Reference health
Genomic Epidemiology of Typhoid Highlights the Need for Lineage Resolution Diagnosis in Treatment Decisions
14/14 checkable references clean · checked 2026-08-23
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
25 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 14 checked references that resolve
resolves10.7189/jogh.01.010401
Typhoid fever and paratyphoid fever: Systematic review to estimate global morbidity and mortality for 2010
resolves10.1371/journal.pntd.0006779
A systematic review of antimicrobial resistance in Salmonella enterica serovar Typhi, the etiological agent of typhoid
resolves10.1128/mBio.00105-18
Emergence of an Extensively Drug-Resistant
<i>Salmonella enterica</i>
Serovar Typhi Clone Harboring a Promiscuous Plasmid Encoding Resistance to Fluoroquinolones and Third-Generation Cephalosporins
resolves10.1128/mBio.02112-18
<i>Salmonella enterica</i>
Serovar Typhi in Bangladesh: Exploration of Genomic Diversity and Antimicrobial Resistance
resolves10.1371/journal.ppat.1008998
Gallbladder carriage generates genetic variation and genome degradation in Salmonella Typhi
resolves10.1089/cmb.2012.0021
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
resolves10.1128/AEM.01746-19
SeqSero2: Rapid and Improved
<i>Salmonella</i>
Serotype Determination Using Whole-Genome Sequencing Data
resolves10.1371/journal.ppat.1002776
Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica
resolves10.1038/ng.3281
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events
resolves10.1128/AAC.02412-14
<i>In Silico</i>
Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing
resolves10.1093/bioinformatics/btu033
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
resolves10.1093/bioinformatics/btl529
Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
The 25 references without a DOI — listed, not checked
no DOI — not checkedTyphoid fever is a systemic infection with the bacterium
no DOI — not checkedThe global burden of typhoid fever
no DOI — not checkedref4
no DOI — not checkedref5
no DOI — not checkedref6
no DOI — not checkedref7
no DOI — not checkedEpidemiology of typhoid and paratyphoid fever in India
no DOI — not checkedref9
no DOI — not checkedref10
no DOI — not checkedAn extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid
no DOI — not checkedPhylogenetic Analysis Indicates a Longer Term Presence of the Globally Distributed H58 Haplotype of Salmonella Typhi in Southern India
no DOI — not checkedref13
no DOI — not checkedref14
no DOI — not checkedPersistent circulation of a fluoroquinolone-resistant Salmonella enterica Typhi clone in the Indian subcontinent
no DOI — not checkedref19
no DOI — not checkedref20
no DOI — not checkedThe phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa
no DOI — not checkedSalmonella Typhi acquires diverse plasmids from other Enterobacteriaceae to develop cephalosporin resistance
no DOI — not checkedref24
no DOI — not checked) to the Kauffmann-White scheme
no DOI — not checkedref27
no DOI — not checkedref28
no DOI — not checkedref29
no DOI — not checkedref30
no DOI — not checkedref37
What this badge says. CiteStamped means the CHECKABLE references of this
work were clean at the dated check: each resolved to a known work in a public registry, and none
carried a retraction notice at that time. It says nothing about the quality, findings,
or importance of the work itself, and nothing about references deposited without a DOI.
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