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Comparative analysis of zooplankton diversity in freshwaters: What can we gain from metagenomic analysis?
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What this work says
Outgoing claims: the papers this work cites, builds on, or argues with.
inferredcites →https://doi.org/10.1002/cpbi.51openalex-snapshot
Non‐Coding RNA Analysis Using the Rfam Database
inferredcites →https://doi.org/10.1002/lno.11382openalex-snapshot
Linking metagenomics to aquatic microbial ecology and biogeochemical cycles
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Tracking Environmental Change Using Lake Sediments
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A Design Framework for Instrumenting Analytic Provenance for Problem-Solving Tasks
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Ecologically meaningful transformations for ordination of species data
inferredcites →https://doi.org/10.1007/s10592-015-0775-4openalex-snapshot
The ecology of environmental DNA and implications for conservation genetics
inferredcites →https://doi.org/10.1007/s11157-019-09501-4openalex-snapshot
A review on the applications and recent advances in environmental DNA (eDNA) metagenomics
inferredcites →https://doi.org/10.1016/j.cub.2021.06.023openalex-snapshot
Genome-scale sequencing and analysis of human, wolf, and bison DNA from 25,000-year-old sediment
inferredcites →https://doi.org/10.1016/j.ecolind.2020.106973openalex-snapshot
Target enrichment of metazoan mitochondrial DNA with hybridization capture probes
inferredcites →https://doi.org/10.1016/j.ecolind.2021.107700openalex-snapshot
Multi-trophic level responses to environmental stressors over the past ~150 years: Insights from a lake-rich region of the world
inferredcites →https://doi.org/10.1016/j.envint.2019.105230openalex-snapshot
eDNA metabarcoding in zooplankton improves the ecological status assessment of aquatic ecosystems
inferredcites →https://doi.org/10.1016/j.margen.2017.11.003openalex-snapshot
Metagenomic sequencing of environmental DNA reveals marine faunal assemblages from the West Antarctic Peninsula
inferredcites →https://doi.org/10.1016/j.scitotenv.2019.133668openalex-snapshot
The NSERC Canadian Lake Pulse Network: A national assessment of lake health providing science for water management in a changing climate
inferredcites →https://doi.org/10.1016/j.tree.2011.11.010openalex-snapshot
Sequencing our way towards understanding global eukaryotic biodiversity
inferredcites →https://doi.org/10.1016/j.tree.2014.04.003openalex-snapshot
Environmental DNA for wildlife biology and biodiversity monitoring
inferredcites →https://doi.org/10.1021/acs.est.7b01518openalex-snapshot
Predicting the Ecological Quality Status of Marine Environments from eDNA Metabarcoding Data Using Supervised Machine Learning
inferredcites →https://doi.org/10.1021/es404734popenalex-snapshot
Environmental Conditions Influence eDNA Persistence in Aquatic Systems
inferredcites →https://doi.org/10.1038/nature11148openalex-snapshot
Biodiversity loss and its impact on humanity
inferredcites →https://doi.org/10.1038/nature19085openalex-snapshot
Postglacial viability and colonization in North America’s ice-free corridor
inferredcites →https://doi.org/10.1038/nbt.3935openalex-snapshot
Shotgun metagenomics, from sampling to analysis
inferredcites →https://doi.org/10.1038/nrg1709openalex-snapshot
Metagenomics: DNA sequencing of environmental samples
inferredcites →https://doi.org/10.1038/nrmicro1747openalex-snapshot
Microbial structuring of marine ecosystems
inferredcites →https://doi.org/10.1038/s41559-016-0004openalex-snapshot
Population characteristics of a large whale shark aggregation inferred from seawater environmental DNA
inferredcites →https://doi.org/10.1038/s41598-017-12501-5openalex-snapshot
Ecosystem biomonitoring with eDNA: metabarcoding across the tree of life in a tropical marine environment
inferredcites →https://doi.org/10.1038/s41598-019-40055-1openalex-snapshot
Asymmetric paralog evolution between the “cryptic” gene Bmp16 and its well-studied sister genes Bmp2 and Bmp4
inferredcites →https://doi.org/10.1073/pnas.1720115115openalex-snapshot
