Reference health
Complete Chloroplast Genome of Nicotiana otophora and its Comparison with Related Species
1 of 63 checkable references need attention · checked 2026-07-22
At the dated check, the references listed below either did not resolve in Crossref or DataCite, or carried a retraction notice. Each one is shown with the registry record that put it there.
2 without a DOI — not checked. A reference deposited without a DOI is never matched by title or guessed at; it stays outside the checked set, and this line discloses that.
References needing attention
does not resolve to a known work10.3732/ajb.89.6.921.
The 62 checked references that resolve
resolves10.1093/dnares/11.2.93
Complete Nucleotide Sequence of the Sugarcane (Saccharum Officinarum) Chloroplast Genome: A Comparative Analysis of Four Monocot Chloroplast Genomes
resolves10.1016/S0960-9822(01)00675-3
Chloroplast Evolution: Secondary Symbiogenesis and Multiple Losses
resolves10.1093/molbev/msj029
The Chloroplast Genome of Phalaenopsis aphrodite (Orchidaceae): Comparative Analysis of Evolutionary Rate with that of Grasses and Its Phylogenetic Implications
resolves10.3389/Fpls.2015.00447
The complete chloroplast genome sequence of the relict woody plant Metasequoia glyptostroboides Hu et Cheng
resolves10.1371/journal.pone.0035071
Highly Variable Chloroplast Markers for Evaluating Plant Phylogeny at Low Taxonomic Levels and for DNA Barcoding
resolves10.1186/1471-2148-9-130
Complete chloroplast genome sequence of a tree fern Alsophila spinulosa: insights into evolutionary changes in fern chloroplast genomes
resolves10.1007/bf00713050
Characterization of a new family of tobacco highly repetitive DNA, GRS, specific for theNicotiana tomentosiformis genomic component
resolves10.1016/j.gene.2012.07.020
Complete chloroplast genome sequence of Elodea canadensis and comparative analyses with other monocot plastid genomes
resolves10.1073/pnas.0709121104
Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns
resolves10.1093/molbev/mst010
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
resolves10.1093/dnares/11.4.247
Complete Chloroplast Genome Sequences from Korean Ginseng (Panax schinseng Nees) and Comparative Analysis of Sequence Evolution among 17 Vascular Plants
resolves10.1007/BF01731581
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
resolves10.1139/G11-026
Complete chloroplast genome sequence of <i>Magnolia kwangsiensis</i> (Magnoliaceae): implication for DNA barcoding and population genetics
resolves10.1186/1471-2229-9-131
Comparative analysis of the complete sequence of the plastid genome of Parthenium argentatum and identification of DNA barcodes to differentiate Parthenium species and lines
resolves10.1093/bib/bbn017
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
resolves10.1093/nar/29.22.4633
REPuter: the manifold applications of repeat analysis on a genomic scale
resolves10.1093/molbev/msi191
Identifying the Basal Angiosperm Node in Chloroplast Genome Phylogenies: Sampling One's Way Out of the Felsenstein Zone
resolves10.4319/lom.2008.6.412
Isolation of microsatellites from unknown genomes using known genomes as enrichment templates
resolves10.1093/aob/mcm326
The Ups and Downs of Genome Size Evolution in Polyploid Species of Nicotiana (Solanaceae)
resolves10.1093/bioinformatics/btp187
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
resolves10.1007/s00294-007-0161-y
OrganellarGenomeDRAW (OGDRAW): a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes
resolves10.1016/j.tplants.2005.03.007
Chloroplast genome phylogenetics: why we need independent approaches to plant molecular evolution
resolves10.1073/pnas.0708072104
Using plastid genome-scale data to resolve enigmatic relationships among basal angiosperms
resolves10.1073/pnas.0907801107
Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots
resolves10.1007/Pl00006325
Selection on the codon bias of chloroplast and cyanelle genes in different plant and algal lineages
resolves10.1016/S0074-7696(08)62452-3
Tobacco BY-2 Cell Line as the “HeLa” Cell in the Cell Biology of Higher Plants
resolves10.1371/journal.pone.0036869
Complete Chloroplast Genome Sequence of a Major Invasive Species, Crofton Weed (Ageratina adenophora)
resolves10.1111/tpj.13098
Transgenic tobacco plants with improved cyanobacterial Rubisco expression but no extra assembly factors grow at near wild‐type rates if provided with elevated <scp>CO</scp><sub>2</sub>
resolves10.1111/j.1469-8137.2011.04003.x
Nuclear and chloroplast DNA phylogeography reveals vicariance among European populations of the model species for the study of metal tolerance,<i>Arabidopsis halleri</i>(Brassicaceae)
resolves10.1073/pnas.92.17.7759
Polymorphic simple sequence repeat regions in chloroplast genomes: applications to the population genetics of pines.
