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The development of permafrost bacterial communities under submarine conditions

https://doi.org/10.1002/2017jg003859

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Methane oxidation following submarine permafrost degradation: Measurements from a central Laptev Sea shelf borehole

inferredcites →https://doi.org/10.1002/2016gl068977openalex-snapshot

Methane fluxes from the sea to the atmosphere across the Siberian shelf seas

inferredcites →https://doi.org/10.1002/grl.50735openalex-snapshot

Offshore permafrost decay and massive seabed methane escape in water depths >20 m at the South Kara Sea shelf

inferredcites →https://doi.org/10.1002/ppp.387openalex-snapshot

Results of permafrost modelling of the lowlands and shelf of the Laptev Sea Region, Russia

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Sub-sea Permafrost

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Multiplicity of Ribosomal RNA Operons in Prokaryotic Genomes

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Bacteria in Permafrost

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The Family Geodermatophilaceae

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The Family Hyphomicrobiaceae

inferredcites →https://doi.org/10.1007/s00367-004-0198-6openalex-snapshot

Offshore permafrost and gas hydrate stability zone on the shelf of East Siberian Seas

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The Arctic Coastal Dynamics Database: A New Classification Scheme and Statistics on Arctic Permafrost Coastlines

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Long-term persistence of bacterial DNA

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An improved fluorescence in situ hybridization protocol for the identification of bacteria and archaea in marine sediments

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Seasonal variations in Arctic sediment dynamics—evidence from 1-year records in the Laptev Sea (Siberian Arctic)

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Microbial diversity in deep-sea sediments from the Menez Gwen hydrothermal vent system of the Mid-Atlantic Ridge

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A procedure for separate recovery of extra- and intracellular DNA from a single marine sediment sample

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Late Quaternary ice sheet history of northern Eurasia

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Effects of irrigation-induced salinity and sodicity on soil microbial activity

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Osmoadaptation in Bacteria

inferredcites →https://doi.org/10.1029/2007eo130001openalex-snapshot

Nearshore arctic subsea permafrost in transition

inferredcites →https://doi.org/10.1029/2007jb004946openalex-snapshot

Non‐contact infrared temperature measurements in dry permafrost boreholes

inferredcites →https://doi.org/10.1029/2008gl036205openalex-snapshot

Increase in the rate and uniformity of coastline erosion in Arctic Alaska

inferredcites →https://doi.org/10.1029/2011gb004238openalex-snapshot

Response of methanogenic archaea to Late Pleistocene and Holocene climate changes in the Siberian Arctic

inferredcites →https://doi.org/10.1029/2012jf002358openalex-snapshot

Modeling sub‐sea permafrost in the East Siberian Arctic Shelf: The Laptev Sea region

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Microbes in thawing permafrost: the unknown variable in the climate change equation

inferredcites →https://doi.org/10.1038/ismej.2011.41openalex-snapshot

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea

inferredcites →https://doi.org/10.1038/ismej.2012.93openalex-snapshot

Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient

inferredcites →https://doi.org/10.1038/ismej.2015.97openalex-snapshot

Phylogeny and physiology of candidate phylum ‘Atribacteria’ (OP9/JS1) inferred from cultivation-independent genomics

inferredcites →https://doi.org/10.1038/nature08031openalex-snapshot

The effect of permafrost thaw on old carbon release and net carbon exchange from tundra