Earth BioGenome Project: Sequencing life for the future of life
inferredcites →https://doi.org/10.1093/bioinformatics/btt509openalex-snapshot
Infernal 1.1: 100-fold faster RNA homology searches
inferredcites →https://doi.org/10.1093/bioinformatics/btt593openalex-snapshot
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
inferredcites →https://doi.org/10.1093/bioinformatics/btu170openalex-snapshot
Trimmomatic: a flexible trimmer for Illumina sequence data
inferredcites →https://doi.org/10.1093/icesjms/fsab084openalex-snapshot
Comparative analysis of zooplankton diversities and compositions estimated from complement DNA and genomic DNA amplicons, metatranscriptomics, and morphological identifications
inferredcites →https://doi.org/10.1093/nar/gkz1035openalex-snapshot
MGnify: the microbiome analysis resource in 2020
inferredcites →https://doi.org/10.1101/2020.03.16.993667openalex-snapshot
The utility of a metagenomics approach for marine biomonitoring
inferredcites →https://doi.org/10.1111/1755-0998.12899openalex-snapshot
The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding
inferredcites →https://doi.org/10.1111/1755-0998.13069openalex-snapshot
Terrestrial mammal surveillance using hybridization capture of environmental DNA from African waterholes
inferredcites →https://doi.org/10.1111/1755-0998.13506openalex-snapshot
Using metatranscriptomics to estimate the diversity and composition of zooplankton communities
inferredcites →https://doi.org/10.1111/2041-210x.12849openalex-snapshot
Scrutinizing key steps for reliable metabarcoding of environmental samples
inferredcites →https://doi.org/10.1111/j.1365-294x.2011.05418.xopenalex-snapshot
Monitoring endangered freshwater biodiversity using environmental DNA
inferredcites →https://doi.org/10.1111/jbi.14153openalex-snapshot
Multi‐scale biodiversity analyses identify the importance of continental watersheds in shaping lake zooplankton biogeography
inferredcites →https://doi.org/10.1111/mec.13481openalex-snapshot
Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental DNA
inferredcites →https://doi.org/10.1111/mec.13660openalex-snapshot
Environmental DNA metabarcoding of lake fish communities reflects long‐term data from established survey methods
inferredcites →https://doi.org/10.1111/mec.14350openalex-snapshot
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
inferredcites →https://doi.org/10.1111/mec.15472openalex-snapshot
Ecosystems monitoring powered by environmental genomics: A review of current strategies with an implementation roadmap
inferredcites →https://doi.org/10.1111/mec.15643openalex-snapshot
Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring
inferredcites →https://doi.org/10.1111/mec.15942openalex-snapshot
Trade‐offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on “Environmental DNA: What's behind the term?” by Pawlowski et al., (2020)
inferredcites →https://doi.org/10.1111/mec.16364openalex-snapshot
Meta‐analysis shows both congruence and complementarity of DNA and eDNA metabarcoding to traditional methods for biological community assessment
inferredcites →https://doi.org/10.1126/science.331.6023.1386openalex-snapshot
Creating a Buzz About Insect Genomes
inferredcites →https://doi.org/10.1128/msphere.00052-20openalex-snapshot
Bacterial and Eukaryotic Small-Subunit Amplicon Data Do Not Provide a Quantitative Picture of Microbial Communities, but They Are Reliable in the Context of Ecological Interpretations
inferredcites →https://doi.org/10.1139/cjfas-2021-0073openalex-snapshot
The alarming state of freshwater biodiversity in Canada
inferredcites →https://doi.org/10.1371/journal.pcbi.1004721openalex-snapshot
Investigating the Consequences of Interference between Multiple CD8+ T Cell Escape Mutations in Early HIV Infection
inferredcites →https://doi.org/10.1371/journal.pcbi.1004957openalex-snapshot
MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data
inferredcites →https://doi.org/10.1371/journal.pone.0017497openalex-snapshot
Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos
inferredcites →https://doi.org/10.1371/journal.pone.0088786openalex-snapshot
Transport Distance of Invertebrate Environmental DNA in a Natural River
