Reference health

Comparing the Accuracy and Efficiency of Third Generation Sequencing Technologies, Oxford Nanopore Technologies, and Pacific Biosciences, for DNA Barcode Sequencing Applications

https://doi.org/10.2139/ssrn.4353430
CiteStamped reference-health badge
16/16 checkable references clean · checked 2026-08-23

Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.

9 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.

The 16 checked references that resolve
resolves10.1371/journal.pbio.1000417
Barcoding Life to Conserve Biological Diversity: Beyond the Taxonomic Imperative
resolves10.1098/rspb.2002.2218
Biological identifications through DNA barcodes
resolves10.1002/ece3.6104
Comparison of morphological, DNA barcoding, and metabarcoding characterizations of freshwater nematode communities
resolves10.1080/10635150500354886
The Promise of DNA Barcoding for Taxonomy
resolves10.1186/s12915-021-01141-x
ONTbarcoder and MinION barcodes aid biodiversity discovery and identification by everyone, for everyone
resolves10.1111/1755-0998.12751
Sorting specimen‐rich invertebrate samples with cost‐effective NGS barcodes: Validating a reverse workflow for specimen processing
resolves10.1128/AEM.01368-19
Relative Performance of MinION (Oxford Nanopore Technologies) versus Sequel (Pacific Biosciences) Third-Generation Sequencing Instruments in Identification of Agricultural and Forest Fungal Pathogens
resolves10.1038/s41587-019-0217-9
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
resolves10.1186/1471-2164-13-341
A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers
resolves10.1073/pnas.0406166101
Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly <i>Astraptes fulgerator</i>
resolves10.1038/nbt.3820
Nextflow enables reproducible computational workflows
resolves10.1093/bioinformatics/btu170
Trimmomatic: a flexible trimmer for Illumina sequence data
resolves10.1016/S0022-2836(05)80360-2
Basic local alignment search tool
resolves10.1093/molbev/mst010
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
resolves10.2307/2408542
Distance Methods for Inferring Phylogenies: A Justification
resolves10.1093/bioinformatics/bty633
ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R
The 9 references without a DOI — listed, not checked
no DOI — not checkedFrom writing to reading the encyclopaedia of life
no DOI — not checkedCounting animal species with DNA barcodes: Canadian insects
no DOI — not checkedA Sequel to Sanger: amplicon sequencing that scales
no DOI — not checkedRecovery of the mitochondrial COI barcode region in diverse Hexapoda through tRNA-based primers
no DOI — not checkedBiological nanopore approach for single-molecule protein sequencing
no DOI — not checkedNanopore technology and its applications in gene sequencing
no DOI — not checkedDNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates
no DOI — not checkedOverlapPER: tools for a fast and accurate DNA barcoding analysis and paired-end assembly
no DOI — not checkedref23
What this badge says. CiteStamped means the CHECKABLE references of this work were clean at the dated check: each resolved to a known work in a public registry, and none carried a retraction notice at that time. It says nothing about the quality, findings, or importance of the work itself, and nothing about references deposited without a DOI.

checked 2026-08-23 — re-checked daily as this page is visited; titles and statuses come from Crossref and DataCite and are not part of the signed record

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