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Effects of temperature and oxygen on cyanobacterial DNA preservation in sediments: A comparison study of major taxa

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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Environmental DNA shedding and decay rates from diverse animal forms and thermal regimes
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Sedimentary eDNA provides different information on timescale and fish species composition compared with aqueous eDNA
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Effects of clay minerals on the aggregation and subsequent settling of marine Synechococcus
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Ecology of cyanobacteria II : their diversity in space and time
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Is Planktonic Diversity Well Recorded in Sedimentary DNA? Toward the Reconstruction of Past Protistan Diversity
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Extracellular DNA in soil and sediment: fate and ecological relevance
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Early detection of a highly invasive bivalve based on environmental DNA (eDNA)
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Understanding the effects of biotic and abiotic factors on sources of aquatic environmental DNA
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Sedimentary and egg-bank DNA from 3 European lakes reveal concurrent changes in the composition and diversity of cyanobacterial and Daphnia communities
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Late Holocene changes in cyanobacterial community structure in maritime Antarctic lakes
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Amplification of DNA in sediment cores to detect historic Planktothrix occurrence in three Norwegian lakes
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Temporal trends in cyanobacteria revealed through DNA and pigment analyses of temperate lake sediment cores
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DNA-based methods in paleolimnology: new opportunities for investigating long-term dynamics of lacustrine biodiversity
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The effect of temperature on environmental DNA degradation of Japanese eel
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Taxonomy of Toxic Cyanophyceae (Cyanobacteria)
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Quantifying effects of UV-B, temperature, and pH on eDNA degradation in aquatic microcosms
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Effects of low-molecular-weight organic ligands and phosphate on DNA adsorption by soil colloids and minerals
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Quantifying the degradation of organic matter in marine sediments: A review and synthesis
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Responses of cyanobacteria to climate and human activities at Lake Chenghai over the past 100 years
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Combined DNA and lipid analyses of sediments reveal changes in Holocene haptophyte and diatom populations in an Antarctic lake
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Dynamics and short-term survival of toxic cyanobacteria species in ballast water from NOBOB vessels transiting the Great Lakes—implications for HAB invasions
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Using a lake sediment record to infer the long-term history of cyanobacteria and the recent rise of an anatoxin producing Dolichospermum sp.
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Sedimentary DNA record of eukaryotic algal and cyanobacterial communities in a shallow Lake driven by human activities and climate change
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Using digital flow cytometry to assess the degradation of three cyanobacteria species after oxidation processes
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Fine structure of the mucilaginous sheath of Anabaena sp.
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Mechanism of Retarded DNA Degradation and Prokaryotic Origin of DNases in Nonsterile Soils
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S-layers on cell walls of cyanobacteria
inferredcites →https://doi.org/10.1021/acs.est.5b05672openalex-snapshot
Effects of Temperature and Trophic State on Degradation of Environmental DNA in Lake Water
inferredcites →https://doi.org/10.1021/acs.est.8b01071openalex-snapshot
Does Size Matter? An Experimental Evaluation of the Relative Abundance and Decay Rates of Aquatic Environmental DNA
inferredcites →https://doi.org/10.1021/acs.est.8b04956openalex-snapshot
A Microcosm Study of Surface Sediment Environmental DNA: Decay Observation, Abundance Estimation, and Fragment Length Comparison
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Quantification of Toxic Microcystis spp. during the 2003 and 2004 Blooms in Western Lake Erie using Quantitative Real-Time PCR
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Environmental Conditions Influence eDNA Persistence in Aquatic Systems
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The History of Recent Limnological Changes and Human Impact on Upper Klamath Lake, Oregon
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Ancient DNA derived from alkenone‐biosynthesizing haptophytes and other algae in Holocene sediments from the Black Sea
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Microbial DNA records historical delivery of anthropogenic mercury
inferredcites →https://doi.org/10.1038/ncomms4211openalex-snapshot
Long livestock farming history and human landscape shaping revealed by lake sediment DNA
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Climate oscillations reflected within the microbiome of Arabian Sea sediments
inferredcites →https://doi.org/10.1038/s41598-018-27368-3openalex-snapshot
Evaluation of droplet digital PCR and next generation sequencing for characterizing DNA reference material for KRAS mutation detection
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Holocene life and microbiome profiling in ancient tropical Lake Chalco, Mexico
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Tansley Review No. 107. Heterocyst and akinete differentiation in cyanobacteria
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Intracellular phosphorus metabolism of Microcystis aeruginosa under various redox potential in darkness
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Differences in Responses to Darkness betweenMicrocystis aeruginosaandChlorella pyrenoidosa
inferredcites →https://doi.org/10.1080/10402381.2018.1549625openalex-snapshot
Contrasting histories of microcystin-producing cyanobacteria in two temperate lakes as inferred from quantitative sediment DNA analyses
inferredcites →https://doi.org/10.1098/rstb.2013.0383openalex-snapshot
Ancient and modern environmental DNA
inferredcites →https://doi.org/10.1099/00207713-51-2-513openalex-snapshot
Molecular characterization of planktic cyanobacteria of Anabaena, Aphanizomenon, Microcystis and Planktothrix genera.
