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Real‐Time Spatial Gene Expression Analysis within Current‐Producing Biofilms

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/bit.21533openalex-snapshot
Conduction-based modeling of the biofilm anode of a microbial fuel cell
inferredcites →https://doi.org/10.1002/bit.21671openalex-snapshot
Electrochemical characterization of Geobacter sulfurreducens cells immobilized on graphite paper electrodes
inferredcites →https://doi.org/10.1002/bit.21821openalex-snapshot
Proton transport inside the biofilm limits electrical current generation by anode‐respiring bacteria
inferredcites →https://doi.org/10.1007/s00248-003-0004-4openalex-snapshot
Microbial Communities Associated with Electrodes Harvesting Electricity from a Variety of Aquatic Sediments
inferredcites →https://doi.org/10.1007/s00253-003-1412-6openalex-snapshot
Enrichment of microbial community generating electricity using a fuel-cell-type electrochemical cell
inferredcites →https://doi.org/10.1007/s00253-007-1162-yopenalex-snapshot
Comparison of anode bacterial communities and performance in microbial fuel cells with different electron donors
inferredcites →https://doi.org/10.1016/0378-1119(95)00584-1openalex-snapshot
Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
inferredcites →https://doi.org/10.1016/0378-1119(95)00685-0openalex-snapshot
FACS-optimized mutants of the green fluorescent protein (GFP)
inferredcites →https://doi.org/10.1016/j.biortech.2009.09.054openalex-snapshot
Microbial fuel cells operating on mixed fatty acids
inferredcites →https://doi.org/10.1016/j.biortech.2010.05.017openalex-snapshot
Long-term cathode performance and the microbial communities that develop in microbial fuel cells fed different fermentation endproducts
inferredcites →https://doi.org/10.1016/j.biortech.2010.05.019openalex-snapshot
Anode microbial communities produced by changing from microbial fuel cell to microbial electrolysis cell operation using two different wastewaters
inferredcites →https://doi.org/10.1016/j.bios.2009.05.004openalex-snapshot
Selection of a variant of Geobacter sulfurreducens with enhanced capacity for current production in microbial fuel cells
inferredcites →https://doi.org/10.1016/j.copbio.2008.10.005openalex-snapshot
The microbe electric: conversion of organic matter to electricity
inferredcites →https://doi.org/10.1016/j.copbio.2011.01.009openalex-snapshot
A shift in the current: New applications and concepts for microbe-electrode electron exchange
inferredcites →https://doi.org/10.1016/j.electacta.2008.02.056openalex-snapshot
Electrochemical activity of Geobacter sulfurreducens biofilms on stainless steel anodes
inferredcites →https://doi.org/10.1016/j.ymben.2008.06.005openalex-snapshot
Geobacter sulfurreducens strain engineered for increased rates of respiration
inferredcites →https://doi.org/10.1021/es050457eopenalex-snapshot
Remediation and Recovery of Uranium from Contaminated Subsurface Environments with Electrodes
inferredcites →https://doi.org/10.1021/es8031055openalex-snapshot
Influence of Heterogeneous Ammonium Availability on Bacterial Community Structure and the Expression of Nitrogen Fixation and Ammonium Transporter Genes during in Situ Bioremediation of Uranium-Contaminated Groundwater
inferredcites →https://doi.org/10.1021/es902165yopenalex-snapshot
Selecting Anode-Respiring Bacteria Based on Anode Potential: Phylogenetic, Electrochemical, and Microscopic Characterization
inferredcites →https://doi.org/10.1038/ismej.2009.137openalex-snapshot
Microtoming coupled to microarray analysis to evaluate the spatial metabolic status of Geobacter sulfurreducens biofilms
inferredcites →https://doi.org/10.1038/nature03661openalex-snapshot
Extracellular electron transfer via microbial nanowires
inferredcites →https://doi.org/10.1038/nbt1037openalex-snapshot
Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein
inferredcites →https://doi.org/10.1038/nbt716openalex-snapshot
Harnessing microbially generated power on the seafloor
inferredcites →https://doi.org/10.1038/nnano.2011.119openalex-snapshot
