Reference health
Complex Host/Symbiont Integration of a Multi-Partner Symbiotic System in the Eusocial Aphid Ceratovacuna Japonica
73/73 checkable references clean · checked 2026-07-22
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
33 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
The 73 checked references that resolve
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Symbiotic bacteria enable insect to use a nutritionally inadequate diet
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Coinfection of the secondary symbionts,<i>Hamiltonella defensa</i>and<i>Arsenophonus</i>sp. contribute to the performance of the major aphid pest,<i>Aphis gossypii</i>(Hemiptera: Aphididae)
resolves10.1146/annurev.mi.49.100195.000415
GENETICS, PHYSIOLOGY, AND EVOLUTIONARY RELATIONSHIPS OF THE GENUS <i>BUCHNERA</i>: Intracellular Symbionts of Aphids
resolves10.1038/s41587-019-0209-9
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
resolves10.1093/molbev/msx117
Primates, Lice and Bacteria: Speciation and Genome Evolution in the Symbionts of Hominid Lice
resolves10.1371/journal.pbio.0000021
Developmental Origin and Evolution of Bacteriocytes in the Aphid–Buchnera Symbiosis
resolves10.1093/gbe/evr002
Massive Genomic Decay in Serratia symbiotica, a Recently Evolved Symbiont of Aphids
resolves10.1046/j.1570-7458.2000.00670.x
Fitness effects of two facultative endosymbiotic bacteria on the pea aphid, <i>Acyrthosiphon pisum</i>, and the blue alfalfa aphid, <i>A. kondoi</i>
resolves10.1111/cla.12024
A total‐evidence phylogenetic analysis of<scp>H</scp>ormaphidinae (<scp>H</scp>emiptera:<scp>A</scp>phididae), with comments on the evolution of galls
resolves10.1111/j.1365-2583.2009.00950.x
Characteristics of the genome of
<i>Arsenophonus nasoniae</i>
, son‐killer bacterium of the wasp
<i>Nasonia</i>
resolves10.1093/molbev/msz189
ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models
resolves10.1073/pnas.0900194106
<i>Hamiltonella defensa</i>
, genome evolution of protective bacterial endosymbiont from pathogenic ancestors
resolves10.1111/j.1462-2920.2009.02085.x
Dynamics of genome evolution in facultative symbionts of aphids
resolves10.1186/1741-7007-5-48
Nutritional upgrading for omnivorous carpenter ants by the endosymbiont Blochmannia
resolves10.1016/0022-1910(92)90012-3
Soldier and male of an eusocial aphid Colophina arma lack endosymbiont: Implications for physiological and evolutionary interaction between host and symbiont
resolves10.1093/bioinformatics/btu393
<i>circlize</i>implements and enhances circular visualization in R
resolves10.1007/s00040-012-0258-2
Buying time for colony mates: the anti-predatory function of soldiers in the eusocial aphid Ceratovacuna japonica (Homoptera, Hormaphidinae)
resolves10.1038/ismej.2011.125
Reductive genome evolution, host–symbiont co-speciation and uterine transmission of endosymbiotic bacteria in bat flies
resolves10.1093/molbev/msx148
Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
resolves10.1093/nar/gky1085
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
resolves10.1111/mec.12092
Evolution and diversity of <i><scp>A</scp>rsenophonus</i> endosymbionts in aphids
resolves10.1093/nar/gkf436
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
resolves10.1093/bioinformatics/btz305
RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference
resolves10.1128/AEM.00141-11
New Clues about the Evolutionary History of Metabolic Losses in Bacterial Endosymbionts, Provided by the Genome of Buchnera aphidicola from the Aphid Cinara tujafilina
resolves10.1371/journal.pgen.1002357
Serratia symbiotica from the Aphid Cinara cedri: A Missing Link from Facultative to Obligate Insect Endosymbiont
resolves10.1006/meth.2001.1262
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method
resolves10.1093/gbe/evu133
Settling Down: The Genome of Serratia symbiotica from the Aphid Cinara tujafilina Zooms in on the Process of Accommodation to a Cooperative Intracellular Life
resolves10.1093/gbe/evw085
Reinventing the Wheel and Making It Round Again: Evolutionary Convergence in<i>Buchnera</i>–<i>Serratia</i>Symbiotic Consortia between the Distantly Related Lachninae Aphids<i>Tuberolachnus salignus</i>and<i>Cinara cedri</i>
resolves10.1111/1462-2920.13633
Happens in the best of subfamilies: establishment and repeated replacements of co‐obligate secondary endosymbionts within Lachninae aphids
resolves10.14806/ej.17.1.200
Cutadapt removes adapter sequences from high-throughput sequencing reads
resolves10.1073/pnas.0906424106
Convergent evolution of metabolic roles in bacterial co-symbionts of insects
resolves10.1002/jez.b.3
A comparison of parthenogenetic and sexual embryogenesis of the pea aphid <i>Acyrthosiphon pisum</i> (Hemiptera: Aphidoidea)
resolves10.1016/S0022-1910(98)00104-8
