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Chemogenomic Active Learning's Domain of Applicability on Small, Sparse qHTS Matrices: A Study Using Cytochrome P450 and Nuclear Hormone Receptor Families

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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inferredcites →https://doi.org/10.1016/j.bbamcr.2014.05.003openalex-snapshot
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inferredcites →https://doi.org/10.1016/j.cmet.2012.01.019openalex-snapshot
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What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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inferred← citeshttps://doi.org/10.1021/acschembio.9b00169openalex-snapshot
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inferred← citeshttps://doi.org/10.1289/ehp8495openalex-snapshot
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inferred← citeshttps://doi.org/10.1371/journal.pcbi.1006813openalex-snapshot
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inferred← citeshttps://doi.org/10.3390/molecules24152716openalex-snapshot
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inferred← citeshttps://doi.org/10.4155/fmc-2018-0188openalex-snapshot
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