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Development of a Custom MALDI-TOF MS Database for Species-Level Identification of Bacterial Isolates Collected From Spacecraft and Associated Surfaces
33/33 checkable references clean · checked 2026-07-23
Every reference with a DOI in the deposited reference list resolved to a known work in Crossref or DataCite at the dated check, and none carried a retraction, withdrawal, or removal notice.
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The 33 checked references that resolve
resolves10.1111/j.1469-0691.2011.03468.x
Identification of Campylobacter species and related organisms by matrix assisted laser desorption ionization–time of flight (MALDI-TOF) mass spectrometry
resolves10.1128/JCM.01463-10
Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry as an Alternative to 16S rRNA Gene Sequencing for Identification of Difficult-To-Identify Bacterial Strains
resolves10.1002/elps.201200074
<scp>S</scp>pectra<scp>B</scp>ank: An open access tool for rapid microbial identification by <scp>MALDI</scp>‐<scp>TOF MS</scp> fingerprinting
resolves10.1128/JCM.44.4.1359-1366.2006
16S rRNA Gene Sequencing versus the API 20 NE System and the VITEK 2 ID-GNB Card for Identification of Nonfermenting Gram-Negative Bacteria in the Clinical Laboratory
resolves10.1371/journal.pone.0088895
Identification of Borrelia Species after Creation of an In-House MALDI-TOF MS Database
resolves10.1016/j.mimet.2012.03.003
Robustness of two MALDI-TOF mass spectrometry systems for bacterial identification
resolves10.1128/AEM.01177-06
Use of 16S rRNA and
<i>rpoB</i>
Genes as Molecular Markers for Microbial Ecology Studies
resolves10.1128/AEM.02418-10
Rapid Screening of Epidemiologically Important Salmonella enterica subsp. enterica Serovars by Whole-Cell Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry
resolves10.1128/AEM.02272-07
Critical Evaluation of Two Primers Commonly Used for Amplification of Bacterial 16S rRNA Genes
resolves10.1016/j.jbiotec.2017.06.1198
25 years of serving the community with ribosomal RNA gene reference databases and tools
resolves10.1128/JCM.01228-07
16S rRNA Gene Sequencing for Bacterial Identification in the Diagnostic Laboratory: Pluses, Perils, and Pitfalls
resolves10.1099/ijs.0.059774-0
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
resolves10.1128/JCM.00157-08
Evaluation of Matrix-Assisted Laser Desorption Ionization-Time-of-Flight Mass Spectrometry in Comparison to 16S rRNA Gene Sequencing for Species Identification of Nonfermenting Bacteria
resolves10.1016/j.mimet.2006.05.009
16S rRNA sequencing in routine bacterial identification: A 30-month experiment
resolves10.1111/j.1574-6941.2007.00360.x
Molecular bacterial community analysis of clean rooms where spacecraft are assembled
resolves10.1038/npjbiofilms.2016.4
A perspective on 16S rRNA operational taxonomic unit clustering using sequence similarity
resolves10.1371/journal.pone.0173408
Characterization of bacterial community associated with phytoplankton bloom in a eutrophic lake in South Norway using 16S rRNA gene amplicon sequence analysis
resolves10.1128/JCM.01963-14
Identification of Clinical Aeromonas Species by
<i>rpoB</i>
and
<i>gyrB</i>
Sequencing and Development of a Multiplex PCR Method for Detection of Aeromonas hydrophila, A. caviae, A. veronii, and A. media
resolves10.1093/nar/gks1219
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
resolves10.3389/fmicb.2016.01359
Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass-Spectrometry (MALDI-TOF MS) Based Microbial Identifications: Challenges and Scopes for Microbial Ecologists
resolves10.1021/ac0008791
Characterization of the Protein Subset Desorbed by MALDI from Whole Bacterial Cells
resolves10.1099/ijs.0.64189-0
Bacillus safensis sp. nov., isolated from spacecraft and assembly-facility surfaces
resolves10.1128/AEM.01541-09
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
resolves10.1086/600885
Ongoing Revolution in Bacteriology: Routine Identification of Bacteria by Matrix‐Assisted Laser Desorption Ionization Time‐of‐Flight Mass Spectrometry
resolves10.1099/00207713-44-4-846
Taxonomic Note: A Place for DNA-DNA Reassociation and 16S rRNA Sequence Analysis in the Present Species Definition in Bacteriology
resolves10.1093/nar/gkw984
Synthetic spike-in standards for high-throughput 16S rRNA gene amplicon sequencing
resolves10.1128/JCM.02071-09
High-Throughput Identification of Bacteria and Yeast by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry in Conventional Medical Microbiology Laboratories
resolves10.1016/j.mimet.2006.01.006
Optimization of MALDI-TOF MS for strain level differentiation of Arthrobacter isolates
resolves10.1099/00207713-49-2-705
Polyphasic taxonomy of the genus Shewanella and description of Shewanella oneidensis sp. nov.
resolves10.1128/AEM.65.4.1483-1490.1999
Cloning and Nucleotide Sequence Analysis of
<i>gyrB</i>
of
<i>Bacillus cereus</i>
,
<i>B. thuringiensis</i>
,
<i>B. mycoides</i>
, and
<i>B. anthracis</i>
and Their Application to the Detection of
<i>B. cereus</i>
in Rice
resolves10.1093/nar/gkt1209
The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks
resolves10.3791/52064
Use of MALDI-TOF Mass Spectrometry and a Custom Database to Characterize Bacteria Indigenous to a Unique Cave Environment (Kartchner Caverns, AZ, USA)
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