Tunable metallic-like conductivity in microbial nanowire networks
inferredcites →https://doi.org/10.1038/nrmicro1442openalex-snapshot
Bug juice: harvesting electricity with microorganisms
inferredcites →https://doi.org/10.1038/nrmicro1838openalex-snapshot
Physiological heterogeneity in biofilms
inferredcites →https://doi.org/10.1039/b816445bopenalex-snapshot
Novel strategy for three-dimensional real-time imaging of microbial fuel cell communities: monitoring the inhibitory effects of proton accumulation within the anode biofilm
inferredcites →https://doi.org/10.1039/b816647aopenalex-snapshot
Cyclic voltammetry of biofilms of wild type and mutant Geobacter sulfurreducens on fuel cell anodes indicates possible roles of OmcB, OmcZ, type IV pili, and protons in extracellular electron transfer
inferredcites →https://doi.org/10.1094/mpmi.2000.13.11.1243openalex-snapshot
Improved gfp and inaZ Broad-Host-Range Promoter-Probe Vectors
inferredcites →https://doi.org/10.1099/00221287-147-5-1383openalex-snapshot
Assessment of GFP fluorescence in cells of Streptococcus gordonii under conditions of low pH and low oxygen concentration
inferredcites →https://doi.org/10.1111/j.1462-2920.2004.00593.xopenalex-snapshot
Graphite electrodes as electron donors for anaerobic respiration
inferredcites →https://doi.org/10.1111/j.1462-2920.2006.01065.xopenalex-snapshot
Microarray and genetic analysis of electron transfer to electrodes in Geobacter sulfurreducens
inferredcites →https://doi.org/10.1111/j.1462-2920.2008.01675.xopenalex-snapshot
Power output and columbic efficiencies from biofilms of Geobacter sulfurreducens comparable to mixed community microbial fuel cells
inferredcites →https://doi.org/10.1111/j.1462-2920.2010.02302.xopenalex-snapshot
A c‐type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution
inferredcites →https://doi.org/10.1111/j.1472-4669.2008.00148.xopenalex-snapshot
Extracellular electron transfer: wires, capacitors, iron lungs, and more
inferredcites →https://doi.org/10.1111/j.1758-2229.2009.00118.xopenalex-snapshot
Reductive dechlorination of 2‐chlorophenol by Anaeromyxobacter dehalogenans with an electrode serving as the electron donor
inferredcites →https://doi.org/10.1111/j.1758-2229.2010.00210.xopenalex-snapshot
Specific localization of the c ‐type cytochrome OmcZ at the anode surface in current‐producing biofilms of Geobacter sulfurreducens
inferredcites →https://doi.org/10.1126/science.1066771openalex-snapshot
Electrode-Reducing Microorganisms That Harvest Energy from Marine Sediments
inferredcites →https://doi.org/10.1126/science.6585956openalex-snapshot
A Nitrogen Pressure of 50 Atmospheres Does Not Prevent Evolution of Hydrogen by Nitrogenase
inferredcites →https://doi.org/10.1128/9781555815547.ch23openalex-snapshot
Electricity Production with Electricigens
inferredcites →https://doi.org/10.1128/aem.00023-10openalex-snapshot
Alignment of the c -Type Cytochrome OmcS along Pili of Geobacter sulfurreducens
inferredcites →https://doi.org/10.1128/aem.00027-10openalex-snapshot
Purification and Characterization of OmcZ, an Outer-Surface, Octaheme c -Type Cytochrome Essential for Optimal Current Production by Geobacter sulfurreducens
inferredcites →https://doi.org/10.1128/aem.00177-08openalex-snapshot
Microbial Biofilm Voltammetry: Direct Electrochemical Characterization of Catalytic Electrode-Attached Biofilms
inferredcites →https://doi.org/10.1128/aem.01163-06openalex-snapshot
Spatiometabolic Stratification of Shewanella oneidensis Biofilms
inferredcites →https://doi.org/10.1128/aem.01444-06openalex-snapshot
Biofilm and Nanowire Production Leads to Increased Current in Geobacter sulfurreducens Fuel Cells
inferredcites →https://doi.org/10.1128/aem.02642-10openalex-snapshot
Electrosynthesis of Organic Compounds from Carbon Dioxide Is Catalyzed by a Diversity of Acetogenic Microorganisms
inferredcites →https://doi.org/10.1128/aem.54.6.1472-1480.1988openalex-snapshot
Novel Mode of Microbial Energy Metabolism: Organic Carbon Oxidation Coupled to Dissimilatory Reduction of Iron or Manganese