inferredcites →https://doi.org/10.1038/nature10576openalex-snapshot

Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw

inferredcites →https://doi.org/10.1038/nature12352openalex-snapshot

Insights into the phylogeny and coding potential of microbial dark matter

inferredcites →https://doi.org/10.1038/nature14338openalex-snapshot

Climate change and the permafrost carbon feedback

inferredcites →https://doi.org/10.1038/nclimate3188openalex-snapshot

Collapsing Arctic coastlines

inferredcites →https://doi.org/10.1038/ngeo2007openalex-snapshot

Ebullition and storm-induced methane release from the East Siberian Arctic Shelf

inferredcites →https://doi.org/10.1038/nmeth.f.303openalex-snapshot

QIIME allows analysis of high-throughput community sequencing data

inferredcites →https://doi.org/10.1038/nrmicro2676-c1openalex-snapshot

Sputnik and Mavirus: more than just satellite viruses

inferredcites →https://doi.org/10.1038/nrmicro2795openalex-snapshot

Beyond biogeographic patterns: processes shaping the microbial landscape

inferredcites →https://doi.org/10.1073/pnas.0801925105openalex-snapshot

Resistance, resilience, and redundancy in microbial communities

inferredcites →https://doi.org/10.1073/pnas.1203849109openalex-snapshot

Global distribution of microbial abundance and biomass in subseafloor sediment

inferredcites →https://doi.org/10.1080/10889370802175895openalex-snapshot

Statistics and characteristics of permafrost and ground-ice distribution in the Northern Hemisphere

inferredcites →https://doi.org/10.1080/10889379909377670openalex-snapshot

Statistics and characteristics of permafrost and ground‐ice distribution in the Northern Hemisphere

inferredcites →https://doi.org/10.1093/bioinformatics/btt593openalex-snapshot

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

inferredcites →https://doi.org/10.1093/bioinformatics/btu170openalex-snapshot

Trimmomatic: a flexible trimmer for Illumina sequence data

inferredcites →https://doi.org/10.1099/ijs.0.062851-0openalex-snapshot

Nocardioides nanhaiensis sp. nov., an actinobacterium isolated from a marine sediment sample

inferredcites →https://doi.org/10.1099/ijs.0.63192-0openalex-snapshot

Nocardioides aestuarii sp. nov., isolated from tidal flat sediment

inferredcites →https://doi.org/10.1099/ijs.0.64442-0openalex-snapshot

Aeromicrobium tamlense sp. nov., isolated from dried seaweed

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Methanogenic activity and biomass in Holocene permafrost deposits of the Lena Delta, Siberian Arctic and its implication for the global methane budget

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Molecular investigations into a globally important carbon pool: permafrost‐protected carbon in Alaskan soils

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A new method for non‐parametric multivariate analysis of variance

inferredcites →https://doi.org/10.1111/j.1462-2920.2008.01836.xopenalex-snapshot

Methanogenic community composition and anaerobic carbon turnover in submarine permafrost sediments of the Siberian Laptev Sea

inferredcites →https://doi.org/10.1111/j.1502-3885.2011.00203.xopenalex-snapshot

Coastal permafrost landscape development since the Late Pleistocene in the western Laptev Sea, Siberia

inferredcites →https://doi.org/10.1111/j.1574-6941.2006.00247.xopenalex-snapshot

Characterization of the microbial diversity in a permafrost sample from the Canadian high Arctic using culture-dependent and culture-independent methods

inferredcites →https://doi.org/10.1111/j.1574-6941.2008.00566.xopenalex-snapshot

Prokaryotic biodiversity and activity in the deep subseafloor biosphere

inferredcites →https://doi.org/10.1111/j.1751-8369.2008.00067.xopenalex-snapshot

Periglacial landscape evolution and environmental changes of Arctic lowland areas for the last 60 000 years (western Laptev Sea coast, Cape Mamontov Klyk)

inferredcites →https://doi.org/10.1111/j.1758-2229.2011.00257.xopenalex-snapshot

Local and regional factors influencing bacterial community assembly

inferredcites →https://doi.org/10.1111/jbi.14281openalex-snapshot

The detection of disease clustering and a generalized regression approach.