resolves10.1139/G97-014
Chloroplast DNA variability in wild and cultivated rice (<i>Oryza</i>spp.) revealed by polymorphic chloroplast simple sequence repeats
resolves10.1371/journal.pone.0057607
The Complete Chloroplast Genome Sequence of the Medicinal Plant Salvia miltiorrhiza
resolves10.1186/1471-2164-8-174
Comparative chloroplast genomics: analyses including new sequences from the angiosperms Nuphar advena and Ranunculus macranthus
resolves10.1093/molbev/msr112
Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived Repetitive DNAs
resolves10.1023/A:1006342018991
Structure and expression of the gene family encoding putrescine N-methyltransferase in Nicotiana tabacum: new clues to the evolutionary origin of cultivated tobacco
resolves10.1016/j.cub.2005.06.040
Monophyly of Primary Photosynthetic Eukaryotes: Green Plants, Red Algae, and Glaucophytes
resolves10.1093/nar/gki366
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs
resolves10.1038/ncomms4833
The tobacco genome sequence and its comparison with those of tomato and potato
resolves10.1186/Gb-2013-14-6-R60
Reference genomes and transcriptomes of Nicotiana sylvestris and Nicotiana tomentosiformis
resolves10.1073/pnas.88.5.1820
Comparison of cloned genes provides evidence for intergenomic exchange of DNA in the evolution of a tobacco glucan endo-1,3-beta-glucosidase gene family.
resolves10.1007/s00438-004-1075-8
The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: comparative analysis of mitochondrial genomes in higher plants
resolves10.1093/dnares/dsp025
The Chloroplast Genome Sequence of Mungbean (Vigna radiata) Determined by High-throughput Pyrosequencing: Structural Organization and Phylogenetic Relationships
resolves10.1093/nar/22.22.4673
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
resolves10.3732/Ajb.94.3.302
A comparative analysis of the <i>Lactuca</i> and <i>Helianthus</i> (Asteraceae) plastid genomes: identification of divergent regions and categorization of shared repeats
resolves10.1007/s11105-015-0853-2
Comparative Analysis of Asteraceae Chloroplast Genomes: Structural Organization, RNA Editing and Evolution
resolves10.3109/19401736.2014.1003890
The completed eight chloroplast genomes of tomato from
<i>Solanum</i>
genus
resolves10.3109/19401736.2014.982602
The whole chloroplast genome of shrub willows (
<i>Salix suchowensis</i>
)
resolves10.1371/journal.pone.0118019
Are Differences in Genomic Data Sets due to True Biological Variants or Errors in Genome Assembly: An Example from Two Chloroplast Genomes
resolves10.1371/journal.pone.0012762
The Complete Chloroplast Genome Sequence of Date Palm (Phoenix dactylifera L.)
resolves10.1093/gbe/evt042
The Complete Chloroplast Genome Sequence of Cephalotaxus oliveri (Cephalotaxaceae): Evolutionary Comparison of Cephalotaxus Chloroplast DNAs and Insights into the Loss of Inverted Repeat Copies in Gymnosperms
resolves10.1007/s00438-005-0092-6
The chloroplast genome of Nicotiana
sylvestris and Nicotiana
tomentosiformis: complete sequencing confirms that the Nicotiana
sylvestris progenitor is the maternal genome donor of Nicotiana
tabacum
resolves10.1021/pr101140n
Dynamic Metabonomic Responses of Tobacco<i>(Nicotiana tabacum)</i>Plants to Salt Stress
The 2 references without a DOI — listed, not checked
no DOI — not checkedThe chloroplast genome
no DOI — not checkedComparative structural organization of plant chloroplast and mitochondrial genomes
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