inferredcites →https://doi.org/10.1104/pp.103.3.971openalex-snapshot
Dark Heterotrophic Growth Conditions Result in an Increase in the Content of Photosystem II Units in the Filamentous Cyanobacterium Anabaena variabilis ATCC 29413
inferredcites →https://doi.org/10.1111/1755-0998.12685openalex-snapshot
Rapid degradation of longer DNA fragments enables the improved estimation of distribution and biomass using environmental DNA
inferredcites →https://doi.org/10.1111/aji.13807openalex-snapshot
Limit of blank, limit of detection and limit of quantitation.
inferredcites →https://doi.org/10.1111/brv.12338openalex-snapshot
The long‐term persistence of phytoplankton resting stages in aquatic ‘seed banks’
inferredcites →https://doi.org/10.1111/ele.12420openalex-snapshot
Acceleration of cyanobacterial dominance in north temperate‐subarctic lakes during the Anthropocene
inferredcites →https://doi.org/10.1111/gbi.12338openalex-snapshot
Holocene paleodepositional changes reflected in the sedimentary microbiome of the Black Sea
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Damage and degradation rates of extracellular DNA in marine sediments: implications for the preservation of gene sequences
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Preservation, origin and genetic imprint of extracellular DNA in permanently anoxic deep-sea sediments
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217 000‐year‐old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment
inferredcites →https://doi.org/10.1111/j.1462-2920.2008.01601.xopenalex-snapshot
Sources for sedimentary bacteriohopanepolyols as revealed by 16S rDNA stratigraphy
inferredcites →https://doi.org/10.1111/j.1462-5822.2011.01655.xopenalex-snapshot
Outer membrane continuity and septosome formation between vegetative cells in the filaments of Anabaena sp. PCC 7120
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Reconciling the incompatible: N2fixation And O2
inferredcites →https://doi.org/10.1111/j.1472-4669.2011.00290.xopenalex-snapshot
Preservation potential of ancient plankton DNA in Pleistocene marine sediments
inferredcites →https://doi.org/10.1111/mec.12979openalex-snapshot
Application of ancient DNA to the reconstruction of past microbial assemblages and for the detection of toxic cyanobacteria in subtropical freshwater ecosystems
inferredcites →https://doi.org/10.1111/nph.14199openalex-snapshot
Lake sedimentary DNA accurately records 20th Century introductions of exotic conifers in Scotland
inferredcites →https://doi.org/10.1126/sciadv.1601897openalex-snapshot
Hypoxia causes preservation of labile organic matter and changes seafloor microbial community composition (Black Sea)
inferredcites →https://doi.org/10.1126/science.1117475openalex-snapshot
Extracellular DNA Plays a Key Role in Deep-Sea Ecosystem Functioning
inferredcites →https://doi.org/10.1128/aem.02174-16openalex-snapshot
Sedimentary DNA Reveals Cyanobacterial Community Diversity over 200 Years in Two Perialpine Lakes
inferredcites →https://doi.org/10.1128/aem.06106-11openalex-snapshot
Quantitative PCR Enumeration of Total/Toxic Planktothrix rubescens and Total Cyanobacteria in Preserved DNA Isolated from Lake Sediments
inferredcites →https://doi.org/10.1128/aem.62.2.316-322.1996openalex-snapshot
DNA recovery from soils of diverse composition
inferredcites →https://doi.org/10.1128/aem.63.8.3327-3332.1997openalex-snapshot
PCR primers to amplify 16S rRNA genes from cyanobacteria
inferredcites →https://doi.org/10.1128/aem.64.11.4513-4521.1998openalex-snapshot
Analysis of Subfossil Molecular Remains of Purple Sulfur Bacteria in a Lake Sediment
inferredcites →https://doi.org/10.1128/jb.182.5.1191-1199.2000openalex-snapshot
Cyanobacterial Cell Walls: News from an Unusual Prokaryotic Envelope
inferredcites →https://doi.org/10.1128/mmbr.56.2.340-373.1992openalex-snapshot
Oxygen relations of nitrogen fixation in cyanobacteria
inferredcites →https://doi.org/10.1186/1471-2180-1-4openalex-snapshot
Envelope structure of Synechococcus sp. WH8113, a nonflagellated swimming cyanobacterium
inferredcites →https://doi.org/10.1371/journal.pone.0183371openalex-snapshot
Is the detection of aquatic environmental DNA influenced by substrate type?
inferredcites →https://doi.org/10.1373/clinchem.2013.206359openalex-snapshot
Multiplex Picodroplet Digital PCR to Detect KRAS Mutations in Circulating DNA from the Plasma of Colorectal Cancer Patients
inferredcites →https://doi.org/10.20381/ruor-24401openalex-snapshot
Temporal Trends in Cyanobacteria Through Paleo-Genetic Analyses
inferredcites →https://doi.org/10.3354/ame044165openalex-snapshot
Aggregation with clay causes sedimentation of the buoyant cyanobacteria Microcystis spp.