inferredcites →https://doi.org/10.1128/aem.64.6.2240-2246.1998openalex-snapshot
New Unstable Variants of Green Fluorescent Protein for Studies of Transient Gene Expression in Bacteria
inferredcites →https://doi.org/10.1128/aem.65.9.4108-4117.1999openalex-snapshot
Distribution of Bacterial Growth Activity in Flow-Chamber Biofilms
inferredcites →https://doi.org/10.1128/aem.67.7.3180-3187.2001openalex-snapshot
Development of a Genetic System for Geobacter sulfurreducens
inferredcites →https://doi.org/10.1128/aem.69.3.1548-1555.2003openalex-snapshot
Electricity Production by Geobacter sulfurreducens Attached to Electrodes
inferredcites →https://doi.org/10.1128/aem.70.10.6188-6196.2004openalex-snapshot
Stratified Growth in Pseudomonas aeruginosa Biofilms
inferredcites →https://doi.org/10.1128/aem.70.12.7251-7259.2004openalex-snapshot
In Situ Expression of nifD in Geobacteraceae in Subsurface Sediments
inferredcites →https://doi.org/10.1128/aem.71.11.6870-6877.2005openalex-snapshot
Potential for Quantifying Expression of the Geobacteraceae Citrate Synthase Gene To Assess the Activity of Geobacteraceae in the Subsurface and on Current-Harvesting Electrodes
inferredcites →https://doi.org/10.1128/aem.71.12.8634-8641.2005openalex-snapshot
Outer Membranec-Type Cytochromes Required for Fe(III) and Mn(IV) Oxide Reduction inGeobacter sulfurreducens
inferredcites →https://doi.org/10.1128/aem.71.7.3858-3865.2005openalex-snapshot
Characterization of Citrate Synthase from Geobacter sulfurreducens and Evidence for a Family of Citrate Synthases Similar to Those of Eukaryotes throughout the Geobacteraceae
inferredcites →https://doi.org/10.1128/jb.00057-09openalex-snapshot
Identification of Genes Involved in Biofilm Formation and Respiration via Mini- Himar Transposon Mutagenesis of Geobacter sulfurreducens
inferredcites →https://doi.org/10.1128/jb.185.7.2096-2103.2003openalex-snapshot
OmcB, a c -Type Polyheme Cytochrome, Involved in Fe(III) Reduction in Geobacter sulfurreducens
inferredcites →https://doi.org/10.1128/mbio.00103-10openalex-snapshot
Microbial Electrosynthesis: Feeding Microbes Electricity To Convert Carbon Dioxide and Water to Multicarbon Extracellular Organic Compounds
inferredcites →https://doi.org/10.1186/1471-2180-10-98openalex-snapshot
Initial development and structure of biofilms on microbial fuel cell anodes
inferredcites →https://doi.org/10.1186/1471-2180-5-41openalex-snapshot
A novel Geobacteraceae-specific outer membrane protein J (OmpJ) is essential for electron transport to Fe (III) and Mn (IV) oxides in Geobacter sulfurreducens
inferredcites →https://doi.org/10.1186/1472-6785-6-1openalex-snapshot
Analysis of a marine phototrophic biofilm by confocal laser scanning microscopy using the new image quantification software PHLIP
inferredcites →https://doi.org/10.1371/journal.pone.0005628openalex-snapshot
Anode Biofilm Transcriptomics Reveals Outer Surface Components Essential for High Density Current Production in Geobacter sulfurreducens Fuel Cells

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Elucidating the Development of Cooperative Anode‐Biofilm‐Structures
inferred← citeshttps://doi.org/10.1002/biot.201400068openalex-snapshot
Metabolic modeling of spatial heterogeneity of biofilms in microbial fuel cells reveals substrate limitations in electrical current generation
inferred← citeshttps://doi.org/10.1002/cssc.201200671openalex-snapshot
Limitations for Current Production in Geobacter sulfurreducens Biofilms
inferred← citeshttps://doi.org/10.1002/cssc.201300605openalex-snapshot
Physiological Stratification in Electricity‐Producing Biofilms of Geobacter sulfurreducens
inferred← citeshttps://doi.org/10.1007/11663_2013_2openalex-snapshot
Electron transfer mechanisms between microorganisms and electrodes in bioelectrochemical systems
inferred← citeshttps://doi.org/10.1007/978-1-4939-9686-5_7openalex-snapshot
Structure and Fluorescence Intensity Measurements in Biofilms
inferred← citeshttps://doi.org/10.1007/s11356-024-33612-3openalex-snapshot