inferredcites →https://doi.org/10.17118/11143/18662openalex-snapshot
NSERC Canadian Lake Pulse Network field manual 2017 - 2018 - 2019 surveys
inferredcites →https://doi.org/10.18637/jss.v025.i01openalex-snapshot
FactoMineR : An R Package for Multivariate Analysis
inferredcites →https://doi.org/10.1899/08-171.1openalex-snapshot
Freshwater biodiversity conservation: recent progress and future challenges
inferredcites →https://doi.org/10.32614/r.manualsopenalex-snapshot
R: A Language and Environment for Statistical Computing
inferredcites →https://doi.org/10.3389/fmars.2016.00096openalex-snapshot
Benchmarking DNA Metabarcoding for Biodiversity-Based Monitoring and Assessment
inferredcites →https://doi.org/10.3390/w13081113openalex-snapshot
Towards the Optimization of eDNA/eRNA Sampling Technologies for Marine Biosecurity Surveillance
inferredcites →https://doi.org/10.3897/aca.4.e64864openalex-snapshot
A Novel Metagenomic Workflow for Biomonitoring across the Tree of Life using PCR-free Ultra-deep Sequencing of Extracellular eDNA
inferredcites →https://doi.org/10.3897/mbmg.4.48281openalex-snapshot
Estimation of the relative abundance of species in artificial mixtures of insects using low-coverage shotgun metagenomics
inferredcites →https://doi.org/10.3897/mycokeys.10.4852openalex-snapshot
Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi
inferredcites →https://doi.org/10.5670/oceanog.2020.211openalex-snapshot
The Potential of Sedimentary Ancient DNA to Reconstruct Past Ocean Ecosystems
What points at this work
Incoming claims: where this work appears in other papers’ reference lists and arguments.
inferred← citeshttps://doi.org/10.3897/mbmg.8.119614zenodo-depositor-declared
Net type, tow duration and day/night sampling effects on the composition of marine zooplankton derived from metabarcoding
inferred← citeshttps://doi.org/10.1002/agg2.70169openalex-snapshot
Microbial diversity and function in the rhizosphere microbiome: Driving forces and monitoring approaches
inferred← citeshttps://doi.org/10.1007/978-3-031-43799-1_9openalex-snapshot
Aquatic Animal DNA from Lake Sediments
inferred← citeshttps://doi.org/10.1007/s11356-023-25195-2openalex-snapshot
Bacterial diversity in the aquatic system in India based on metagenome analysis—a critical review
inferred← citeshttps://doi.org/10.1016/j.envpol.2026.127652openalex-snapshot
Complementary strengths of eDNA and morphology in assessing chemical stress on freshwater plankton communities: Evidence from mesocosm experiments
inferred← citeshttps://doi.org/10.1016/j.marpolbul.2026.120341openalex-snapshot
Community-level eDNA decay patterns in marine zooplankton: Implications for optimizing eDNA-based marine environmental monitoring
inferred← citeshttps://doi.org/10.1073/pnas.2622864123openalex-snapshot
Rewriting the history of the invasive spiny water flea in North America
inferred← citeshttps://doi.org/10.1111/mec.17152openalex-snapshot
Environmental transcriptomics under heat stress: Can environmental RNA reveal changes in gene expression of aquatic organisms?
inferred← citeshttps://doi.org/10.1186/s12866-025-04536-wopenalex-snapshot
Interactions between phytoplankton and bacterioplankton communities in Caohai plateau lake, revealed by environmental DNA metagenomics
inferred← citeshttps://doi.org/10.1186/s43141-023-00601-xopenalex-snapshot
Metagenomic analysis reveals diverse microbial community and potential functional roles in Baner rivulet, India
inferred← citeshttps://doi.org/10.18307/2025.0405openalex-snapshot
Responses of phytoplankton communities to human activities in Lake Caohai Wetland based on environmental DNA metagenome
inferred← citeshttps://doi.org/10.22541/essoar.167287040.04332426/v1openalex-snapshot
Tracking aquatic animals with sediment DNA records
inferred← citeshttps://doi.org/10.3390/su151410950openalex-snapshot
Current Utilization and Further Application of Zooplankton Indices for Ecosystem Health Assessment of Lake Ecosystems
inferred← citeshttps://doi.org/10.7717/peerj.19158openalex-snapshot
Advancing molecular macrobenthos biodiversity monitoring: a comparison between Oxford Nanopore and Illumina based metabarcoding and metagenomics
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