inferredcites →https://doi.org/10.3389/fmars.2018.00322openalex-snapshot
Advantages and Limitations of Environmental DNA/RNA Tools for Marine Biosecurity: Management and Surveillance of Non-indigenous Species
inferredcites →https://doi.org/10.3389/fmicb.2021.669910openalex-snapshot
Comparing Quantitative Methods for Analyzing Sediment DNA Records of Cyanobacteria in Experimental and Reference Lakes
inferredcites →https://doi.org/10.3390/ijerph16183339openalex-snapshot
Effects of Microbial Activity and Environmental Parameters on the Degradation of Extracellular Environmental DNA from a Eutrophic Lake
inferredcites →https://doi.org/10.3390/microorganisms9081778openalex-snapshot
From Water into Sediment—Tracing Freshwater Cyanobacteria via DNA Analyses
inferredcites →https://doi.org/10.3390/quat4010006openalex-snapshot
Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations
inferredcites →https://doi.org/10.3390/toxins12090580openalex-snapshot
Is a Central Sediment Sample Sufficient? Exploring Spatial and Temporal Microbial Diversity in a Small Lake
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The abundance and composition of freshwater picocyanobacteria in relation to light penetration
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DNA from lake sediments reveals the long-term dynamics and diversity of Synechococcus assemblages

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

inferred← citeshttps://doi.org/10.2139/ssrn.4780901openalex-extracted
Deciphering the Chronological and Spatial Dynamics of Azolla Invasion in Dal Lake, Srinagar: Insights from Time-Series Analysis with Edna and 210pb/137cs Dating
inferred← citeshttps://doi.org/10.1002/edn3.577openalex-snapshot
Glimpse of past dynamics: A new set of phytoplankton primers for sedaDNA
inferred← citeshttps://doi.org/10.1002/lom3.10694openalex-snapshot
Extending monitoring with sediment archive approaches: Comparison of biomonitoring, metabarcoding, and biomarkers to assess past phytoplankton dynamics
inferred← citeshttps://doi.org/10.1007/978-3-031-43799-1_2openalex-snapshot
The Sources and Fates of Lake Sedimentary DNA
inferred← citeshttps://doi.org/10.1007/978-3-031-43799-1_5openalex-snapshot
Cyanobacterial DNA from Lake Sediments
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Enrichment methodology for target algal species using reaction kinetics: A case study of Limnothrix sp.
inferred← citeshttps://doi.org/10.1016/j.hal.2023.102563openalex-snapshot
A paleoecological investigation of recent cyanobacterial blooms and their drivers in two contrasting lakes
inferred← citeshttps://doi.org/10.1016/j.hal.2026.103089openalex-snapshot
Paleolimnology uncovers environmental drivers of cyanobacterial blooms, species shifts and toxin emergence
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Reconstructing historical time-series of cyanobacteria in lake sediments: Integrating technological innovation to enhance cyanobacterial management
inferred← citeshttps://doi.org/10.1016/j.jglr.2025.102579openalex-snapshot
Sedimentary recorded nitrogen-transforming microbes reflect climate fluctuations in a glacial lake on the Qinghai-Tibetan Plateau over a millennium timescale
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Meiofaunal diversity across a sharp gradient of fjord oxygenation: Insights from metabarcoding and morphology approaches in foraminifera
inferred← citeshttps://doi.org/10.1016/j.quaint.2025.109899openalex-snapshot
Effects of Lateglacial and Holocene climate change on southern Baltic environments: a plant sedaDNA and diatom sediment record
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Unveiling the trifecta of cyanobacterial quorum sensing: LuxI, LuxR and LuxS as the intricate machinery for harmful algal bloom formation in freshwater ecosystems
inferred← citeshttps://doi.org/10.1038/s43247-023-00829-yopenalex-snapshot
Spatial distribution of sedimentary DNA is taxon-specific and linked to local occurrence at intra-lake scale
inferred← citeshttps://doi.org/10.1038/s43247-025-02701-7openalex-snapshot
Both redox potential and climate control molecular proxies in Icelandic Holocene lake sediments
inferred← citeshttps://doi.org/10.1038/s43247-025-03001-wopenalex-snapshot
Foraminiferal environmental DNA reveals late Holocene sea-level changes
inferred← citeshttps://doi.org/10.1098/rstb.2024.0032openalex-snapshot
Using sedimentary ancient DNA in coastal and marine contexts to explore past human–environmental interactions in Australia
inferred← citeshttps://doi.org/10.1111/1755-0998.13903openalex-snapshot
Evaluating the use of lake sedimentary DNA in palaeolimnology: A comparison with long‐term microscopy‐based monitoring of the phytoplankton community
inferred← citeshttps://doi.org/10.1111/fwb.14074openalex-snapshot
Long‐term cyanobacterial dynamics from lake sediment DNA in relation to experimental eutrophication, acidification and climate change
inferred← citeshttps://doi.org/10.1111/jeu.12975openalex-snapshot
Through the e DNA looking glass: Responses of fjord benthic foraminiferal communities to contrasting environmental conditions
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