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Evaluation of stereo-array isotope labeling (SAIL) patterns for automated structural analysis of proteins with CYANA

https://doi.org/10.1002/mrc.1815
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1006/jmbi.1997.1284openalex-snapshot
Torsion angle dynamics for NMR structure calculation with the new program Dyana
inferredcites →https://doi.org/10.1007/bf01875516openalex-snapshot
A relational database for sequence-specific protein NMR data
inferredcites →https://doi.org/10.1016/0022-2836(88)90608-0openalex-snapshot
Structure of calmodulin refined at 2.2 Å resolution
inferredcites →https://doi.org/10.1016/j.jmb.2003.09.014openalex-snapshot
NMR Structure of the Integral Membrane Protein OmpX
inferredcites →https://doi.org/10.1016/s0022-2836(02)00241-3openalex-snapshot
Protein NMR Structure Determination with Automated NOE Assignment Using the New Software CANDID and the Torsion Angle Dynamics Algorithm DYANA
inferredcites →https://doi.org/10.1016/s0079-6565(03)00021-9openalex-snapshot
Automated NMR protein structure calculation
inferredcites →https://doi.org/10.1021/bi047820zopenalex-snapshot
Refined Solution Structure of the LpxC−TU-514 Complex and pKa Analysis of an Active Site Histidine: Insights into the Mechanism and Inhibitor Design,
inferredcites →https://doi.org/10.1023/a:1008392405740openalex-snapshot
Protein backbone angle restraints from searching a database for chemical shift and sequence homology
inferredcites →https://doi.org/10.1038/2983openalex-snapshot
Structure of the outer membrane protein A transmembrane domain
inferredcites →https://doi.org/10.1038/86214openalex-snapshot
Structure of outer membrane protein A transmembrane domain by NMR spectroscopy.
inferredcites →https://doi.org/10.1038/nature04525openalex-snapshot
Optimal isotope labelling for NMR protein structure determinations
inferredcites →https://doi.org/10.1038/nsb948openalex-snapshot
Structure of the LpxC deacetylase with a bound substrate-analog inhibitor
inferredcites →https://doi.org/10.1073/pnas.1432990100openalex-snapshot
Crystal structure of LpxC, a zinc-dependent deacetylase essential for endotoxin biosynthesis
inferredcites →https://doi.org/10.1093/nar/28.1.235openalex-snapshot
The Protein Data Bank
inferredcites →https://doi.org/10.1107/s0108767391001071openalex-snapshot
Accurate bond and angle parameters for X-ray protein structure refinement

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Structural and Functional Analysis of the Repeat Sequence (Mmmkpd) in Lmp from the Hinge Ligament of Pinctada Fucata Using Solution Nmr with Calcium Carbonate Nanoparticles
inferred← citeshttps://doi.org/10.1002/9781119972006.ch2openalex-snapshot
Isotope Labelling
inferred← citeshttps://doi.org/10.1002/ange.200801275openalex-snapshot
Preise der Chemischen Gesellschaft Japans (CSJ)
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Prizes of the Chemical Society of Japan (CSJ)
inferred← citeshttps://doi.org/10.1002/cbic.202300554openalex-snapshot
Structural Analyses of DP‐1, a Protein with the Ability To Bind Gold Nanoparticles, by Using Nuclear Magnetic Resonance Spectroscopy
inferred← citeshttps://doi.org/10.1002/cmr.a.20103openalex-snapshot
Metabolic labeling: Taking advantage of bacterial pathways to prepare spectroscopically useful isotope patterns in proteins and nucleic acids
inferred← citeshttps://doi.org/10.1002/mrc.1813openalex-snapshot
Fully automated structure determinations of the Fes SH2 domain using different sets of NMR spectra
inferred← citeshttps://doi.org/10.1002/mrm.22277openalex-snapshot
Unambiguous assignment of the H3Sand H3Rdeuterations of cerebral (2-13C) glutamate by13C NMR at 18.8 tesla
inferred← citeshttps://doi.org/10.1007/978-94-007-4954-2_5openalex-snapshot
Stereo-Array Isotope Labeling Method for Studying Protein Structure and Dynamics
inferred← citeshttps://doi.org/10.1007/s10858-009-9339-6openalex-snapshot
Automated NMR structure determination of stereo-array isotope labeled ubiquitin from minimal sets of spectra using the SAIL-FLYA system
inferred← citeshttps://doi.org/10.1016/b978-0-12-374920-8.00116-8openalex-snapshot
1.12 Labeling Techniques
inferred← citeshttps://doi.org/10.1016/j.bbamem.2020.183356openalex-snapshot
Solution NMR spectroscopy of membrane proteins
inferred← citeshttps://doi.org/10.1016/j.jmr.2013.10.021openalex-snapshot
Information-driven modeling of large macromolecular assemblies using NMR data