Influence of support materials on the electroactive behavior, structure and gene expression of wild type and GSU1771-deficient mutant of Geobacter sulfurreducens biofilms
inferred← citeshttps://doi.org/10.1007/s12566-012-0033-xopenalex-snapshot
Electron transfer mechanisms between microorganisms and electrodes in bioelectrochemical systems
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Electron transfer mechanisms in biofilms
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Extracellular electron transfer: From early life to modern biogeochemistry and applications
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A framework for modeling electroactive microbial biofilms performing direct electron transfer
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Elucidating the development of cooperative anode-biofilm-structures
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Electron transfer process in microbial electrochemical technologies: The role of cell-surface exposed conductive proteins
inferred← citeshttps://doi.org/10.1016/j.bios.2019.111748openalex-snapshot
Flagella act as Geobacter biofilm scaffolds to stabilize biofilm and facilitate extracellular electron transfer
inferred← citeshttps://doi.org/10.1016/j.biteb.2022.101028openalex-snapshot
Real-time monitoring of biofilm thickness allows for determination of acetate limitations in bio-anodes
inferred← citeshttps://doi.org/10.1016/j.cej.2025.168691openalex-snapshot
Evaluation of key operational parameters in a novel pilot-scale rotating disk bioelectrochemical reactor for hydrogen production in a wastewater biorefinery
inferred← citeshttps://doi.org/10.1016/j.copbio.2013.12.003openalex-snapshot
Microbial nanowires for bioenergy applications
inferred← citeshttps://doi.org/10.1016/j.electacta.2017.01.091openalex-snapshot
Cytochrome OmcZ is essential for the current generation by Geobacter sulfurreducens under low electrode potential
inferred← citeshttps://doi.org/10.1016/j.envres.2021.111572openalex-snapshot
Buffer capacity regulates the stratification of anode-respiring biofilm during brewery wastewater treatment
inferred← citeshttps://doi.org/10.1016/j.jelechem.2016.11.005openalex-snapshot
Proving Geobacter biofilm connectivity with confocal Raman microscopy
inferred← citeshttps://doi.org/10.1016/j.jpowsour.2016.11.115openalex-snapshot
Current density reversibly alters metabolic spatial structure of exoelectrogenic anode biofilms
inferred← citeshttps://doi.org/10.1016/j.jpowsour.2026.239274openalex-snapshot
Synergy in silence: Microbial communities driving green energy in Microbial Fuel Cells
inferred← citeshttps://doi.org/10.1016/j.mimet.2017.06.021openalex-snapshot
Understanding the fundamental mechanisms of biofilms development and dispersal: BIAM (Biofilm Intensity and Architecture Measurement), a new tool for studying biofilms as a function of their architecture and fluorescence intensity
inferred← citeshttps://doi.org/10.1016/j.rser.2020.110184openalex-snapshot
The micro-niche of exoelectrogens influences bioelectricity generation in bioelectrochemical systems
inferred← citeshttps://doi.org/10.1021/acs.est.2c08443openalex-snapshot
Prophage Induction Causes Geobacter Electroactive Biofilm Decay
inferred← citeshttps://doi.org/10.1021/acs.est.5b00175openalex-snapshot
Temporal-Spatial Changes in Viabilities and Electrochemical Properties of Anode Biofilms
inferred← citeshttps://doi.org/10.1021/acs.est.5c16170openalex-snapshot
Spatial Heterogeneity in Electrochemically Active Biofilms: Mechanism, Measurement, and Future Perspectives
inferred← citeshttps://doi.org/10.1021/acselectrochem.5c00517openalex-snapshot
Operando Microscopy of Photosynthetic Microbial Biohybrids Using Fluorescent Chemical Probes
inferred← citeshttps://doi.org/10.1021/es504546gopenalex-snapshot
Electron Acceptor-Dependent Respiratory and Physiological Stratifications in Biofilms
inferred← citeshttps://doi.org/10.1038/ncomms3751openalex-snapshot
Probing single- to multi-cell level charge transport in Geobacter sulfurreducens DL-1
inferred← citeshttps://doi.org/10.1039/c3cp50411eopenalex-snapshot
