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Regulation of Stress Correlated Genes and Maintenance of Ionome Homeostasis in Rice Plants in Response to Arsenite Stress: Potential Connection between Transcriptomics and Ionomics

https://doi.org/10.2139/ssrn.4137983
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37/37 checkable references clean · checked 2026-07-23

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

12 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

The 37 checked references that resolve
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Arsenic and Paddy Rice: A Neglected Cancer Risk?
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Arsenic biogeochemical cycling in paddy soil-rice system: Interaction with various factors, amendments and mineral nutrients
resolves10.1016/j.scitotenv.2016.11.108
Human exposure to dietary inorganic arsenic and other arsenic species: State of knowledge, gaps and uncertainties
resolves10.1073/pnas.0802361105
Transporters of arsenite in rice and their role in arsenic accumulation in rice grain
resolves10.1016/j.jes.2021.02.030
Comparative physiological and transcriptomic analyses illuminate common mechanisms by which silicon alleviates cadmium and arsenic toxicity in rice seedlings
resolves10.1016/j.envpol.2016.01.004
The effect of silicon on iron plaque formation and arsenic accumulation in rice genotypes with different radial oxygen loss (ROL)
resolves10.1016/j.chemosphere.2020.127826
Silicon nanoparticle-pulsing mitigates fluoride stress in rice by fine-tuning the ionomic and metabolomic balance and refining agronomic traits
resolves10.1021/acs.est.7b03028
Knocking Out <i>OsPT4</i> Gene Decreases Arsenate Uptake by Rice Plants and Inorganic Arsenic Accumulation in Rice Grains
resolves10.1080/01904167.2015.1016171
Effect of arsenic on concentrations and translocations of mineral elements in the xylem of rice
resolves10.1126/science.1219992
Elemental Profiles Reflect Plant Adaptations to the Environment
resolves10.1073/pnas.0804175105
The leaf ionome as a multivariable system to detect a plant's physiological status
resolves10.1016/j.chemosphere.2018.07.152
Prospects of genetic engineering utilizing potential genes for regulating arsenic accumulation in plants
resolves10.1016/j.envexpbot.2021.104565
Relationship between ionomics and transcriptomics of rice plant in response to arsenite stress
resolves10.1016/j.chemosphere.2020.128160
The response of Pyropia haitanensis to inorganic arsenic under laboratory culture
resolves10.1007/s11356-018-3184-7
Accumulation, translocation, and assessment of heavy metals in the soil-rice systems near a mine-impacted region
resolves10.1002/wics.147
ggplot2
resolves10.1111/j.1365-3040.2011.02299.x
Cadmium retention in rice roots is influenced by cadmium availability, chelation and translocation
resolves10.1016/j.pbi.2009.04.013
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resolves10.1007/s12298-020-00824-z
Physiological responses of rice (Oryza sativa L.) oszip7 loss-of-function plants exposed to varying Zn concentrations
resolves10.1093/jxb/erv040
Should we treat the ionome as a combination of individual elements, or should we be deriving novel combined traits?
resolves10.3389/fmicb.2017.00722
Ecological Stoichiometry beyond Redfield: An Ionomic Perspective on Elemental Homeostasis
resolves10.1111/j.1469-8137.2012.04154.x
Comparative transcriptome analysis of transporters, phytohormone and lipid metabolism pathways in response to arsenic stress in rice (<i>Oryza sativa</i>)
resolves10.1186/s12870-019-1887-7
Transgenerational memory of gene expression changes induced by heavy metal stress in rice (Oryza sativa L.)
resolves10.1186/s12864-017-4108-5
Genome-wide analysis of rice cis-natural antisense transcription under cadmium exposure using strand-specific RNA-Seq
resolves10.1073/pnas.0401572101
Overexpression of a zinc-finger protein gene from rice confers tolerance to cold, dehydration, and salt stress in transgenic tobacco
resolves10.1104/pp.16.01725
The OsMYB30 Transcription Factor Suppresses Cold Tolerance by Interacting with a JAZ Protein and Suppressing <i>β</i>-Amylase Expression
resolves10.1046/j.1365-313X.2003.01938.x
Overexpression of the rice <i>Osmyb4</i> gene increases chilling and freezing tolerance of <i>Arabidopsis thaliana</i> plants
resolves10.1093/jxb/erx174
Maintenance of phosphate homeostasis and root development are coordinately regulated by MYB1, an R2R3-type MYB transcription factor in rice
resolves10.1093/dnares/dsw025
WRKY transcription factor genes in wild rice<i>Oryza nivara</i>
resolves10.3390/agronomy11071301
The Role of OsWRKY Genes in Rice When Faced with Single and Multiple Abiotic Stresses
resolves10.1016/j.chemosphere.2008.09.082
Comparative transcriptome analysis of arsenate and arsenite stresses in rice seedlings
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Arsenic Stress Responses and Tolerance in Rice: Physiological, Cellular and Molecular Approaches
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Genome-Wide Analysis of Potassium Channel Genes in Rice: Expression of the OsAKT and OsKAT Genes under Salt Stress
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Organic acids: versatile stress-response roles in plants
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A Member of the Heavy Metal P-Type ATPase OsHMA5 Is Involved in Xylem Loading of Copper in Rice
The 12 references without a DOI — listed, not checked
no DOI — not checkedIron and Phosphate Deficiency Regulators Concertedly Control Coumarin Profiles in Arabidopsis thaliana Roots During Iron, Phosphate, and Combined Deficiencies
no DOI — not checkedIonomic responses of rice plants to the stresses of different arsenic species in hydroponics
no DOI — not checkedPhysiological responses and transcriptome analyses of upland rice following exposure to arsenite and arsenate
no DOI — not checkedref17
no DOI — not checkedTranscriptome analysis of two contrasting rice cultivars during alkaline stress
no DOI — not checkedInfluence of different arsenic species on uptake, speciation and efflux of arsenic in hydroponic rice plants
no DOI — not checkedModerated estimation of fold change and dispersion for RNA-seq data with DESeq2
no DOI — not checkedArsenic-silicon priming of rice (Oryza sativa L.) seeds influence mineral nutrient uptake and biochemical responses through modulation of Lsi-1, Lsi-2, Lsi-6 and nutrient transporter genes
no DOI — not checkedref33
no DOI — not checkedHeavy Metal Stress-Associated Proteins in Rice and Arabidopsis: Genome-Wide Identification, Phylogenetics, Duplication, and Expression Profiles Analysis
no DOI — not checkedMolecular and Functional Analysis of U-box E3 Ubiquitin Ligase Gene Family in Rice (Oryza sativa)
no DOI — not checkedConstruction of a rice glycoside hydrolase phylogenomic database and identification of targets for biofuel research
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