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Life cycle matters: DNA barcoding reveals contrasting community structure between fern sporophytes and gametophytes

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/j.1537-2197.1988.tb13503.xopenalex-snapshot

SAFE SITES AND THE ECOLOGICAL LIFE HISTORY OF LORINSERIA AREOLATA

inferredcites →https://doi.org/10.1007/bf02812705openalex-snapshot

Significance of gametophyte form in long-distance colonization by tropical, epiphytic ferns

inferredcites →https://doi.org/10.1007/bf02859157openalex-snapshot

Gametophytes of homosporous ferns

inferredcites →https://doi.org/10.1007/s00606-009-0188-2openalex-snapshot

Identifying a mysterious aquatic fern gametophyte

inferredcites →https://doi.org/10.1007/s10265-016-0897-xopenalex-snapshot

Not only in the temperate zone: independent gametophytes of two vittarioid ferns (Pteridaceae, Polypodiales) in East Asian subtropics

inferredcites →https://doi.org/10.1007/s10584-016-1734-xopenalex-snapshot

Fern species richness and abundance are indicators of climate change on high-elevation islands: evidence from an elevational gradient on Tahiti (French Polynesia)

inferredcites →https://doi.org/10.1007/s10592-005-9073-xopenalex-snapshot

Development and characterization of polymorphic microsatellite loci in endangered fern Adiantum reniforme var. sinense

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DNA barcoding for ecologists

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Low-copy nuclear DNA sequences reveal a predominance of allopolyploids in a New Zealand Asplenium fern complex

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First insights into fern matK phylogeny

inferredcites →https://doi.org/10.1016/j.ympev.2015.05.008openalex-snapshot

Horsetails are the sister group to all other monilophytes and Marattiales are sister to leptosporangiate ferns

inferredcites →https://doi.org/10.1016/s0169-5347(99)01767-xopenalex-snapshot

The mid-domain effect: geometric constraints on the geography of species richness

inferredcites →https://doi.org/10.1016/s0304-3800(01)00501-4openalex-snapshot

All-scale spatial analysis of ecological data by means of principal coordinates of neighbour matrices

inferredcites →https://doi.org/10.1017/cbo9780511541827.010openalex-snapshot

Gametophyte ecology

inferredcites →https://doi.org/10.1023/a:1011811224595openalex-snapshot

Pteridophyte species richness in Andean forests in Bolivia

inferredcites →https://doi.org/10.1038/35054555openalex-snapshot

Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants

inferredcites →https://doi.org/10.1038/nature02361openalex-snapshot

Ferns diversified in the shadow of angiosperms

inferredcites →https://doi.org/10.1043/02-64.1openalex-snapshot

Paraphyly of Tarasa (Malvaceae) and Diverse Origins of the Polyploid Species

inferredcites →https://doi.org/10.1073/pnas.0811136106openalex-snapshot

Evidence for a Cenozoic radiation of ferns in an angiosperm-dominated canopy

inferredcites →https://doi.org/10.1073/pnas.0909820106openalex-snapshot

Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama

inferredcites →https://doi.org/10.1073/pnas.1406468111openalex-snapshot

Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics

inferredcites →https://doi.org/10.1080/10635150802406343openalex-snapshot

The Use of Mean Instead of Smallest Interspecific Distances Exaggerates the Size of the “Barcoding Gap” and Leads to Misidentification

inferredcites →https://doi.org/10.1086/297476openalex-snapshot

Significance of Form in Fern Gametophytes: Clonal, Gemmiferous Gametophytes of Callistopteris baueriana (Hymenophyllaceae)

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Exploring the Phylogenetic Structure of Ecological Communities: An Example for Rain Forest Trees

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The Mid‐Domain Effect and Species Richness Patterns:What Have We Learned So Far?