inferred← citeshttps://doi.org/10.1016/j.peptides.2015.11.001openalex-snapshot
The radish defensins RsAFP1 and RsAFP2 act synergistically with caspofungin against Candida albicans biofilms
inferred← citeshttps://doi.org/10.1016/j.pnmrs.2007.03.002openalex-snapshot
Structure-based profiling of metabolites and isotopomers by NMR
inferred← citeshttps://doi.org/10.1016/j.pnmrs.2008.01.003openalex-snapshot
Stable isotope labeling methods for protein NMR spectroscopy
inferred← citeshttps://doi.org/10.1017/s0033583510000016openalex-snapshot
SAIL – stereo-array isotope labeling
inferred← citeshttps://doi.org/10.1017/s0033583510000326openalex-snapshot
Advances in automated NMR protein structure determination
inferred← citeshttps://doi.org/10.1021/acs.biomac.5c00916openalex-snapshot
A Methionine-Rich Repeat Forms a Spiral Conformation That Guides Aragonite Nanofiber Organization in Molluscan Ligaments
inferred← citeshttps://doi.org/10.1021/acs.cgd.3c00467openalex-snapshot
Structural and Functional Analyses of the Acidic and Basic Amino Acid Repeat Sequence (DDRK) in Pif 80 from Pinctada fucata on the Aragonite Crystal Surface Using NMR
inferred← citeshttps://doi.org/10.1021/acs.jmedchem.4c00735openalex-snapshot
Design, Synthesis, and Structure–Activity Relationships of Novel Peptide Derivatives of the Severe Acute Respiratory Syndrome-Coronavirus-2 Spike-Protein that Potently Inhibit Nicotinic Acetylcholine Receptors
inferred← citeshttps://doi.org/10.1021/acs.langmuir.3c03820openalex-snapshot
Structural and Functional Analysis of the Amorphous Calcium Carbonate-Binding Protein Paramyosin in the Shell of the Pearl Oyster, Pinctada fucata
inferred← citeshttps://doi.org/10.1021/ja061136lopenalex-snapshot
Automated Protein Structure Determination from NMR Spectra
inferred← citeshttps://doi.org/10.1021/np900174nopenalex-snapshot
Isolation and Characterization of Peptides from Momordica cochinchinensis Seeds
inferred← citeshttps://doi.org/10.1038/nprot.2007.423openalex-snapshot
Automated structure determination of proteins with the SAIL-FLYA NMR method
inferred← citeshttps://doi.org/10.1039/d4ce01253dopenalex-snapshot
Conformational analysis of biomineral proteins interacting with inorganic minerals using dispersive mineral particles for solution NMR
inferred← citeshttps://doi.org/10.1039/d6cp02217kopenalex-snapshot
Conformational analysis of an SRCRD-derived peptide on hydroxyapatite surfaces using dispersive calcium phosphate particles
inferred← citeshttps://doi.org/10.1042/bsr20130052openalex-snapshot
Functional evolution of scorpion venom peptides with an inhibitor cystine knot fold
inferred← citeshttps://doi.org/10.1073/pnas.1503617112openalex-snapshot
Cloning, synthesis, and characterization of αO-conotoxin GeXIVA, a potent α9α10 nicotinic acetylcholine receptor antagonist
inferred← citeshttps://doi.org/10.1074/jbc.m113.524009openalex-snapshot
Solution NMR Structure of the DNA-binding Domain from Scml2 (Sex Comb on Midleg-like 2)
inferred← citeshttps://doi.org/10.1074/jbc.m117.808386openalex-snapshot
Backbone cyclization of analgesic conotoxin GeXIVA facilitates direct folding of the ribbon isomer
inferred← citeshttps://doi.org/10.1074/jbc.ra118.005649openalex-snapshot
Molecular determinants of α-conotoxin potency for inhibition of human and rat α6β4 nicotinic acetylcholine receptors
inferred← citeshttps://doi.org/10.1080/00268976.2013.783639openalex-snapshot
Perspectives of solution NMR spectroscopy for structural and functional studies of integral membrane proteins
inferred← citeshttps://doi.org/10.1093/bbb/zbaf150openalex-snapshot
Conformational analysis of biomineral proteins with intrinsically disordered regions interacting with solid calcium carbonate using dispersive calcium carbonate particles for solution NMR
inferred← citeshttps://doi.org/10.1105/tpc.112.099085openalex-snapshot
Cyclic Peptides Arising by Evolutionary Parallelism via Asparaginyl-Endopeptidase–Mediated Biosynthesis
inferred← citeshttps://doi.org/10.1182/blood-2011-06-359141openalex-snapshot
Engineering pro-angiogenic peptides using stable, disulfide-rich cyclic scaffolds
inferred← citeshttps://doi.org/10.1371/journal.pone.0075334openalex-snapshot
Novel Inhibitor Cystine Knot Peptides from Momordica charantia
inferred← citeshttps://doi.org/10.1371/journal.pone.0132701openalex-snapshot
Synergistic Activity of the Plant Defensin HsAFP1 and Caspofungin against Candida albicans Biofilms and Planktonic Cultures
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