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Docking and scoring with alternative side‐chain conformations

https://doi.org/10.1002/prot.22189
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

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Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function
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Effect of ligand volume correction on PMF scoring
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Knowledge-based scoring function to predict protein-ligand interactions
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The computer program LUDI: A new method for the de novo design of enzyme inhibitors
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Molecular recognition of the inhibitor AG-1343 by HIV-1 protease: conformationally flexible docking by evolutionary programming
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Ligand-supported Homology Modelling of Protein Binding-sites using Knowledge-based Potentials
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Testing a Flexible-receptor Docking Algorithm in a Model Binding Site
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LigScore: a novel scoring function for predicting binding affinities
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inferredcites →https://doi.org/10.1023/a:1011115820450openalex-snapshot
DOCK 4.0: Search strategies for automated molecular docking of flexible molecule databases
inferredcites →https://doi.org/10.1023/a:1016357811882openalex-snapshot
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inferredcites →https://doi.org/10.1038/nsb0295-163openalex-snapshot
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inferredcites →https://doi.org/10.1110/ps.2830102openalex-snapshot
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inferredcites →https://doi.org/10.1126/science.1065659openalex-snapshot
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inferredcites →https://doi.org/10.1145/362342.362367openalex-snapshot
Algorithm 457: finding all cliques of an undirected graph

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Incoming claims: where this work appears in other papers’ reference lists and arguments.

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