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Phylogenetic Overdispersion in Floridian Oak Communities

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trnL-F is a powerful marker for DNA identification of field vittarioid gametophytes (Pteridaceae)

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APE: Analyses of Phylogenetics and Evolution in R language

inferredcites →https://doi.org/10.1093/bioinformatics/btl446openalex-snapshot

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

inferredcites →https://doi.org/10.1093/bioinformatics/btm619openalex-snapshot

Phyutility: a phyloinformatics tool for trees, alignments and molecular data

inferredcites →https://doi.org/10.1093/bioinformatics/btq166openalex-snapshot

Picante: R tools for integrating phylogenies and ecology

inferredcites →https://doi.org/10.1093/bioinformatics/bts199openalex-snapshot

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

inferredcites →https://doi.org/10.1093/bioinformatics/bts492openalex-snapshot

treePL: divergence time estimation using penalized likelihood for large phylogenies

inferredcites →https://doi.org/10.1093/biomet/37.1-2.17openalex-snapshot

NOTES ON CONTINUOUS STOCHASTIC PHENOMENA

inferredcites →https://doi.org/10.1093/jpe/rtm001openalex-snapshot

Studying beta diversity: ecological variation partitioning by multiple regression and canonical analysis

inferredcites →https://doi.org/10.1093/nar/25.17.3389openalex-snapshot

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

inferredcites →https://doi.org/10.1093/nar/gkf436openalex-snapshot

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

inferredcites →https://doi.org/10.1093/sysbio/syw022openalex-snapshot

Detecting Hidden Diversification Shifts in Models of Trait-Dependent Speciation and Extinction

inferredcites →https://doi.org/10.1098/rspb.2002.2218openalex-snapshot

Biological identifications through DNA barcodes

inferredcites →https://doi.org/10.1111/geb.12294openalex-snapshot

Phylogenetic relatedness within N eotropical fern communities increases with soil fertility

inferredcites →https://doi.org/10.1111/j.1096-0031.2011.00370.xopenalex-snapshot

On the inappropriate use of Kimura‐2‐parameter (K2P) divergences in the DNA‐barcoding literature

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Phylogenetic diversity, trait diversity and niches: species assembly of ferns along a tropical elevational gradient

inferredcites →https://doi.org/10.1111/j.1466-8238.2011.00653.xopenalex-snapshot

A global comparative analysis of elevational species richness patterns of ferns

inferredcites →https://doi.org/10.1111/j.1469-8137.2007.02194.xopenalex-snapshot

Ecological and evolutionary consequences of desiccation tolerance in tropical fern gametophytes

inferredcites →https://doi.org/10.1111/j.1471-8286.2006.01424.xopenalex-snapshot

Identifying fern gametophytes using DNA sequences

inferredcites →https://doi.org/10.1111/j.1558-5646.2011.01507.xopenalex-snapshot

DOES HYBRIDIZATION DRIVE THE TRANSITION TO ASEXUALITY IN DIPLOID BOECHERA?

inferredcites →https://doi.org/10.1111/j.1600-0587.2010.06548.xopenalex-snapshot

Phylogenetic community structure and phylogenetic turnover across space and edaphic gradients in western Amazonian tree communities

inferredcites →https://doi.org/10.1111/j.1600-0587.2011.07181.xopenalex-snapshot

Change in community phylogenetic structure during tropical forest succession: evidence from New Guinea

inferredcites →https://doi.org/10.1111/jbi.12339openalex-snapshot

Evolutionary patterns in the assembly of fern diversity on the oceanic Mascarene Islands

inferredcites →https://doi.org/10.1111/jbi.12723openalex-snapshot

Molecular phylogeography of the Society Islands (Tahiti; South Pacific) reveals departures from hotspot archipelago models

inferredcites →https://doi.org/10.1111/jse.12229openalex-snapshot

A community‐derived classification for extant lycophytes and ferns

inferredcites →https://doi.org/10.1126/science.155.3767.1266openalex-snapshot

Gametophytes of Four Tropical Fern Genera Reproducing Independently of Their Sporophytes in the Southern Appalachians

inferredcites →https://doi.org/10.1130/0091-7613(1975)3<236:kaotam>2.0.co;2openalex-snapshot

K-Ar ages of Tahiti and Moorea, Society Islands, and implications for the hot-spot model

inferredcites →https://doi.org/10.1146/annurev.ecolsys.33.010802.150448openalex-snapshot

