Originated Within the Eels
resolves10.1093/bib/5.2.150
MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
resolves10.1007/BF00178868
Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics
resolves10.1093/oxfordjournals.molbev.a025706
Two novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome
resolves10.1007/PL00006190
Evolutionary Shifts in Three Major Structural Features of the Mitochondrial Genome Among Iguanian Lizards
resolves10.1093/oxfordjournals.molbev.a025699
Replication slippage may cause parallel evolution in the secondary structures of mitochondrial transfer RNAs
resolves10.1093/oxfordjournals.molbev.a003741
Mitogenomic Exploration of Higher Teleostean Phylogenies: A Case Study for Moderate-Scale Evolutionary Genomics with 38 Newly Determined Complete Mitochondrial DNA Sequences
resolves10.1007/PL00011798
Organization of the Mitochondrial Genome of a Deep-Sea Fish, Gonostoma gracile (Teleostei: Stomiiformes): First Example of Transfer RNA Gene Rearrangements in Bony Fishes
resolves10.1016/S1055-7903(02)00332-9
Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences
resolves10.1098/rspb.2001.1886
Mitochondrial gene rearrangements confirm the parallel evolution of the crab-like form
resolves10.1080/106351598261030
Amphioxus Mitochondrial DNA, Chordate Phylogeny, and the Limits of Inference Based on Comparisons of Sequences
resolves10.1007/BF02198843
Patterns of nucleotide change in mitochondrial ribosomal RNA genes and the phylogeny of piranhas
resolves10.1590/S1415-47572000000400008
Mitochondrial genome organization and vertebrate phylogenetics
resolves10.1093/oxfordjournals.molbev.a026011
Asymmetrical directional mutation pressure in the mitochondrial genome of mammals
resolves10.1016/S0021-9258(17)39303-1
The complete nucleotide sequence of the Xenopus laevis mitochondrial genome.
resolves10.1007/BF02100199
The main regulatory region of mammalian mitochondrial DNA: Structure-function model and evolutionary pattern
resolves10.1242/jeb.203.4.665
Molecular Systematics of the African Electric Fishes (Mormyroidea: Teleostei) and A Model for the Evolution of Their Electric Organs
resolves10.1093/nar/22.22.4673
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
resolves10.1093/oxfordjournals.molbev.a004066
Secondary Structure of Mitochondrial 12S rRNA Among Fish and Its Phylogenetic Applications
resolves10.1080/10635150290069887
Phylogenetic Placement of Retropinnid Fishes: Data Set Incongruence Can Be Reduced by Using Asymmetric Character State Transformation Costs
resolves10.1016/0092-8674(85)90291-0
In vitro replication of human mitochondrial DNA: Accurate initiation at the origin of light-strand synthesis
resolves10.1186/1471-2164-7-1
Alpha-gliadin genes from the A, B, and D genomes of wheat contain different sets of celiac disease epitopes
resolves10.1093/genetics/142.4.1249
The Complete Nucleotide Sequence of the Mitochondrial Genome of the Lungfish (<i>Protopterus dolloi</i>) Supports Its Phylogenetic Position as a Close Relative of Land Vertebrates
The 6 references without a DOI — listed, not checked
no DOI — not checkedref2
no DOI — not checkedMitochondrial gene rearrangements trace metazoan phylogeny
no DOI — not checkedThe mitochondrial genome of animals
no DOI — not checkedBioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
no DOI — not checkedref33
no DOI — not checkedAmong-site rate variation and phylogenetic analysis of 12S rRNA in sigmodontine rodents
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