inferredcites →https://doi.org/10.1126/science.1182221openalex-snapshot

Extensive Methane Venting to the Atmosphere from Sediments of the East Siberian Arctic Shelf

inferredcites →https://doi.org/10.1126/science.1229223openalex-snapshot

Probing Allostery Through DNA

inferredcites →https://doi.org/10.1126/science.300.5618.407aopenalex-snapshot

Ancient DNA Pulled From Soil

inferredcites →https://doi.org/10.1128/aem.01821-12openalex-snapshot

Comparison of the Levels of Bacterial Diversity in Freshwater, Intertidal Wetland, and Marine Sediments by Using Millions of Illumina Tags

inferredcites →https://doi.org/10.1128/aem.59.3.695-700.1993openalex-snapshot

Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA

inferredcites →https://doi.org/10.1128/aem.62.2.316-322.1996openalex-snapshot

DNA recovery from soils of diverse composition

inferredcites →https://doi.org/10.1128/aem.64.7.2691-2696.1998openalex-snapshot

Microbial Community Composition of Wadden Sea Sediments as Revealed by Fluorescence In Situ Hybridization

inferredcites →https://doi.org/10.1128/aem.66.8.3230-3233.2000openalex-snapshot

Metabolic Activity of Permafrost Bacteria below the Freezing Point

inferredcites →https://doi.org/10.1128/aem.71.1.46-50.2005openalex-snapshot

Simultaneous Recovery of Extracellular and Intracellular DNA Suitable for Molecular Studies from Marine Sediments

inferredcites →https://doi.org/10.1128/mbio.00182-15openalex-snapshot

Transcriptomic Analysis of Vulvovaginal Candidiasis Identifies a Role for the NLRP3 Inflammasome

inferredcites →https://doi.org/10.1128/mbio.02083-14openalex-snapshot

Genomes of PlanktonicAcidimicrobiales: Widening Horizons for MarineActinobacteriaby Metagenomics

inferredcites →https://doi.org/10.1130/g37933.1openalex-snapshot

Fossil DNA persistence and decay in marine sediment over hundred-thousand-year to million-year time scales

inferredcites →https://doi.org/10.1134/s1028334x16030211openalex-snapshot

Ionic composition of pore water in shallow shelf deposits of the Laptev Sea

inferredcites →https://doi.org/10.14806/ej.17.1.200openalex-snapshot

Cutadapt removes adapter sequences from high-throughput sequencing reads

inferredcites →https://doi.org/10.1515/9783110300130openalex-snapshot

Microbial Life of the Deep Biosphere

inferredcites →https://doi.org/10.2312/bzpm_0664_2013openalex-snapshot

Russian-German cooperation SYSTEM LAPTEV SEA : the Expeditions Laptev Sea - Mamontov Klyk 2011 & Buor Khaya 2012

inferredcites →https://doi.org/10.2436/20.1501.01.60openalex-snapshot

Bacterial diversity and community structure in polygonal tundra soils from Samoylov Island, Lena Delta, Siberia.

inferredcites →https://doi.org/10.3133/ofr20131078openalex-snapshot

Distribution of late Pleistocene ice-rich syngenetic permafrost of the Yedoma Suite in east and central Siberia, Russia

inferredcites →https://doi.org/10.3389/fmicb.2015.00192openalex-snapshot

Bacterial community structure across environmental gradients in permafrost thaw ponds: methanotroph-rich ecosystems

inferredcites →https://doi.org/10.3389/fmicb.2015.00393openalex-snapshot

Growth of Rhodococcus sp. strain BCP1 on gaseous n-alkanes: new metabolic insights and transcriptional analysis of two soluble di-iron monooxygenase genes

inferredcites →https://doi.org/10.4319/lom.2008.6.236openalex-snapshot

New cell extraction procedure applied to deep subsurface sediments

inferredcites →https://doi.org/10.5194/bg-14-1261-2017openalex-snapshot

Yedoma Ice Complex of the Buor Khaya Peninsula (southern Laptev Sea)

inferredcites →https://doi.org/10.5194/bg-8-2581-2011openalex-snapshot

Seasonal and interannual variability of sedimentation and organic matter distribution in the Buor-Khaya Gulf: the primary recipient of input from Lena River and coastal erosion in the southeast Laptev Sea

inferredcites →https://doi.org/10.5194/tc-10-1449-2016openalex-snapshot

Coastal dynamics and submarine permafrost in shallow water of the central Laptev Sea, East Siberia