Stepping stones in the electron transport from cells to electrodes in Geobacter sulfurreducens biofilms
inferred← citeshttps://doi.org/10.1039/c3cp51076jopenalex-snapshot
In situ fluorescence and electrochemical monitoring of a photosynthetic microbial fuel cell
inferred← citeshttps://doi.org/10.1039/c3cp54045fopenalex-snapshot
High current density via direct electron transfer by the halophilic anode respiring bacterium Geoalkalibacter subterraneus
inferred← citeshttps://doi.org/10.1039/c3ee40203gopenalex-snapshot
Metabolic spatial variability in electrode-respiring Geobacter sulfurreducens biofilms
inferred← citeshttps://doi.org/10.1039/c3ee43106aopenalex-snapshot
Towards sustainable wastewater treatment by using microbial fuel cells-centered technologies
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Electroanalysis of microbial anodes for bioelectrochemical systems: basics, progress and perspectives
inferred← citeshttps://doi.org/10.1042/bst20120131openalex-snapshot
Long-range electron transport to Fe(III) oxide via pili with metallic-like conductivity
inferred← citeshttps://doi.org/10.1073/pnas.1912498116openalex-snapshot
NanoSIMS imaging reveals metabolic stratification within current-producing biofilms
inferred← citeshttps://doi.org/10.1128/aem.02289-14openalex-snapshot
Enhanced Uranium Immobilization and Reduction by Geobacter sulfurreducens Biofilms
inferred← citeshttps://doi.org/10.1128/mbio.00105-13openalex-snapshot
Aromatic Amino Acids Required for Pili Conductivity and Long-Range Extracellular Electron Transport in Geobacter sulfurreducens
inferred← citeshttps://doi.org/10.1128/mbio.00144-13openalex-snapshot
Generation of High Current Densities by Pure Cultures of Anode-Respiring Geoalkalibacter spp. under Alkaline and Saline Conditions in Microbial Electrochemical Cells
inferred← citeshttps://doi.org/10.1128/mbio.00906-26openalex-snapshot
A bundled anti-parallel cytochrome nanowire structure suggests roles in cell-cell electron transfer and biofilm formation
inferred← citeshttps://doi.org/10.1146/annurev-micro-032221-023725openalex-snapshot
Electron Transfer Beyond the Outer Membrane: Putting Electrons to Rest
inferred← citeshttps://doi.org/10.1186/1471-2180-13-182openalex-snapshot
OmpR and RcsB abolish temporal and spatial changes in expression of flhD in Escherichia coli Biofilm
inferred← citeshttps://doi.org/10.1186/1471-2180-13-186openalex-snapshot
Insights into xanthomonas axonopodis pv. citri biofilm through proteomics
inferred← citeshttps://doi.org/10.1371/journal.pone.0104336openalex-snapshot
Abundance of the Multiheme c-Type Cytochrome OmcB Increases in Outer Biofilm Layers of Electrode-Grown Geobacter sulfurreducens
inferred← citeshttps://doi.org/10.3389/fchem.2025.1621274openalex-snapshot
Electron transport across the cell envelope via multiheme c-type cytochromes in Geobacter sulfurreducens
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Investigating microbial activities of electrode-associated microorganisms in real-time
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Link between capacity for current production and syntrophic growth in Geobacter species
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Construction of a Geobacter Strain With Exceptional Growth on Cathodes
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Isolation and Identification of Alkaloid Genes from the Biomass of Fritillaria taipaiensis P.Y. Li
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Microfluidic Microbial Bioelectrochemical Systems: An Integrated Investigation Platform for a More Fundamental Understanding of Electroactive Bacterial Biofilms
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Microbial Electrochemical Technologies for Wastewater Treatment: Principles and Evolution from Microbial Fuel Cells to Bioelectrochemical-Based Constructed Wetlands
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Structure of Geobacter OmcZ filaments suggests extracellular cytochrome polymers evolved independently multiple times
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