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FOUNDATION: A program to retrieve all possible structures containing a user-defined minimum number of matching query elements from three-dimensional databases

https://doi.org/10.1007/bf00141572
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What this work says

Outgoing claims: the papers this work cites, builds on, or argues with.

inferredcites →https://doi.org/10.1002/9780470125786openalex-snapshot
Reviews in Computational Chemistry
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Searching Databases of Three‐Dimensional Structures
inferredcites →https://doi.org/10.1002/jcc.540050105openalex-snapshot
A combinatorial algorithm for calculating ligand binding
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Computer design of bioactive molecules: A method for receptor‐based de novo ligand design
inferredcites →https://doi.org/10.1007/978-3-642-66626-1_4openalex-snapshot
Three-Dimensional Pharmacophoric Pattern Searching
inferredcites →https://doi.org/10.1007/bf00117400openalex-snapshot
Cavity search: An algorithm for the isolation and display of cavity-like binding regions
inferredcites →https://doi.org/10.1007/bf00124387openalex-snapshot
The computer program LUDI: A new method for the de novo design of enzyme inhibitors
inferredcites →https://doi.org/10.1007/bf00129424openalex-snapshot
In search of new lead compounds for trypanosomiasis drug design: A protein structure-based linked-fragment approach
inferredcites →https://doi.org/10.1007/bf01533070openalex-snapshot
ALADDIN: An integrated tool for computer-assisted molecular design and pharmacophore recognition from geometric, steric, and substructure searching of three-dimensional molecular structures
inferredcites →https://doi.org/10.1007/bf01677047openalex-snapshot
Designing novel nicotinic agonists by searching a database of molecular shapes
inferredcites →https://doi.org/10.1007/bf02277184openalex-snapshot
A depth first search algorithm to generate the family of maximal independent sets of a graph lexicographically
inferredcites →https://doi.org/10.1016/0022-2836(82)90153-xopenalex-snapshot
A geometric approach to macromolecule-ligand interactions
inferredcites →https://doi.org/10.1016/0146-664x(82)90117-4openalex-snapshot
Fundamentals of interactive computer graphics
inferredcites →https://doi.org/10.1016/0263-7855(86)80088-1openalex-snapshot
Pharmacophoric pattern matching in files of 3-D chemical structures: selection of interatomic distance screens
inferredcites →https://doi.org/10.1016/0263-7855(86)80092-3openalex-snapshot
Central nervous system drug design
inferredcites →https://doi.org/10.1016/0263-7855(87)80044-9openalex-snapshot
Pharmacophoric pattern matching in files of 3D chemical structures: evaluation of search performance
inferredcites →https://doi.org/10.1016/0263-7855(87)80045-0openalex-snapshot
Pharmacophoric pattern matching in files of 3D chemical structures: comparison of geometric searching algorithms
inferredcites →https://doi.org/10.1016/0263-7855(92)80059-mopenalex-snapshot
Automated site-directed drug design using molecular lattices
inferredcites →https://doi.org/10.1016/s0065-7743(08)61374-3openalex-snapshot
Chapter 29 Pharmacophoric Pattern Searching and Receptor Mapping
inferredcites →https://doi.org/10.1021/ar00089a001openalex-snapshot
Systematic analysis of structural data as a research technique in organic chemistry
inferredcites →https://doi.org/10.1021/bi00400a008openalex-snapshot
Slow- and fast-binding inhibitors of thermolysin display different modes of binding: crystallographic analysis of extended phosphonamidate transition-state analogs
inferredcites →https://doi.org/10.1021/ci00003a004openalex-snapshot
Fast drug-receptor mapping by site-directed distances: a novel method of predicting new pharmacological leads
inferredcites →https://doi.org/10.1021/ci00040a009openalex-snapshot
Computer-assisted examination of compounds for common three-dimensional substructures
inferredcites →https://doi.org/10.1021/jm00090a001openalex-snapshot
3D database searching in drug design
inferredcites →https://doi.org/10.1021/jm00399a006openalex-snapshot
Using shape complementarity as an initial screen in designing ligands for a receptor binding site of known three-dimensional structure
inferredcites →https://doi.org/10.1057/jors.1991.155openalex-snapshot
Introduction to Algorithms
inferredcites →https://doi.org/10.1073/pnas.86.20.8165openalex-snapshot
Searching for pharmacophores in large coordinate data bases and its use in drug design.
inferredcites →https://doi.org/10.1073/pnas.87.17.6644openalex-snapshot
Structure-based design of nonpeptide inhibitors specific for the human immunodeficiency virus 1 protease.
inferredcites →https://doi.org/10.1107/s010876738108937xopenalex-snapshot
The Protein Data Bank
inferredcites →https://doi.org/10.1107/s0567740874002603openalex-snapshot
Some uses of a best molecular fit routine
inferredcites →https://doi.org/10.1145/359094.359095openalex-snapshot
Detection of three-dimensional patterns of atoms in chemical structures
inferredcites →https://doi.org/10.1145/362342.362367openalex-snapshot
Algorithm 457: finding all cliques of an undirected graph
inferredcites →https://doi.org/10.1147/rd.81.0022openalex-snapshot
On Some Clustering Techniques

What points at this work

Incoming claims: where this work appears in other papers’ reference lists and arguments.

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Three‐dimensional Structure Searching
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c[ D ‐pro‐Pro‐ D ‐pro‐ N ‐methyl‐Ala] adopts a rigid conformation that serves as a scaffold to mimic reverse‐turns
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DBMAKER: A set of programs to generate three-dimensional databases based upon user-specified criteria
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Flexibases: A way to enhance the use of molecular docking methods
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Structure-Based Molecular Design
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