Reference health

COVID-19 Clinical Severity, T Cell-Mediated Immune Response, and Correlates of Inflammation: Not an Intuitive Guess

https://doi.org/10.2139/ssrn.4156695
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30/30 checkable references clean · checked 2026-07-23

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

16 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

The 30 checked references that resolve
resolves10.1001/jama.2020.2648
Characteristics of and Important Lessons From the Coronavirus Disease 2019 (COVID-19) Outbreak in China
resolves10.1001/jama.2020.6775
Presenting Characteristics, Comorbidities, and Outcomes Among 5700 Patients Hospitalized With COVID-19 in the New York City Area
resolves10.1016/j.clim.2020.108427
COVID-19 pathophysiology: A review
resolves10.1111/jth.14844
Pathological evidence of pulmonary thrombotic phenomena in severe COVID‐19
resolves10.1126/science.abd4585
Autoantibodies against type I IFNs in patients with life-threatening COVID-19
resolves10.1371/journal.ppat.1009804
Identification of immune correlates of fatal outcomes in critically ill COVID-19 patients
resolves10.1126/science.abc6027
Impaired type I interferon activity and inflammatory responses in severe COVID-19 patients
resolves10.1126/science.abd4570
Inborn errors of type I IFN immunity in patients with life-threatening COVID-19
resolves10.1038/s41577-020-0308-3
COVID-19: immunopathology and its implications for therapy
resolves10.1128/JVI.00510-20
Human Leukocyte Antigen Susceptibility Map for Severe Acute Respiratory Syndrome Coronavirus 2
resolves10.1093/bioinformatics/btu170
Trimmomatic: a flexible trimmer for Illumina sequence data
resolves10.1093/bioinformatics/btv033
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct <i>de Bruijn</i> graph
resolves10.1038/nbt.1883
Full-length transcriptome assembly from RNA-Seq data without a reference genome
resolves10.1128/mSphereDirect.00069-18
A Reference Viral Database (RVDB) To Enhance Bioinformatics Analysis of High-Throughput Sequencing for Novel Virus Detection
resolves10.1038/nmeth.1923
Fast gapped-read alignment with Bowtie 2
resolves10.1186/s13059-018-1618-7
An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar
resolves10.1093/bioinformatics/btv566
Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data
resolves10.1016/j.ebiom.2017.08.007
Thalidomide is Associated With Increased T Cell Activation and Inflammation in Antiretroviral-naive HIV-infected Individuals in a Randomised Clinical Trial of Efficacy and Safety
resolves10.18632/oncotarget.23208
Inflammatory responses and inflammation-associated diseases in organs
resolves10.2174/138161206777947470
Inflamm-Aging, Cytokines and Aging: State of the Art, New Hypotheses on the Role of Mitochondria and New Perspectives from Systems Biology
resolves10.1097/00002030-200005260-00006
`Modeling' relationships among HIV-1 replication, immune activation and CD4+ T-cell losses using adjusted correlative analyses
resolves10.1089/aid.2010.0342
HIV-Associated Immune Activation: From Bench to Bedside
resolves10.3390/pathogens10111425
Fitness Cost of Antiretroviral Drug Resistance Mutations on the pol Gene during Analytical Antiretroviral Treatment Interruption among Individuals Experiencing Virological Failure
resolves10.3390/v13020281
Diagnostic SARS-CoV-2 Cycle Threshold Value Predicts Disease Severity, Survival, and Six-Month Sequelae in COVID-19 Symptomatic Patients
resolves10.1007/s10096-020-04150-w
Impact of viral load at admission on the development of respiratory failure in hospitalized patients with SARS-CoV-2 infection
resolves10.1093/cid/ciaa979
Magnitude and Kinetics of Anti–Severe Acute Respiratory Syndrome Coronavirus 2 Antibody Responses and Their Relationship to Disease Severity
resolves10.1172/JCI138759
Kinetics of viral load and antibody response in relation to COVID-19 severity
resolves10.1038/nri1334
T-cell–B-cell cooperation
resolves10.1016/j.clim.2020.108572
Possible role of HLA class-I genotype in SARS-CoV-2 infection and progression: A pilot study in a cohort of Covid-19 Spanish patients
resolves10.1159/000512063
Early Use of Corticosteroid May Prolong SARS-CoV-2 Shedding in Non-Intensive Care Unit Patients with COVID-19 Pneumonia: A Multicenter, Single-Blind, Randomized Control Trial
The 16 references without a DOI — listed, not checked
no DOI — not checkedPrevalence and severity of corona virus disease 2019 (COVID-19): A systematic review and meta-analysis
no DOI — not checkedref3
no DOI — not checkedref6
no DOI — not checkedCellular immune response to COVID-19 and potential immune modulators
no DOI — not checkedIncreased risk of severe clinical course of COVID-19 in carriers of HLA-C* 04: 01
no DOI — not checkedProtective HLA alleles against severe COVID-19: HLA-A* 68 as an ancestral protection allele in Tapachula-Chiapas
no DOI — not checkedUtility of metagenomic next-generation sequencing for characterization of HIV and human pegivirus diversity
no DOI — not checkedNitazoxanide superiority to placebo to treat moderate COVID-19-A Pilot prove of concept randomized double-blind clinical trial
no DOI — not checkedAssignment of epidemiological lineages in an emerging pandemic using the pangolin tool
no DOI — not checkedref27
no DOI — not checkedref28
no DOI — not checkedImmune reconstitution inflammatory syndrome in HIV-infected patients
no DOI — not checkedref33
no DOI — not checkedref42
no DOI — not checkedPeptides, and in Combination With Age and Sex of Armenian Patients Contributes to COVID-19 Severity
no DOI — not checkedDexamethasone in hospitalized patients with Covid-19
What this badge says. CiteStamped means the CHECKABLE references of this work were clean at the dated check: each resolved to a known work in a public registry, and none carried a retraction notice at that time. It says nothing about the quality, findings, or importance of the work itself, and nothing about references deposited without a DOI.

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