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4747061openalex-extracted

The Biodiversity Hypothesis of Immune-Mediated Diseases Revisited: Microbial Communities on Dry Natural Rocks are Richer and Less Stressed than Those on Man-Made Playgrounds

inferred← citeshttps://doi.org/10.1002/ppp.2061openalex-snapshot

Recent advances in the study of Arctic submarine permafrost

inferred← citeshttps://doi.org/10.1002/ppp.70011openalex-snapshot

Effect of Sea Water Inundation on CO2 and CH4 Production of Thawing Coastal Permafrost Near Utqiaġvik, Alaska

inferred← citeshttps://doi.org/10.1007/s00253-019-09631-3openalex-snapshot

Microbial ecology of the cryosphere (glacial and permafrost habitats): current knowledge

inferred← citeshttps://doi.org/10.1038/s41467-022-32696-0openalex-snapshot

Organic matter composition and greenhouse gas production of thawing subsea permafrost in the Laptev Sea

inferred← citeshttps://doi.org/10.1038/s41598-018-19505-9openalex-snapshot

Anaerobic methanotrophic communities thrive in deep submarine permafrost

inferred← citeshttps://doi.org/10.1088/2515-7620/ab1042openalex-snapshot

First evidence for cold-adapted anaerobic oxidation of methane in deep sediments of thermokarst lakes

inferred← citeshttps://doi.org/10.1089/ast.2018.1877openalex-snapshot

Response of Methanogenic Archaea from Siberian Permafrost and Non-permafrost Environments to Simulated Mars-like Desiccation and the Presence of Perchlorate

inferred← citeshttps://doi.org/10.1093/femsec/fiy110openalex-snapshot

Dispersal limitation and thermodynamic constraints govern spatial structure of permafrost microbial communities

inferred← citeshttps://doi.org/10.1128/aem.00972-21openalex-snapshot

Eight Metagenome-Assembled Genomes Provide Evidence for Microbial Adaptation in 20,000- to 1,000,000-Year-Old Siberian Permafrost

inferred← citeshttps://doi.org/10.1128/spectrum.01930-24openalex-snapshot

Microbial communities on dry natural rocks are richer and less stressed than those on man-made playgrounds

inferred← citeshttps://doi.org/10.1134/s000143382108003xopenalex-snapshot

Bacterial Communities of Frozen Quaternary Sediments of Marine Origin on the Coast of Western Spitsbergen

inferred← citeshttps://doi.org/10.1594/pangaea.873834openalex-snapshot

Pore water chemistry and sediment temperature of sediment core BK-2

inferred← citeshttps://doi.org/10.1594/pangaea.873835openalex-snapshot

Pore water chemistry and sediment temperature of sediment core COAST_C-2

inferred← citeshttps://doi.org/10.3389/feart.2021.637899openalex-snapshot

Thermokarst Lagoons: A Core-Based Assessment of Depositional Characteristics and an Estimate of Carbon Pools on the Bykovsky Peninsula

inferred← citeshttps://doi.org/10.3389/fmicb.2018.02082openalex-snapshot

Desiccation- and Saline-Tolerant Bacteria and Archaea in Kalahari Pan Sediments

inferred← citeshttps://doi.org/10.3389/fmicb.2021.657072openalex-snapshot

Diversity and Distribution of Uncultured and Cultured Gaiellales and Rubrobacterales in South China Sea Sediments

inferred← citeshttps://doi.org/10.3390/cryst12030312openalex-snapshot

Life from a Snowflake: Diversity and Adaptation of Cold-Loving Bacteria among Ice Crystals

inferred← citeshttps://doi.org/10.3390/microorganisms9071374openalex-snapshot

The Microbiome Associated with the Reef Builder Neogoniolithon sp. in the Eastern Mediterranean

inferred← citeshttps://doi.org/10.5194/bg-16-3941-2019openalex-snapshot

Microbial community composition and abundance after millennia of submarine permafrost warming

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