Phylogenies and Community Ecology

inferredcites →https://doi.org/10.1186/1471-2148-9-37openalex-snapshot

Mega-phylogeny approach for comparative biology: an alternative to supertree and supermatrix approaches

inferredcites →https://doi.org/10.1186/1471-2164-10-520openalex-snapshot

The effect of sequencing errors on metagenomic gene prediction

inferredcites →https://doi.org/10.1353/psc.2003.0024openalex-snapshot

Pteridophytes of Moorea, French Polynesia, with a New Species, Tmesipteris gracilis (Psilotaceae)

inferredcites →https://doi.org/10.1371/journal.pone.0000508openalex-snapshot

A Two-Locus Global DNA Barcode for Land Plants: The Coding rbcL Gene Complements the Non-Coding trnH-psbA Spacer Region

inferredcites →https://doi.org/10.1371/journal.pone.0015136openalex-snapshot

Molecular Species Identification with Rich Floristic Sampling: DNA Barcoding the Pteridophyte Flora of Japan

inferredcites →https://doi.org/10.1371/journal.pone.0016371openalex-snapshot

Use of rbcL and trnL-F as a Two-Locus DNA Barcode for Identification of NW-European Ferns: An Ecological Perspective

inferredcites →https://doi.org/10.1371/journal.pone.0024851openalex-snapshot

Towards Resolving the Complete Fern Tree of Life

inferredcites →https://doi.org/10.1371/journal.pone.0026597openalex-snapshot

rbcL and matK Earn Two Thumbs Up as the Core DNA Barcode for Ferns

inferredcites →https://doi.org/10.1371/journal.pone.0112843openalex-snapshot

A Well-Resolved Phylogeny of the Trees of Puerto Rico Based on DNA Barcode Sequence Data

inferredcites →https://doi.org/10.1371/journal.pone.0131162openalex-snapshot

Phylogenetic Structure of Tree Species across Different Life Stages from Seedlings to Canopy Trees in a Subtropical Evergreen Broad-Leaved Forest

inferredcites →https://doi.org/10.1600/036364408786500127openalex-snapshot

The Utility of Nuclear gapCp in Resolving Polyploid Fern Origins

inferredcites →https://doi.org/10.1640/0002-8444(2005)095[0001:iitbap]2.0.co;2openalex-snapshot

Insights into the Biogeography and Polyploid Evolution of New Zealand Asplenium from Chloroplast DNA Sequence Data

inferredcites →https://doi.org/10.1640/0002-8444(2005)095[0126:sn]2.0.co;2openalex-snapshot

New Records of Lycophytes and Ferns from Moorea, French Polynesia

inferredcites →https://doi.org/10.1640/0002-8444-101.1.36openalex-snapshot

Pteridophytes of Mo'orea, French Polynesia: Additional New Records

inferredcites →https://doi.org/10.1890/0012-9658(2006)87[123:psmssa]2.0.co;2openalex-snapshot

PHYLODIVERSITY-DEPENDENT SEEDLING MORTALITY, SIZE STRUCTURE, AND DISEASE IN A BORNEAN RAIN FOREST

inferredcites →https://doi.org/10.1890/04-1420openalex-snapshot

FERN COMMUNITY ASSEMBLY: THE ROLES OF CHANCE AND THE ENVIRONMENT AT LOCAL AND INTERMEDIATE SCALES

inferredcites →https://doi.org/10.1890/06-2124.1openalex-snapshot

MICROSITE-LIMITED RECRUITMENT CONTROLS FERN COLONIZATION OF POST-AGRICULTURAL FORESTS

inferredcites →https://doi.org/10.1890/13-0133.1openalex-snapshot

Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies

inferredcites →https://doi.org/10.2307/1547200openalex-snapshot

Influences of Life History Attributes on Formation of Local and Distant Fern Populations

inferredcites →https://doi.org/10.2307/1547542openalex-snapshot

A New Hymenophyllum Species in the Appalachians Represented by Independent Gametophyte Colonies

