Every reference with a DOI in the deposited reference list resolved to a known
work in Crossref or DataCite at the dated check, and none carried a retraction,
withdrawal, or removal notice.
The 90 checked references that resolve
resolves10.1093/emboj/16.20.6250Nuclear translocation and carboxyl‐terminal domain phosphorylation of RNA polymerase II delineate the two phases of zygotic gene activation in mammalian embryos
resolves10.1038/35030148A chemical switch for inhibitor-sensitive alleles of any protein kinase
resolves10.1038/nmeth.2688Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
resolves10.1038/nature22063Cohesin is positioned in mammalian genomes by transcription, CTCF and Wapl
resolves10.1128/mcb.00181-18Heat Shock Causes a Reversible Increase in RNA Polymerase II Occupancy Downstream of mRNA Genes, Consistent with a Global Loss in Transcriptional Termination
resolves10.1186/gb-2013-14-9-r98The non-coding snRNA 7SKcontrols transcriptional termination, poising, and bidirectionality in embryonic stem cells
resolves10.1038/ng.3142Analysis of nascent RNA identifies a unified architecture of initiation regions at mammalian promoters and enhancers
resolves10.1038/nmeth.3329Identification of active transcriptional regulatory elements from GRO-seq data
resolves10.1038/nrg2847Unexpected roles for core promoter recognition factors in cell-type-specific transcription and gene regulation
resolves10.1093/hmg/ddt133Chemical genetic analyses of quantitative changes in Cdk1 activity during the human cell cycle
resolves10.1016/0092-8674(82)90019-8Propagation of globin DNAase i-hypersensitive sites in absence of factors required for induction: A possible mechanism for determination
resolves10.1016/j.cell.2011.03.042A Rapid, Extensive, and Transient Transcriptional Response to Estrogen Signaling in Breast Cancer Cells
resolves10.1006/meth.1996.0412Ligation-Mediated PCR for Chromatin-Structure Analysis of Interphase and Metaphase Chromatin
resolves10.1101/638775Resolving the 3D landscape of transcription-linked mammalian chromatin folding
resolves10.1101/gad.280859.116A hyperactive transcriptional state marks genome reactivation at the mitosis–G1 transition
resolves10.1101/gr.180646.114Genome accessibility is widely preserved and locally modulated during mitosis
resolves10.1101/gr.230300.117Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns
resolves10.7554/elife.02407.025Author response: Genome-wide dynamics of Pol II elongation and its interplay with promoter proximal pausing, chromatin, and exons
resolves10.7554/elife.02407.024Decision letter: Genome-wide dynamics of Pol II elongation and its interplay with promoter proximal pausing, chromatin, and exons
resolves10.1101/gad.335794.119Dynamic regulation of histone modifications and long-range chromosomal interactions during postmitotic transcriptional reactivation
resolves10.1083/jcb.136.1.19Splicing Factors Associate with Hyperphosphorylated RNA Polymerase II in the Absence of Pre-mRNA
resolves10.1006/excr.1996.0373Repression of RNA Polymerase II and III Transcription during M Phase of the Cell Cycle
resolves10.1016/j.molcel.2015.09.021Mitotic Transcriptional Activation: Clearance of Actively Engaged Pol II via Transcriptional Elongation Control in Mitosis
resolves10.1038/nprot.2016.086Base-pair-resolution genome-wide mapping of active RNA polymerases using precision nuclear run-on (PRO-seq)
resolves10.1038/nbt.1630GREAT improves functional interpretation of cis-regulatory regions
resolves10.1038/42282Marking of active genes on mitotic chromosomes
resolves10.1101/gad.308619.117The degree of enhancer or promoter activity is reflected by the levels and directionality of eRNA transcription
resolves10.1101/gad.2005511Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells
resolves10.1101/gr.241547.118CTCF sites display cell cycle–dependent dynamics in factor binding and nucleosome positioning
resolves10.7554/elife.47898CTCF confers local nucleosome resiliency after DNA replication and during mitosis
resolves10.1101/sqb.2017.82.034280Low-Level, Global Transcription during Mitosis and Dynamic Gene Reactivation during Mitotic Exit
resolves10.1128/mcb.17.10.5791Mitotic Repression of RNA Polymerase II Transcription Is Accompanied by Release of Transcription Elongation Complexes
resolves10.1016/j.molcel.2021.02.032H3K27ac bookmarking promotes rapid post-mitotic activation of the pluripotent stem cell program without impacting 3D chromatin reorganization
resolves10.1002/1873-3468.12828Transcription factor retention on mitotic chromosomes: regulatory mechanisms and impact on cell fate decisions
resolves10.1093/nar/gkw257deepTools2: a next generation web server for deep-sequencing data analysis
resolves10.1093/bioinformatics/btp616<tt>edgeR</tt>
: a Bioconductor package for differential expression analysis of digital gene expression data
resolves10.1038/359156a0Loss of gene function through rapid mitotic cycles in the Drosophila embryo
resolves10.1038/ncomms8126Widespread disruption of host transcription termination in HSV-1 infection
resolves10.1101/016642Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions
resolves10.1101/gad.10.19.2389Mitotic regulation of TFIID: inhibition of activator-dependent transcription and changes in subcellular localization.
resolves10.1126/science.1684878Mitotic Phosphorylation of the Oct-1 Homeodomain and Regulation of Oct-1 DNA Binding Activity
resolves10.7554/elife.35621A stable mode of bookmarking by TBP recruits RNA polymerase II to mitotic chromosomes
resolves10.1098/rsob.180011Conserved temporal ordering of promoter activation implicates common mechanisms governing the immediate early response across cell types and stimuli
resolves10.1073/pnas.1711120114Comparative analysis reveals genomic features of stress-induced transcriptional readthrough
resolves10.1242/jcs.103.2.381Cytostellin: A novel, highly conserved protein that undergoes continuous redistribution during the cell cycle
resolves10.1091/mbc.02-02-0030Identification of Genes Periodically Expressed in the Human Cell Cycle and Their Expression in Tumors
resolves10.1089/omi.2011.0118clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
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