Provision of riboflavin to the host aphid, Acyrthosiphon pisum, by endosymbiotic bacteria, Buchnera
resolves10.1073/pnas.0335320100
Facultative bacterial symbionts in aphids confer resistance to parasitic wasps
resolves10.1146/annurev-ento-112408-085305
Facultative Symbionts in Aphids and the Horizontal Transfer of Ecologically Important Traits
resolves10.1016/j.ympev.2009.12.005
Combination of molecular data support the existence of three main lineages in the phylogeny of aphids (Hemiptera: Aphididae) and the basal position of the subfamily Lachninae
resolves10.1093/nar/gks1219
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
resolves10.1111/j.1758-2229.2010.00177.x
The evolution of animals and plants via symbiosis with microorganisms
resolves10.1098/rspb.2005.3348
Costs and benefits of symbiont infection in aphids: variation among symbionts and across temperatures
resolves10.1007/s00018-011-0645-2
Genomic revelations of a mutualism: the pea aphid and its obligate bacterial symbiont
resolves10.1038/35024074
Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS
resolves10.3390/insects9020058
Camponotus floridanus Ants Incur a Trade-Off between Phenotypic Development and Pathogen Susceptibility from Their Mutualistic Endosymbiont Blochmannia
resolves10.1128/JB.186.19.6626-6633.2004
Coexistence of<i>Wolbachia</i>with<i>Buchnera aphidicola</i>and a Secondary Symbiont in the Aphid<i>Cinara cedri</i>
resolves10.1099/00207713-44-4-846
Taxonomic Note: A Place for DNA-DNA Reassociation and 16S rRNA Sequence Analysis in the Present Species Definition in Bacteriology
resolves10.1093/nar/28.1.33
The COG database: a tool for genome-scale analysis of protein functions and evolution
resolves10.1111/1365-2435.12459
Facultative endosymbionts mediate dietary breadth in a polyphagous herbivore
resolves10.1093/bioinformatics/btp033
Jalview Version 2—a multiple sequence alignment editor and analysis workbench
resolves10.1111/j.1365-2583.2009.00942.x
Genomic insight into the amino acid relations of the pea aphid,
<i>Acyrthosiphon pisum</i>
, with its symbiotic bacterium
<i>Buchnera aphidicola</i>
resolves10.1371/journal.pone.0062145
The Endosymbiont Arsenophonus Is Widespread in Soybean Aphid, Aphis glycines, but Does Not Provide Protection from Parasitoids or a Fungal Pathogen
The 33 references without a DOI — listed, not checked
no DOI — not checkedDNA size marker, positive control and negative control, respectively. Each bacterial symbiont was detected using specific primers targeting a single-copy gene, dnaK. PCR product sizes of DnaK of Buchnera, Arsenophonus, and Hamiltonella are 186, 192, and 117 bp, respectively
no DOI — not checkedref4
no DOI — not checkedref7
no DOI — not checkedtrimAl: A tool for automated alignment trimming in large-scale phylogenetic analyses
no DOI — not checkedPhylogeny of cerataphidini aphids revealed by their symbiotic microorganisms and basic structure of their galls: Implications for host-symbiont coevolution and evolution of sterile soldier castes
no DOI — not checkedHorizontal gene transfer from diverse bacteria to an insect genome enables a tripartite nested mealybug symbiosis
no DOI — not checkedSerial horizontal transfer of vitamin-biosynthetic genes enables the establishment of new nutritional symbionts in aphids' di-symbiotic systems
no DOI — not checkedBuchnera has changed flatmate but the repeated replacement of co-obligate symbionts is not associated with the ecological expansions of their aphid hosts
no DOI — not checkedParallel Evolution in the Integration of a Co-obligate Aphid Symbiosis
no DOI — not checkedBuchnera gen. nov. and Buchnera aphidicola sp. nov., a Taxon Consisting of the Mycetocyte-Associated, Primary Endosymbionts of Aphids
no DOI — not checkedArsenophonus and sodalis symbionts in louse flies: An analogy to the wigglesworthia and sodalis system in tsetse flies
no DOI — not checkedGenome sequence of Candidatus Arsenophonus lipopteni, the exclusive symbiont of a blood sucking fly Lipoptena cervi (Diptera: Hippoboscidae)
no DOI — not checkedref65
no DOI — not checkedGenome reduction and potential metabolic complementation of the dual endosymbionts in the whitefly Bemisia tabaci
no DOI — not checkedTo B or not to B: Comparative genomics suggests Arsenophonusas a source of B vitamins in whiteflies
no DOI — not checkedAphid hologenomics: current status and future challenges
no DOI — not checkedSymbiont Acquisition and Replacement as a Source of Ecological Innovation
no DOI — not checkedref82
no DOI — not checkedGenome sequence of the pea aphid Acyrthosiphon pisum
no DOI — not checkedPilon: An integrated tool for comprehensive microbial variant detection and genome assembly improvement
no DOI — not checkedref92
no DOI — not checkedMetabolic Complementarity and Genomics of the Dual Bacterial Symbiosis of Sharpshooters
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