inferredcites →https://doi.org/10.2307/1547574openalex-snapshot

Vittaria appalachiana: A Name for the "Appalachian Gametophyte"

inferredcites →https://doi.org/10.2307/2389544openalex-snapshot

Antheridiogen in the Wild: The Development of Fern Gametophyte Communities

inferredcites →https://doi.org/10.2307/2419020openalex-snapshot

Species and Evolution in Asexually Reproducing Independent Fern Gametophytes

inferredcites →https://doi.org/10.2307/25065903openalex-snapshot

Fern phylogeny inferred from 400 leptosporangiate species and three plastid genes

inferredcites →https://doi.org/10.2307/2989765openalex-snapshot

Development and Evolution of Fern Floras of Oceanic Islands

inferredcites →https://doi.org/10.2307/3236631openalex-snapshot

Pteridophyte diversity and species composition in four Amazonian rain forests

inferredcites →https://doi.org/10.2307/3802723openalex-snapshot

Model Selection and Multimodel Inference: A Practical Information-Theoretic Approach

inferredcites →https://doi.org/10.2307/5692openalex-snapshot

Hawaiian Biogeography: Evolution on a Hotspot Archipelago

inferredcites →https://doi.org/10.32614/cran.package.muminopenalex-snapshot

MuMIn: Multi-Model Inference

inferredcites →https://doi.org/10.3389/fpls.2013.00285openalex-snapshot

The physiological resilience of fern sporophytes and gametophytes: advances in water relations offer new insights into an old lineage

inferredcites →https://doi.org/10.3732/ajb.0800122openalex-snapshot

The sporophyte‐less filmy fern of eastern North America Trichomanes intricatum (Hymenophyllaceae) has the chloroplast genome of an Asian species

inferredcites →https://doi.org/10.3732/ajb.1200416openalex-snapshot

Land plant evolutionary timeline: Gene effects are secondary to fossil constraints in relaxed clock estimation of age and substitution rates

inferredcites →https://doi.org/10.3732/ajb.1200555openalex-snapshot

A survey of the fern gametophyte flora of Japan: Frequent independent occurrences of noncordiform gametophytes

inferredcites →https://doi.org/10.3732/ajb.1500089openalex-snapshot

The evolutionary history of ferns inferred from 25 low‐copy nuclear genes

inferredcites →https://doi.org/10.3732/ajb.1500323openalex-snapshot

Vittaria appalachiana continues to provide insight into the biology of ferns: A commentary on two studies recently published in American Journal of Botany

inferredcites →https://doi.org/10.3732/ajb.1500522openalex-snapshot

Unraveling the origin of the Appalachian gametophyte, Vittaria appalachiana

inferredcites →https://doi.org/10.3732/ajb.91.10.1582openalex-snapshot

Phylogeny and evolution of ferns (monilophytes) with a focus on the early leptosporangiate divergences

inferredcites →https://doi.org/10.3732/ajb.94.4.701openalex-snapshot

Gametophyte ecology and demography of epiphytic and terrestrial tropical ferns

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Contribution to the DNA barcode reference library for Réunion Pteridophyta

inferred← citeshttps://doi.org/10.1002/ajb2.1073openalex-snapshot

Community assembly of the ferns of Florida

inferred← citeshttps://doi.org/10.1002/ajb2.1848openalex-snapshot

Spatial phylogenetics of Japanese ferns: Patterns, processes, and implications for conservation

inferred← citeshttps://doi.org/10.1002/aps3.11462openalex-snapshot

Integrating tissue‐direct PCR into genetic identification: An upgraded molecular ecology approach to survey fern gametophytes in the field

inferred← citeshttps://doi.org/10.1002/aps3.11464openalex-snapshot

The ecology and physiology of fern gametophytes: A methodological synthesis

inferred← citeshttps://doi.org/10.1002/aps3.11465openalex-snapshot

Identifying cryptic fern gametophytes using DNA barcoding: A review

inferred← citeshttps://doi.org/10.1002/aps3.11466openalex-snapshot

An experimental assessment of competitive interactions between sexual and apomictic fern gametophytes using Easy Leaf Area

inferred← citeshttps://doi.org/10.1002/aps3.11473openalex-snapshot

Providing the missing links in fern life history: Insights from a phenological survey of the gametophyte stage

inferred← citeshttps://doi.org/10.1002/aps3.11475openalex-snapshot

PhyloHerb: A high‐throughput phylogenomic pipeline for processing genome skimming data

inferred← citeshttps://doi.org/10.1002/ece3.6510openalex-snapshot

Study of the independent gametophytes found on Jeju Island in South Korea and the first record of the obligate independent gametophyte of Antrophyum obovatum Baker

inferred← citeshttps://doi.org/10.1002/ece3.73324openalex-snapshot

Fern Gametophytes Exhibit Distinct Patterns of Niche Expansion and Convergence in Ecophysiological Functioning

inferred← citeshttps://doi.org/10.1002/inc3.60openalex-snapshot

Rapid DNA barcoding‐based fern and lycophyte inventories of protected areas—A pilot study to introduce a simple but effective protocol

inferred← citeshttps://doi.org/10.1002/inc3.70037openalex-snapshot

Staghorn Ferns in Botanical Gardens: Which Species Do We Really Cultivate or Trade?

inferred← citeshttps://doi.org/10.1002/tax.12992openalex-snapshot

A global phylogeny of grammitid ferns (Polypodiaceae) and its systematic implications

inferred← citeshttps://doi.org/10.1002/tax.13314openalex-snapshot

A phylogenetically informed generic reclassification of the hemionitid ferns (Pteridaceae: Cheilanthoideae)

inferred← citeshttps://doi.org/10.1007/978-3-030-97415-2_19-1openalex-snapshot

Phytochemicals and Biological Activities of Asplenium ceterach

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Phytochemicals and Biological Activities of Asplenium ceterach

inferred← citeshttps://doi.org/10.1007/978-981-16-6170-9_3openalex-snapshot

A Review on Molecular Phylogeny of Pteridophytes Using DNA Barcoding

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Molecular Markers in Pteridophytes

inferred← citeshttps://doi.org/10.1007/s00606-018-1529-9openalex-snapshot

Inferring the potential of plastid DNA-based identification of derived ferns: a case study on the Asplenium trichomanes aggregate in Europe

inferred← citeshttps://doi.org/10.1007/s10265-019-01139-1openalex-snapshot

Virtual issue: Ecology and evolution of pteridophytes in the era of molecular genetics

inferred← citeshttps://doi.org/10.1007/s10265-021-01318-zopenalex-snapshot

Ecophysiological differentiation between life stages in filmy ferns (Hymenophyllaceae)

inferred← citeshttps://doi.org/10.1007/s11105-025-01663-6openalex-snapshot

DNA Barcoding As a Tool for Species Authentication and Conservation of Endemic Ferns From the Western Ghats

inferred← citeshttps://doi.org/10.1016/j.japb.2024.11.008openalex-snapshot

Exploring the diversity of bryophytes through DNA barcoding in montane forests of the Private Conservation Area San Pablo Communal – Gocta Waterfall, Peru

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A composite universal DNA signature for the tree of life

inferred← citeshttps://doi.org/10.1038/s41597-024-04161-8openalex-snapshot

A DNA barcode reference of Asian ferns with expert-identified voucher specimens and DNA samples

inferred← citeshttps://doi.org/10.1080/0028825x.2022.2115931openalex-snapshot

New records of fern species from New Caledonia in the genera Davallia , Dicranopteris , Dryopteris , Pteris , and Trichomanes

inferred← citeshttps://doi.org/10.1080/23818107.2022.2095672openalex-snapshot

Origin of Hawaiian ferns of the genus Ctenitis (Dryopteridaceae)

inferred← citeshttps://doi.org/10.1086/713442openalex-snapshot

From Genomes to Populations: A Meta-analysis and Review of Fern Population Genetics

inferred← citeshttps://doi.org/10.1086/729606openalex-snapshot

Reproduction and Population Dynamics in Autonomous Gametophytes

inferred← citeshttps://doi.org/10.1093/aob/mcag232openalex-snapshot

Ferns on ferns: gametophyte assemblages on tree ferns reveal associations with accidentally epiphytic ferns

inferred← citeshttps://doi.org/10.1093/biosci/biae022openalex-snapshot

Ferns as facilitators of community recovery following biotic upheaval

inferred← citeshttps://doi.org/10.1093/jhered/esaa062openalex-snapshot

The Combined Effect of Haplodiplonty and Partial Clonality on Genotypic and Genetic Diversity in a Finite Mutating Population

inferred← citeshttps://doi.org/10.1093/jhered/esaa063openalex-snapshot

Exploring the Genetic Consequences of Clonality in Haplodiplontic Taxa

inferred← citeshttps://doi.org/10.1098/rsbl.2018.0659openalex-snapshot

Gametophyte niche differences among sympatric tree ferns

inferred← citeshttps://doi.org/10.1101/2021.03.12.435213openalex-snapshot

Ecophysiological differentiation between life stages in filmy ferns (Hymenophyllaceae)

inferred← citeshttps://doi.org/10.1111/brv.70038openalex-snapshot

Effective dispersal of fern spore and the ecological relevance of zoochory

inferred← citeshttps://doi.org/10.1111/cla.12408openalex-snapshot

Evolutionary relationships of the ancient fern lineage the adder's tongues (Ophioglossaceae) with description of Sahashia gen. nov

inferred← citeshttps://doi.org/10.1111/eva.12843openalex-snapshot

What’s ploidy got to do with it? Understanding the evolutionary ecology of macroalgal invasions necessitates incorporating life cycle complexity

inferred← citeshttps://doi.org/10.1111/jpy.12906openalex-snapshot

Incorporating Ploidy Diversity into Ecological and Community Genetics

inferred← citeshttps://doi.org/10.1111/jpy.13059openalex-snapshot

Evolutionary Phycology: Toward a Macroalgal Species Conceptual Framework

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The eco‐evolutionary importance of reproductive system variation in the macroalgae: Freshwater reds as a case study

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Life in the canopy: community trait assessments reveal substantial functional diversity among fern epiphytes

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Polyploidy and environmental stress response: a comparative study of fern gametophytes

inferred← citeshttps://doi.org/10.1134/s1021443726602326openalex-snapshot

Lipid Fatty Acid Composition Features in Alternations of Embryophyta Gametophyte and Sporophyte Generation

inferred← citeshttps://doi.org/10.1371/journal.pone.0241231openalex-snapshot

A taxonomic and molecular survey of the pteridophytes of the Nectandra Cloud Forest Reserve, Costa Rica

inferred← citeshttps://doi.org/10.1600/036364418x697166openalex-snapshot

Microsorum × tohieaense (Polypodiaceae), a New Hybrid Fern from French Polynesia, with Implications for the Taxonomy of Microsorum

inferred← citeshttps://doi.org/10.1640/0002-8444-111.3.205openalex-snapshot

At Least Two Evolutionarily Distinct Species within Histiopteris incisa Inferred from Molecular and Morphological Evidence

inferred← citeshttps://doi.org/10.1640/0002-8444-112.1.1openalex-snapshot

The Spatial Separation of Callistopteris baldwinii (Hymenophyllaceae) Sporophytes and Gametophytes Along Elevational Gradients in Hawai‘i

inferred← citeshttps://doi.org/10.1640/0002-8444-112.3.207openalex-snapshot

Phylogenetic Relationships of Grammitid Fern Diversity of Gunung Tama Abu (Sarawak)

inferred← citeshttps://doi.org/10.1640/0002-8444-112.4.285openalex-snapshot

Mountain Ferns: What Determines Their Elevational Ranges and How Will They Respond to Climate Change?

inferred← citeshttps://doi.org/10.1640/0002-8444-114.4.249openalex-snapshot

Gametophytes of the Potato Fern, Microgramma brunei

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DNA Barcoding in Plants and Animals: A Critical Review

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Two out of one: revising the diversity of the epiphytic fern genus Scleroglossum (Polypodiaceae, Grammitidoideae) in southern China

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